RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 DCAF17Q5H9S7 520 aaPredicted RBP12.32□□□□□ -0.44
VPS8-227ENST00000625842 RBM46Q8TBY0 533 aaKnown RBP12.32□□□□□ -0.44
VPS8-227ENST00000625842 CPSF3Q9UKF6 684 aaKnown RBP12.32□□□□□ -0.44
VPS8-227ENST00000625842 WDR64B1ANS9 1081 aa12.32□□□□□ -0.44
VPS8-227ENST00000625842 CASQ1P31415 396 aa12.32□□□□□ -0.44
VPS8-227ENST00000625842 RECQLP46063 649 aaPredicted RBP12.32□□□□□ -0.44
VPS8-227ENST00000625842 TIMM10P62072 90 aa12.32□□□□□ -0.44
VPS8-227ENST00000625842 DMP1Q13316 513 aaPredicted RBP12.32□□□□□ -0.44
VPS8-227ENST00000625842 ZKSCAN3Q9BRR0 538 aa12.32□□□□□ -0.44
VPS8-227ENST00000625842 MYL3P08590 195 aa12.31□□□□□ -0.44
VPS8-227ENST00000625842 SURF1Q15526 300 aa12.31□□□□□ -0.44
VPS8-227ENST00000625842 SEL1L2Q5TEA6 688 aa12.31□□□□□ -0.44
VPS8-227ENST00000625842 RNF219Q5W0B1 726 aaPredicted RBP12.31□□□□□ -0.44
VPS8-227ENST00000625842 C8orf58Q8NAV2 365 aa12.31□□□□□ -0.44
VPS8-227ENST00000625842 WDR11Q9BZH6 1224 aa12.31□□□□□ -0.44
VPS8-227ENST00000625842 SERPINB13Q9UIV8 391 aa12.31□□□□□ -0.44
VPS8-227ENST00000625842 DNA2P51530 1060 aa12.31□□□□□ -0.44
VPS8-227ENST00000625842 IGBP1P78318 339 aa12.31□□□□□ -0.44
VPS8-227ENST00000625842 EFCAB13Q8IY85 973 aa12.31□□□□□ -0.44
VPS8-227ENST00000625842 CCDC63Q8NA47 563 aa12.31□□□□□ -0.44
VPS8-227ENST00000625842 HAUS1Q96CS2 278 aa12.31□□□□□ -0.44
VPS8-227ENST00000625842 TTC14Q96N46 770 aa12.31□□□□□ -0.44
VPS8-227ENST00000625842 FARP1Q9Y4F1 1045 aaPredicted RBP12.31□□□□□ -0.44
VPS8-227ENST00000625842 ASB14A6NK59 587 aa12.31□□□□□ -0.44
VPS8-227ENST00000625842 SPTLC2O15270 562 aa12.31□□□□□ -0.44
VPS8-227ENST00000625842 HEXIM1O94992 359 aaKnown RBP12.31□□□□□ -0.44
VPS8-227ENST00000625842 PLA2G4DQ86XP0 818 aa12.31□□□□□ -0.44
VPS8-227ENST00000625842 GPR161Q8N6U8 529 aaKnown RBP12.31□□□□□ -0.44
VPS8-227ENST00000625842 DHX58Q96C10 678 aa12.31□□□□□ -0.44
VPS8-227ENST00000625842 FAM81BQ96LP2 452 aa12.31□□□□□ -0.44
VPS8-227ENST00000625842 BRIP1Q9BX63 1249 aa12.31□□□□□ -0.44
VPS8-227ENST00000625842 MKRN1Q9UHC7 482 aaKnown RBP12.31□□□□□ -0.44
VPS8-227ENST00000625842 IPO11Q9UI26 975 aaKnown RBP12.31□□□□□ -0.44
VPS8-227ENST00000625842 NBPF26B4DH59 902 aa12.31□□□□□ -0.44
VPS8-227ENST00000625842 SFSWAPQ12872 951 aaKnown RBP12.31□□□□□ -0.44
VPS8-227ENST00000625842 KBTBD3Q8NAB2 608 aa12.31□□□□□ -0.44
VPS8-227ENST00000625842 USP17L5A8MUK1 530 aa12.3□□□□□ -0.44
VPS8-227ENST00000625842 TXKP42681 527 aa12.3□□□□□ -0.44
VPS8-227ENST00000625842 THEM5Q8N1Q8 247 aa12.3□□□□□ -0.44
VPS8-227ENST00000625842 PFDN4Q9NQP4 134 aa12.3□□□□□ -0.44
VPS8-227ENST00000625842 SARNPP82979 210 aaKnown RBP12.3□□□□□ -0.44
VPS8-227ENST00000625842 PPP1R2P3Q6NXS1 205 aa12.3□□□□□ -0.44
VPS8-227ENST00000625842 CCDC42Q96M95 316 aa12.3□□□□□ -0.44
VPS8-227ENST00000625842 AFG3L2Q9Y4W6 797 aa12.3□□□□□ -0.44
VPS8-227ENST00000625842 CARMIL3Q8ND23 1372 aa12.3□□□□□ -0.44
VPS8-227ENST00000625842 GEN1Q17RS7 908 aa12.3□□□□□ -0.44
VPS8-227ENST00000625842 TMCO3Q6UWJ1 677 aa12.3□□□□□ -0.44
VPS8-227ENST00000625842 ARMCX2Q7L311 632 aa12.3□□□□□ -0.44
VPS8-227ENST00000625842 SPATA24Q86W54 205 aa12.3□□□□□ -0.44
VPS8-227ENST00000625842 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.3□□□□□ -0.44
VPS8-227ENST00000625842 ANAPC4Q9UJX5 808 aa12.3□□□□□ -0.44
VPS8-227ENST00000625842 TTLL1O95922 423 aa12.3□□□□□ -0.44
VPS8-227ENST00000625842 BMP3P12645 472 aa12.3□□□□□ -0.44
VPS8-227ENST00000625842 HUNKP57058 714 aa12.3□□□□□ -0.44
VPS8-227ENST00000625842 TNNC1P63316 161 aa12.3□□□□□ -0.44
VPS8-227ENST00000625842 HDAC1Q13547 482 aaPredicted RBP12.3□□□□□ -0.44
VPS8-227ENST00000625842 HERC4Q5GLZ8 1057 aaPredicted RBP12.3□□□□□ -0.44
VPS8-227ENST00000625842 USP17L2Q6R6M4 530 aa12.3□□□□□ -0.44
VPS8-227ENST00000625842 LEO1Q8WVC0 666 aaPredicted RBP12.3□□□□□ -0.44
VPS8-227ENST00000625842 MMS19Q96T76 1030 aa12.3□□□□□ -0.44
VPS8-227ENST00000625842 MTRF1LQ9UGC7 380 aaKnown RBP12.3□□□□□ -0.44
VPS8-227ENST00000625842 V9GY48 417 aaPredicted RBP12.3□□□□□ -0.44
VPS8-227ENST00000625842 CALRP27797 417 aaKnown RBP12.29□□□□□ -0.44
VPS8-227ENST00000625842 SNAPC2Q13487 334 aa12.29□□□□□ -0.44
VPS8-227ENST00000625842 FAM102BQ5T8I3 360 aa12.29□□□□□ -0.44
VPS8-227ENST00000625842 TRIM50Q86XT4 487 aa12.29□□□□□ -0.44
VPS8-227ENST00000625842 C7orf31Q8N865 590 aa12.29□□□□□ -0.44
VPS8-227ENST00000625842 TCP11Q8WWU5 503 aa12.29□□□□□ -0.44
VPS8-227ENST00000625842 CCDC68Q9H2F9 335 aa12.29□□□□□ -0.44
VPS8-227ENST00000625842 SNX25Q9H3E2 840 aa12.29□□□□□ -0.44
VPS8-227ENST00000625842 AAASQ9NRG9 546 aa12.29□□□□□ -0.44
VPS8-227ENST00000625842 RIPOR2Q9Y4F9 1068 aa12.29□□□□□ -0.44
VPS8-227ENST00000625842 SLC12A2P55011 1212 aa12.29□□□□□ -0.44
VPS8-227ENST00000625842 CDC42EP1Q00587 391 aa12.29□□□□□ -0.44
VPS8-227ENST00000625842 CALCOCO2Q13137 446 aa12.29□□□□□ -0.44
VPS8-227ENST00000625842 CAMK4Q16566 473 aa12.29□□□□□ -0.44
VPS8-227ENST00000625842 CC2D1AQ6P1N0 951 aaPredicted RBP12.29□□□□□ -0.44
VPS8-227ENST00000625842 TPH2Q8IWU9 490 aa12.29□□□□□ -0.44
VPS8-227ENST00000625842 MAIP1Q8WWC4 291 aa12.29□□□□□ -0.44
VPS8-227ENST00000625842 PPP1R9BQ96SB3 815 aa12.29□□□□□ -0.44
VPS8-227ENST00000625842 SOS2Q07890 1332 aaPredicted RBP12.29□□□□□ -0.44
VPS8-227ENST00000625842 IGSF3O75054 1194 aa12.29□□□□□ -0.44
VPS8-227ENST00000625842 PPFIA3O75145 1194 aa12.29□□□□□ -0.44
VPS8-227ENST00000625842 ZWINTO95229 277 aa12.29□□□□□ -0.44
VPS8-227ENST00000625842 VEGFAP15692 232 aaPredicted RBP12.29□□□□□ -0.44
VPS8-227ENST00000625842 FBLN1P23142 703 aa12.29□□□□□ -0.44
VPS8-227ENST00000625842 KRT9P35527 623 aa12.29□□□□□ -0.44
VPS8-227ENST00000625842 FAM193AP78312 1265 aa12.29□□□□□ -0.44
VPS8-227ENST00000625842 TBC1D8BQ0IIM8 1120 aa12.29□□□□□ -0.44
VPS8-227ENST00000625842 IRAK4Q9NWZ3 460 aa12.29□□□□□ -0.44
VPS8-227ENST00000625842 DENND3A2RUS2 1198 aa12.29□□□□□ -0.44
VPS8-227ENST00000625842 B4E1Z4 1266 aa12.29□□□□□ -0.44
VPS8-227ENST00000625842 USP17L12C9JPN9 530 aa12.29□□□□□ -0.44
VPS8-227ENST00000625842 USP17L21D6R901 530 aa12.29□□□□□ -0.44
VPS8-227ENST00000625842 GNA14O95837 355 aa12.29□□□□□ -0.44
VPS8-227ENST00000625842 KIF5AQ12840 1032 aa12.29□□□□□ -0.44
VPS8-227ENST00000625842 TBC1D10BQ4KMP7 808 aaPredicted RBP12.29□□□□□ -0.44
VPS8-227ENST00000625842 KCNV1Q6PIU1 500 aa12.29□□□□□ -0.44
VPS8-227ENST00000625842 DPF3Q92784 378 aa12.29□□□□□ -0.44
VPS8-227ENST00000625842 ZNF532Q9HCE3 1301 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms