RNA–Protein interactions for RNA: ENST00000627864.1

MECP2-216, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3

Gene MECP2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-216ENST00000627864 TMEM47Q9BQJ4 181 aa22.14■■□□□ 1.13
MECP2-216ENST00000627864 TOP1P11387 765 aaKnown RBP22.13■■□□□ 1.13
MECP2-216ENST00000627864 MAP2K2P36507 400 aa22.13■■□□□ 1.13
MECP2-216ENST00000627864 NOVP48745 357 aa22.13■■□□□ 1.13
MECP2-216ENST00000627864 EXOSC10Q01780 885 aaKnown RBP22.13■■□□□ 1.13
MECP2-216ENST00000627864 TMEM67Q5HYA8 995 aa22.13■■□□□ 1.13
MECP2-216ENST00000627864 FASTKD5Q7L8L6 764 aaKnown RBP22.13■■□□□ 1.13
MECP2-216ENST00000627864 BRI3BPQ8WY22 251 aa22.13■■□□□ 1.13
MECP2-216ENST00000627864 TCEANC2Q96MN5 208 aa22.13■■□□□ 1.13
MECP2-216ENST00000627864 LRRC2Q9BYS8 371 aa22.13■■□□□ 1.13
MECP2-216ENST00000627864 GOPCQ9HD26 462 aa22.13■■□□□ 1.13
MECP2-216ENST00000627864 EMILIN3Q9NT22 766 aa22.13■■□□□ 1.13
MECP2-216ENST00000627864 INHBEP58166 350 aa22.12■■□□□ 1.13
MECP2-216ENST00000627864 SREBF2Q12772 1141 aa22.12■■□□□ 1.13
MECP2-216ENST00000627864 MOGSQ13724 837 aa22.12■■□□□ 1.13
MECP2-216ENST00000627864 WTAPQ15007 396 aa22.12■■□□□ 1.13
MECP2-216ENST00000627864 SEC23AQ15436 765 aa22.12■■□□□ 1.13
MECP2-216ENST00000627864 IFIT1BQ5T764 474 aaKnown RBP22.12■■□□□ 1.13
MECP2-216ENST00000627864 DNAJC5GQ8N7S2 189 aa22.12■■□□□ 1.13
MECP2-216ENST00000627864 IGDCC4Q8TDY8 1250 aa22.12■■□□□ 1.13
MECP2-216ENST00000627864 ANKS1AQ92625 1134 aa22.12■■□□□ 1.13
MECP2-216ENST00000627864 TMEM87BQ96K49 555 aa22.12■■□□□ 1.13
MECP2-216ENST00000627864 TM6SF1Q9BZW5 370 aa22.12■■□□□ 1.13
MECP2-216ENST00000627864 VCPKMTQ9H867 229 aa22.12■■□□□ 1.13
MECP2-216ENST00000627864 ZSWIM6Q9HCJ5 1215 aa22.12■■□□□ 1.13
MECP2-216ENST00000627864 THSD7BQ9C0I4 1608 aa22.12■■□□□ 1.13
MECP2-216ENST00000627864 TESPA1A2RU30 521 aaPredicted RBP22.11■■□□□ 1.13
MECP2-216ENST00000627864 RPS6KB1P23443 525 aa22.11■■□□□ 1.13
MECP2-216ENST00000627864 KIAA1755Q5JYT7 1200 aa22.11■■□□□ 1.13
MECP2-216ENST00000627864 PROCA1Q8NCQ7 364 aaPredicted RBP22.11■■□□□ 1.13
MECP2-216ENST00000627864 CHMP4CQ96CF2 233 aa22.11■■□□□ 1.13
MECP2-216ENST00000627864 MTA3Q9BTC8 594 aa22.11■■□□□ 1.13
MECP2-216ENST00000627864 KAT14Q9H8E8 782 aa22.11■■□□□ 1.13
MECP2-216ENST00000627864 GPHNQ9NQX3 736 aaPredicted RBP22.11■■□□□ 1.13
MECP2-216ENST00000627864 MTMR7Q9Y216 660 aa22.11■■□□□ 1.13
MECP2-216ENST00000627864 CYP46A1Q9Y6A2 500 aa22.11■■□□□ 1.13
MECP2-216ENST00000627864 WDR19Q8NEZ3 1342 aa22.1■■□□□ 1.13
MECP2-216ENST00000627864 F5H6K3 240 aa22.1■■□□□ 1.13
MECP2-216ENST00000627864 TM4SF4P48230 202 aa22.1■■□□□ 1.13
MECP2-216ENST00000627864 RBM25P49756 843 aaKnown RBP22.1■■□□□ 1.13
MECP2-216ENST00000627864 KLRC3Q07444 240 aa22.1■■□□□ 1.13
MECP2-216ENST00000627864 RUFY3Q7L099 469 aa22.1■■□□□ 1.13
MECP2-216ENST00000627864 REM2Q8IYK8 340 aaPredicted RBP22.1■■□□□ 1.13
MECP2-216ENST00000627864 SPICE1Q8N0Z3 855 aa22.1■■□□□ 1.13
MECP2-216ENST00000627864 C12orf42Q96LP6 360 aa22.1■■□□□ 1.13
MECP2-216ENST00000627864 PTPN18Q99952 460 aa22.1■■□□□ 1.13
MECP2-216ENST00000627864 UPF3BQ9BZI7 483 aaKnown RBP22.1■■□□□ 1.13
MECP2-216ENST00000627864 SENP2Q9HC62 589 aa22.1■■□□□ 1.13
MECP2-216ENST00000627864 SYNPO2Q9UMS6 1093 aa22.1■■□□□ 1.13
MECP2-216ENST00000627864 PARP14Q460N5 1801 aa22.09■■□□□ 1.13
MECP2-216ENST00000627864 BTBD19C9JJ37 291 aa22.09■■□□□ 1.13
MECP2-216ENST00000627864 SH2B2O14492 632 aaPredicted RBP22.09■■□□□ 1.13
MECP2-216ENST00000627864 FGD1P98174 961 aa22.09■■□□□ 1.13
MECP2-216ENST00000627864 TREML2Q5T2D2 321 aa22.09■■□□□ 1.13
MECP2-216ENST00000627864 SLFN13Q68D06 897 aa22.09■■□□□ 1.13
MECP2-216ENST00000627864 GPAT2Q6NUI2 795 aa22.09■■□□□ 1.13
MECP2-216ENST00000627864 IL17RAQ96F46 866 aa22.09■■□□□ 1.13
MECP2-216ENST00000627864 IGF2BP3O00425 579 aaKnown RBP eCLIP22.08■■□□□ 1.13
MECP2-216ENST00000627864 NDUFB10O96000 172 aa22.08■■□□□ 1.13
MECP2-216ENST00000627864 VCAM1P19320 739 aa22.08■■□□□ 1.13
MECP2-216ENST00000627864 NFXL1Q6ZNB6 911 aa22.08■■□□□ 1.13
MECP2-216ENST00000627864 Q6ZUG5 572 aa22.08■■□□□ 1.13
MECP2-216ENST00000627864 ANKRD23Q86SG2 305 aa22.08■■□□□ 1.13
MECP2-216ENST00000627864 IFNL1Q8IU54 200 aa22.08■■□□□ 1.13
MECP2-216ENST00000627864 FAM43AQ8N2R8 423 aa22.08■■□□□ 1.13
MECP2-216ENST00000627864 PNMA1Q8ND90 353 aa22.08■■□□□ 1.13
MECP2-216ENST00000627864 GMCL1P1Q8NEA9 526 aa22.08■■□□□ 1.13
MECP2-216ENST00000627864 LPAR1Q92633 364 aa22.08■■□□□ 1.13
MECP2-216ENST00000627864 LY9Q9HBG7 655 aa22.08■■□□□ 1.13
MECP2-216ENST00000627864 AGTPBP1Q9UPW5 1226 aa22.08■■□□□ 1.13
MECP2-216ENST00000627864 OTUD7BQ6GQQ9 843 aa22.07■■□□□ 1.12
MECP2-216ENST00000627864 TMTC2Q8N394 836 aa22.07■■□□□ 1.12
MECP2-216ENST00000627864 TBC1D32Q96NH3 1257 aa22.07■■□□□ 1.12
MECP2-216ENST00000627864 CCDC69A6NI79 296 aa22.06■■□□□ 1.12
MECP2-216ENST00000627864 PDHXO00330 501 aa22.06■■□□□ 1.12
MECP2-216ENST00000627864 LIFRP42702 1097 aa22.06■■□□□ 1.12
MECP2-216ENST00000627864 FAM83BQ5T0W9 1011 aa22.06■■□□□ 1.12
MECP2-216ENST00000627864 NUP88Q99567 741 aaPredicted RBP22.06■■□□□ 1.12
MECP2-216ENST00000627864 RPAP3Q9H6T3 665 aaPredicted RBP22.06■■□□□ 1.12
MECP2-216ENST00000627864 PDRG1Q9NUG6 133 aa22.06■■□□□ 1.12
MECP2-216ENST00000627864 ISY1Q9ULR0 285 aaKnown RBP22.06■■□□□ 1.12
MECP2-216ENST00000627864 RLFQ13129 1914 aa22.06■■□□□ 1.12
MECP2-216ENST00000627864 USP17L15C9J2P7 530 aa22.05■■□□□ 1.12
MECP2-216ENST00000627864 USP17L13C9JLJ4 530 aa22.05■■□□□ 1.12
MECP2-216ENST00000627864 USP17L11C9JVI0 530 aa22.05■■□□□ 1.12
MECP2-216ENST00000627864 USP17L18D6R9N7 530 aa22.05■■□□□ 1.12
MECP2-216ENST00000627864 USP17L22D6RA61 530 aa22.05■■□□□ 1.12
MECP2-216ENST00000627864 USP17L17D6RBQ6 530 aa22.05■■□□□ 1.12
MECP2-216ENST00000627864 USP17L19D6RCP7 530 aa22.05■■□□□ 1.12
MECP2-216ENST00000627864 USP17L20D6RJB6 530 aa22.05■■□□□ 1.12
MECP2-216ENST00000627864 WDR46O15213 610 aaKnown RBP22.05■■□□□ 1.12
MECP2-216ENST00000627864 USP17L24Q0WX57 530 aa22.05■■□□□ 1.12
MECP2-216ENST00000627864 PABPC4Q13310 644 aaKnown RBP eCLIP22.05■■□□□ 1.12
MECP2-216ENST00000627864 KIF2CQ99661 725 aa22.05■■□□□ 1.12
MECP2-216ENST00000627864 TANGO6Q9C0B7 1094 aa22.05■■□□□ 1.12
MECP2-216ENST00000627864 BMP3P12645 472 aa22.04■■□□□ 1.12
MECP2-216ENST00000627864 OSBPP22059 807 aa22.04■■□□□ 1.12
MECP2-216ENST00000627864 SLC1A4P43007 532 aa22.04■■□□□ 1.12
MECP2-216ENST00000627864 NEK4P51957 841 aa22.04■■□□□ 1.12
MECP2-216ENST00000627864 CCDC96Q2M329 555 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms