RNA–Protein interactions for RNA: ENST00000627460.1

CHD2-211, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-211ENST00000627460 ARFGEF1Q9Y6D6 1849 aa10.01□□□□□ -0.81
CHD2-211ENST00000627460 YDJCA8MPS7 323 aa10.01□□□□□ -0.81
CHD2-211ENST00000627460 PSMD14O00487 310 aa10.01□□□□□ -0.81
CHD2-211ENST00000627460 TBC1D12O60347 775 aa10.01□□□□□ -0.81
CHD2-211ENST00000627460 PRDM1O75626 825 aa10.01□□□□□ -0.81
CHD2-211ENST00000627460 CTDNEP1O95476 244 aa10.01□□□□□ -0.81
CHD2-211ENST00000627460 TOP1P11387 765 aaKnown RBP10.01□□□□□ -0.81
CHD2-211ENST00000627460 RASA1P20936 1047 aa10.01□□□□□ -0.81
CHD2-211ENST00000627460 SMARCA1P28370 1054 aa10.01□□□□□ -0.81
CHD2-211ENST00000627460 PLCD1P51178 756 aa10.01□□□□□ -0.81
CHD2-211ENST00000627460 UBE2HP62256 183 aa10.01□□□□□ -0.81
CHD2-211ENST00000627460 GABPAQ06546 454 aa10.01□□□□□ -0.81
CHD2-211ENST00000627460 TROAPQ12815 778 aa10.01□□□□□ -0.81
CHD2-211ENST00000627460 PICALMQ13492 652 aa10.01□□□□□ -0.81
CHD2-211ENST00000627460 COL9A3Q14050 684 aaPredicted RBP10.01□□□□□ -0.81
CHD2-211ENST00000627460 CFAP100Q494V2 611 aa10.01□□□□□ -0.81
CHD2-211ENST00000627460 PNMA1Q8ND90 353 aa10.01□□□□□ -0.81
CHD2-211ENST00000627460 DPF2Q92785 391 aa10.01□□□□□ -0.81
CHD2-211ENST00000627460 HOOK2Q96ED9 719 aa10.01□□□□□ -0.81
CHD2-211ENST00000627460 GMLQ99445 158 aa10.01□□□□□ -0.81
CHD2-211ENST00000627460 ZKSCAN3Q9BRR0 538 aa10.01□□□□□ -0.81
CHD2-211ENST00000627460 ALG1Q9BT22 464 aa10.01□□□□□ -0.81
CHD2-211ENST00000627460 SAP30BPQ9UHR5 308 aaKnown RBP10.01□□□□□ -0.81
CHD2-211ENST00000627460 SYNPO2Q9UMS6 1093 aa10.01□□□□□ -0.81
CHD2-211ENST00000627460 GOLGA6L4A6NEF3 574 aa10□□□□□ -0.81
CHD2-211ENST00000627460 PRPF3O43395 683 aaKnown RBP10□□□□□ -0.81
CHD2-211ENST00000627460 SLC34A2O95436 690 aa10□□□□□ -0.81
CHD2-211ENST00000627460 CYP2D6P10635 497 aa10□□□□□ -0.81
CHD2-211ENST00000627460 ADD1P35611 737 aaKnown RBP10□□□□□ -0.81
CHD2-211ENST00000627460 NTRK3Q16288 839 aa10□□□□□ -0.81
CHD2-211ENST00000627460 CDC37L1Q7L3B6 337 aa10□□□□□ -0.81
CHD2-211ENST00000627460 FAM83AQ86UY5 434 aa10□□□□□ -0.81
CHD2-211ENST00000627460 ZSCAN29Q8IWY8 852 aaPredicted RBP10□□□□□ -0.81
CHD2-211ENST00000627460 STK11IPQ8N1F8 1099 aa10□□□□□ -0.81
CHD2-211ENST00000627460 SLC26A6Q9BXS9 759 aa10□□□□□ -0.81
CHD2-211ENST00000627460 INCENPQ9NQS7 918 aa10□□□□□ -0.81
CHD2-211ENST00000627460 STX8Q9UNK0 236 aa10□□□□□ -0.81
CHD2-211ENST00000627460 ZNF646O15015 1829 aaPredicted RBP10□□□□□ -0.81
CHD2-211ENST00000627460 SCN9AQ15858 1988 aa9.99□□□□□ -0.81
CHD2-211ENST00000627460 hCG_1984214I3L0E3 225 aa9.99□□□□□ -0.81
CHD2-211ENST00000627460 EVI5O60447 810 aa9.99□□□□□ -0.81
CHD2-211ENST00000627460 PRPF40AO75400 957 aaKnown RBP9.99□□□□□ -0.81
CHD2-211ENST00000627460 RAD17O75943 681 aa9.99□□□□□ -0.81
CHD2-211ENST00000627460 LETM1O95202 739 aaPredicted RBP9.99□□□□□ -0.81
CHD2-211ENST00000627460 TTLL1O95922 423 aa9.99□□□□□ -0.81
CHD2-211ENST00000627460 FDPSP14324 419 aaKnown RBP9.99□□□□□ -0.81
CHD2-211ENST00000627460 CALML3P27482 149 aa9.99□□□□□ -0.81
CHD2-211ENST00000627460 CDC27P30260 824 aa9.99□□□□□ -0.81
CHD2-211ENST00000627460 NOVP48745 357 aa9.99□□□□□ -0.81
CHD2-211ENST00000627460 CXCL9Q07325 125 aa9.99□□□□□ -0.81
CHD2-211ENST00000627460 RESTQ13127 1097 aa9.99□□□□□ -0.81
CHD2-211ENST00000627460 FAM47AQ5JRC9 791 aa9.99□□□□□ -0.81
CHD2-211ENST00000627460 FOXD4L5Q5VV16 416 aaPredicted RBP9.99□□□□□ -0.81
CHD2-211ENST00000627460 GALNT17Q6IS24 598 aa9.99□□□□□ -0.81
CHD2-211ENST00000627460 TMTC3Q6ZXV5 915 aa9.99□□□□□ -0.81
CHD2-211ENST00000627460 METTL16Q86W50 562 aaKnown RBP9.99□□□□□ -0.81
CHD2-211ENST00000627460 ZNF713Q8N859 430 aaPredicted RBP9.99□□□□□ -0.81
CHD2-211ENST00000627460 CCDC12Q8WUD4 166 aaPredicted RBP9.99□□□□□ -0.81
CHD2-211ENST00000627460 FAM151AQ8WW52 585 aa9.99□□□□□ -0.81
CHD2-211ENST00000627460 FOXD4L4Q8WXT5 416 aaPredicted RBP9.99□□□□□ -0.81
CHD2-211ENST00000627460 DYNLL2Q96FJ2 89 aa9.99□□□□□ -0.81
CHD2-211ENST00000627460 CABP5Q9NP86 173 aa9.99□□□□□ -0.81
CHD2-211ENST00000627460 SH3GLB2Q9NR46 395 aa9.99□□□□□ -0.81
CHD2-211ENST00000627460 LMBRD1Q9NUN5 540 aa9.99□□□□□ -0.81
CHD2-211ENST00000627460 TACC3Q9Y6A5 838 aa9.99□□□□□ -0.81
CHD2-211ENST00000627460 PSDA5PKW4 1024 aaPredicted RBP9.98□□□□□ -0.81
CHD2-211ENST00000627460 NFKBIEO00221 500 aa9.98□□□□□ -0.81
CHD2-211ENST00000627460 TRIM66O15016 1216 aa9.98□□□□□ -0.81
CHD2-211ENST00000627460 GRM4Q14833 912 aa9.98□□□□□ -0.81
CHD2-211ENST00000627460 ASPRV1Q53RT3 343 aa9.98□□□□□ -0.81
CHD2-211ENST00000627460 GPATCH4Q5T3I0 446 aaKnown RBP9.98□□□□□ -0.81
CHD2-211ENST00000627460 RCSD1Q6JBY9 416 aa9.98□□□□□ -0.81
CHD2-211ENST00000627460 TMEM179Q6ZVK1 233 aa9.98□□□□□ -0.81
CHD2-211ENST00000627460 JMYQ8N9B5 988 aa9.98□□□□□ -0.81
CHD2-211ENST00000627460 CCDC148Q8NFR7 591 aa9.98□□□□□ -0.81
CHD2-211ENST00000627460 SPATA32Q96LK8 384 aa9.98□□□□□ -0.81
CHD2-211ENST00000627460 MXD3Q9BW11 206 aa9.98□□□□□ -0.81
CHD2-211ENST00000627460 FOXP1Q9H334 677 aaPredicted RBP9.98□□□□□ -0.81
CHD2-211ENST00000627460 KANSL2Q9H9L4 492 aa9.98□□□□□ -0.81
CHD2-211ENST00000627460 DDX4Q9NQI0 724 aaKnown RBP9.98□□□□□ -0.81
CHD2-211ENST00000627460 KCNQ5Q9NR82 932 aa9.98□□□□□ -0.81
CHD2-211ENST00000627460 FAM217BQ9NTX9 383 aaPredicted RBP9.98□□□□□ -0.81
CHD2-211ENST00000627460 GINM1Q9NU53 330 aa9.98□□□□□ -0.81
CHD2-211ENST00000627460 MYH8P13535 1937 aa9.97□□□□□ -0.81
CHD2-211ENST00000627460 FZD9O00144 591 aa9.97□□□□□ -0.81
CHD2-211ENST00000627460 YEATS4O95619 227 aa9.97□□□□□ -0.81
CHD2-211ENST00000627460 BMP15O95972 392 aa9.97□□□□□ -0.81
CHD2-211ENST00000627460 PARP1P09874 1014 aaKnown RBP9.97□□□□□ -0.81
CHD2-211ENST00000627460 RXRAP19793 462 aa9.97□□□□□ -0.81
CHD2-211ENST00000627460 LMNB1P20700 586 aa9.97□□□□□ -0.81
CHD2-211ENST00000627460 ZNF280AP59817 542 aaPredicted RBP9.97□□□□□ -0.81
CHD2-211ENST00000627460 DNM1Q05193 864 aaKnown RBP9.97□□□□□ -0.81
CHD2-211ENST00000627460 TRAF1Q13077 416 aa9.97□□□□□ -0.81
CHD2-211ENST00000627460 CERKLQ49MI3 558 aaPredicted RBP9.97□□□□□ -0.81
CHD2-211ENST00000627460 CCDC144CPQ8IYA2 1237 aa9.97□□□□□ -0.81
CHD2-211ENST00000627460 KCNG4Q8TDN1 519 aa9.97□□□□□ -0.81
CHD2-211ENST00000627460 DDX12PQ92771 950 aa9.97□□□□□ -0.81
CHD2-211ENST00000627460 TMEM47Q9BQJ4 181 aa9.97□□□□□ -0.81
CHD2-211ENST00000627460 MYL10Q9BUA6 226 aa9.97□□□□□ -0.81
CHD2-211ENST00000627460 SPZ1Q9BXG8 430 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms