RNA–Protein interactions for RNA: ENST00000626021.2

PTP4A1-205, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 2,203 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-205ENST00000626021 CDKL5O76039 1030 aa4.73□□□□□ -1.65
PTP4A1-205ENST00000626021 SYF2O95926 243 aaKnown RBP4.73□□□□□ -1.65
PTP4A1-205ENST00000626021 FOSBP53539 338 aa4.73□□□□□ -1.65
PTP4A1-205ENST00000626021 ADKP55263 362 aaKnown RBP4.73□□□□□ -1.65
PTP4A1-205ENST00000626021 VSNL1P62760 191 aa4.73□□□□□ -1.65
PTP4A1-205ENST00000626021 PDE4BQ07343 736 aa4.73□□□□□ -1.65
PTP4A1-205ENST00000626021 TFCP2Q12800 502 aa4.73□□□□□ -1.65
PTP4A1-205ENST00000626021 PNOCQ13519 176 aa4.73□□□□□ -1.65
PTP4A1-205ENST00000626021 DSG2Q14126 1118 aa4.73□□□□□ -1.65
PTP4A1-205ENST00000626021 KIF4BQ2VIQ3 1234 aa4.73□□□□□ -1.65
PTP4A1-205ENST00000626021 NBPF14Q5TI25 921 aa4.73□□□□□ -1.65
PTP4A1-205ENST00000626021 NBPF10Q6P3W6 841 aaKnown RBP4.73□□□□□ -1.65
PTP4A1-205ENST00000626021 NBPF15Q8N660 670 aa4.73□□□□□ -1.65
PTP4A1-205ENST00000626021 PDILTQ8N807 584 aa4.73□□□□□ -1.65
PTP4A1-205ENST00000626021 PTCD2Q8WV60 388 aaKnown RBP4.73□□□□□ -1.65
PTP4A1-205ENST00000626021 RUBCNQ92622 972 aa4.73□□□□□ -1.65
PTP4A1-205ENST00000626021 DBNDD2Q9BQY9 259 aa4.73□□□□□ -1.65
PTP4A1-205ENST00000626021 A1CFQ9NQ94 594 aaKnown RBP4.73□□□□□ -1.65
PTP4A1-205ENST00000626021 PAG1Q9NWQ8 432 aa4.73□□□□□ -1.65
PTP4A1-205ENST00000626021 HPS5Q9UPZ3 1129 aa4.73□□□□□ -1.65
PTP4A1-205ENST00000626021 TIAM2Q8IVF5 1701 aa4.73□□□□□ -1.65
PTP4A1-205ENST00000626021 LRRIQ3A6PVS8 624 aaPredicted RBP4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 N4BP1O75113 896 aaKnown RBP4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 ZFYP08048 801 aaPredicted RBP4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 BMP6P22004 513 aa4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 USP14P54578 494 aa4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 AMPD2Q01433 879 aa4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 GOLGA8FQ08AF8 430 aa4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 GOLGA8DPQ0D2H9 430 aa4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 CAMK2BQ13554 666 aa4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 KARSQ15046 597 aaKnown RBP4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 IMMTQ16891 758 aaKnown RBP4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 LONRF3Q496Y0 759 aa4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 FILIP1LQ4L180 1135 aa4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 EPHA10Q5JZY3 1008 aa4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 ZNF569Q5MCW4 686 aa4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 FOXR1Q6PIV2 292 aa4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 RAD9BQ6WBX8 426 aa4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 APTXQ7Z2E3 356 aaKnown RBP4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 RIC3Q7Z5B4 369 aa4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 PPFIBP1Q86W92 1011 aa4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 SPATS2Q86XZ4 545 aaKnown RBP4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 CNGA4Q8IV77 575 aa4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 SLC35F6Q8N357 371 aa4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 NCOA7Q8NI08 942 aa4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 CCDC102AQ96A19 550 aa4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 FAM204AQ9H8W3 233 aa4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 KCNH3Q9ULD8 1083 aa4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 WWC3Q9ULE0 1092 aa4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 NFE2L3Q9Y4A8 694 aa4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 ARIH1Q9Y4X5 557 aaPredicted RBP4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 STK36Q9NRP7 1315 aa4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 ZC3H4Q9UPT8 1303 aaKnown RBP4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 CDK5RAP2Q96SN8 1893 aa4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 ABCC12Q96J65 1359 aa4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 RGPD3A6NKT7 1758 aaPredicted RBP4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 RGPD4Q7Z3J3 1758 aa4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 RIC1Q4ADV7 1423 aa4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 KLF18A0A0U1RQI7 1052 aa4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 CCDC196A0A1B0GTZ2 297 aa4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 LRRC10BA6NIK2 292 aa4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 CPLX1O14810 134 aa4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 MFAP3LO75121 409 aa4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 RNF40O75150 1001 aa4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 CLSTN1O94985 981 aa4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 PTPREP23469 700 aa4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 MARCKSP29966 332 aaPredicted RBP4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 PLCD1P51178 756 aa4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 DDR1Q08345 913 aa4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 PPFIA1Q13136 1202 aa4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 TRIM14Q14142 442 aa4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 POSTNQ15063 836 aa4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 E2F4Q16254 413 aa4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 SPATA1Q5VX52 437 aa4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 KRT40Q6A162 431 aa4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 OTUD7BQ6GQQ9 843 aa4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 ISM2Q6H9L7 571 aa4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 CPLX2Q6PUV4 134 aaKnown RBP4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 GBP6Q6ZN66 633 aa4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 COPS6Q7L5N1 327 aa4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 TRAPPC11Q7Z392 1133 aa4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 UBE3BQ7Z3V4 1068 aa4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 KRI1Q8N9T8 703 aaKnown RBP4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 CCDC148Q8NFR7 591 aa4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 STAG1Q8WVM7 1258 aa4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 CDCA7Q9BWT1 371 aaPredicted RBP4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 ADD3Q9UEY8 706 aaKnown RBP4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 PUF60Q9UHX1 559 aaKnown RBP4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 MYO6Q9UM54 1294 aa4.72□□□□□ -1.65
PTP4A1-205ENST00000626021 TAF1P21675 1872 aa4.71□□□□□ -1.65
PTP4A1-205ENST00000626021 MAST3O60307 1309 aa4.71□□□□□ -1.65
PTP4A1-205ENST00000626021 ZMYM6O95789 1325 aa4.71□□□□□ -1.65
PTP4A1-205ENST00000626021 CDHR2Q9BYE9 1310 aa4.71□□□□□ -1.65
PTP4A1-205ENST00000626021 NID2Q14112 1375 aa4.71□□□□□ -1.65
PTP4A1-205ENST00000626021 SOWAHDA6NJG2 315 aa4.71□□□□□ -1.66
PTP4A1-205ENST00000626021 EBAG9O00559 213 aa4.71□□□□□ -1.66
PTP4A1-205ENST00000626021 CLGNO14967 610 aa4.71□□□□□ -1.66
PTP4A1-205ENST00000626021 PRC1O43663 620 aa4.71□□□□□ -1.66
PTP4A1-205ENST00000626021 KIF1CO43896 1103 aaKnown RBP4.71□□□□□ -1.66
PTP4A1-205ENST00000626021 CDC27P30260 824 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 222.6 ms