RNA–Protein interactions for RNA: ENST00000624822.1

LINC01560-202, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

Gene LINC01560, Length 1,238 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-202ENST00000624822 TESPA1A2RU30 521 aaPredicted RBP11.35□□□□□ -0.59
LINC01560-202ENST00000624822 C2orf72A6NCS6 295 aa11.35□□□□□ -0.59
LINC01560-202ENST00000624822 USP17L10C9JJH3 530 aa11.35□□□□□ -0.59
LINC01560-202ENST00000624822 TBC1D8O95759 1140 aa11.35□□□□□ -0.59
LINC01560-202ENST00000624822 LBX1P52954 281 aa11.35□□□□□ -0.59
LINC01560-202ENST00000624822 HMGCS2P54868 508 aa11.35□□□□□ -0.59
LINC01560-202ENST00000624822 HAND2P61296 217 aa11.35□□□□□ -0.59
LINC01560-202ENST00000624822 ATP2B2Q01814 1243 aa11.35□□□□□ -0.59
LINC01560-202ENST00000624822 MTMR2Q13614 643 aa11.35□□□□□ -0.59
LINC01560-202ENST00000624822 TAF1CQ15572 869 aaPredicted RBP11.35□□□□□ -0.59
LINC01560-202ENST00000624822 ALX1Q15699 326 aa11.35□□□□□ -0.59
LINC01560-202ENST00000624822 TMEM179Q6ZVK1 233 aa11.35□□□□□ -0.59
LINC01560-202ENST00000624822 FASTKD5Q7L8L6 764 aaKnown RBP11.35□□□□□ -0.59
LINC01560-202ENST00000624822 PRRT2Q7Z6L0 340 aaPredicted RBP11.35□□□□□ -0.59
LINC01560-202ENST00000624822 FAM43AQ8N2R8 423 aa11.35□□□□□ -0.59
LINC01560-202ENST00000624822 CCDC17Q96LX7 622 aa11.35□□□□□ -0.59
LINC01560-202ENST00000624822 PTPN18Q99952 460 aa11.35□□□□□ -0.59
LINC01560-202ENST00000624822 DSCC1Q9BVC3 393 aa11.35□□□□□ -0.59
LINC01560-202ENST00000624822 IL25Q9H293 177 aa11.35□□□□□ -0.59
LINC01560-202ENST00000624822 TMOD4Q9NZQ9 345 aa11.35□□□□□ -0.59
LINC01560-202ENST00000624822 ZMYM6O95789 1325 aa11.35□□□□□ -0.59
LINC01560-202ENST00000624822 BTBD19C9JJ37 291 aa11.34□□□□□ -0.59
LINC01560-202ENST00000624822 ZNF213O14771 459 aa11.34□□□□□ -0.59
LINC01560-202ENST00000624822 TSPY3P0CV98 308 aa11.34□□□□□ -0.59
LINC01560-202ENST00000624822 TSPY8P0CW00 308 aa11.34□□□□□ -0.59
LINC01560-202ENST00000624822 HSPA8P11142 646 aaKnown RBP11.34□□□□□ -0.59
LINC01560-202ENST00000624822 ICA1Q05084 483 aa11.34□□□□□ -0.59
LINC01560-202ENST00000624822 DGKZQ13574 1117 aa11.34□□□□□ -0.59
LINC01560-202ENST00000624822 RRP12Q5JTH9 1297 aaKnown RBP11.34□□□□□ -0.59
LINC01560-202ENST00000624822 KIAA1211Q6ZU35 1233 aa11.34□□□□□ -0.59
LINC01560-202ENST00000624822 CLEC10AQ8IUN9 316 aa11.34□□□□□ -0.59
LINC01560-202ENST00000624822 ZNF687Q8N1G0 1237 aa11.34□□□□□ -0.59
LINC01560-202ENST00000624822 WDR18Q9BV38 432 aa11.34□□□□□ -0.59
LINC01560-202ENST00000624822 ARHGEF10LQ9HCE6 1279 aa11.34□□□□□ -0.59
LINC01560-202ENST00000624822 MGAMO43451 1857 aa11.34□□□□□ -0.59
LINC01560-202ENST00000624822 TSPY2A6NKD2 308 aa11.33□□□□□ -0.6
LINC01560-202ENST00000624822 C19orf81C9J6K1 198 aa11.33□□□□□ -0.6
LINC01560-202ENST00000624822 PDHXO00330 501 aa11.33□□□□□ -0.6
LINC01560-202ENST00000624822 SGSM2O43147 1006 aa11.33□□□□□ -0.6
LINC01560-202ENST00000624822 RAD21O60216 631 aa11.33□□□□□ -0.6
LINC01560-202ENST00000624822 CDC45O75419 566 aa11.33□□□□□ -0.6
LINC01560-202ENST00000624822 RASA1P20936 1047 aa11.33□□□□□ -0.6
LINC01560-202ENST00000624822 BACE1P56817 501 aa11.33□□□□□ -0.6
LINC01560-202ENST00000624822 CRHR2Q13324 411 aa11.33□□□□□ -0.6
LINC01560-202ENST00000624822 IMMTQ16891 758 aaKnown RBP11.33□□□□□ -0.6
LINC01560-202ENST00000624822 ANKRD23Q86SG2 305 aa11.33□□□□□ -0.6
LINC01560-202ENST00000624822 PROCA1Q8NCQ7 364 aaPredicted RBP11.33□□□□□ -0.6
LINC01560-202ENST00000624822 ZFYVE28Q9HCC9 887 aa11.33□□□□□ -0.6
LINC01560-202ENST00000624822 CTNNA3Q9UI47 895 aa11.33□□□□□ -0.6
LINC01560-202ENST00000624822 PARP14Q460N5 1801 aa11.32□□□□□ -0.6
LINC01560-202ENST00000624822 RANBP6O60518 1105 aaKnown RBP11.32□□□□□ -0.6
LINC01560-202ENST00000624822 GUCY1A2P33402 732 aa11.32□□□□□ -0.6
LINC01560-202ENST00000624822 USP14P54578 494 aa11.32□□□□□ -0.6
LINC01560-202ENST00000624822 PABPC4Q13310 644 aaKnown RBP eCLIP11.32□□□□□ -0.6
LINC01560-202ENST00000624822 SH3D19Q5HYK7 790 aa11.32□□□□□ -0.6
LINC01560-202ENST00000624822 FAM47AQ5JRC9 791 aa11.32□□□□□ -0.6
LINC01560-202ENST00000624822 TREML2Q5T2D2 321 aa11.32□□□□□ -0.6
LINC01560-202ENST00000624822 USP17L2Q6R6M4 530 aa11.32□□□□□ -0.6
LINC01560-202ENST00000624822 MFSD6Q6ZSS7 791 aa11.32□□□□□ -0.6
LINC01560-202ENST00000624822 ACER1Q8TDN7 264 aa11.32□□□□□ -0.6
LINC01560-202ENST00000624822 ESYT1Q9BSJ8 1104 aa11.32□□□□□ -0.6
LINC01560-202ENST00000624822 SH2D4AQ9H788 454 aa11.32□□□□□ -0.6
LINC01560-202ENST00000624822 INCENPQ9NQS7 918 aa11.32□□□□□ -0.6
LINC01560-202ENST00000624822 ANAPC4Q9UJX5 808 aa11.32□□□□□ -0.6
LINC01560-202ENST00000624822 AGTPBP1Q9UPW5 1226 aa11.32□□□□□ -0.6
LINC01560-202ENST00000624822 ZSWIM8A7E2V4 1837 aa11.32□□□□□ -0.6
LINC01560-202ENST00000624822 COL11A1P12107 1806 aaPredicted RBP11.31□□□□□ -0.6
LINC01560-202ENST00000624822 EEF2P13639 858 aaKnown RBP11.31□□□□□ -0.6
LINC01560-202ENST00000624822 TFAP4Q01664 338 aa11.31□□□□□ -0.6
LINC01560-202ENST00000624822 PTH1RQ03431 593 aa11.31□□□□□ -0.6
LINC01560-202ENST00000624822 MOGSQ13724 837 aa11.31□□□□□ -0.6
LINC01560-202ENST00000624822 AKNAD1Q5T1N1 836 aa11.31□□□□□ -0.6
LINC01560-202ENST00000624822 GPAT2Q6NUI2 795 aa11.31□□□□□ -0.6
LINC01560-202ENST00000624822 SMCR8Q8TEV9 937 aaPredicted RBP11.31□□□□□ -0.6
LINC01560-202ENST00000624822 PARK7Q99497 189 aaKnown RBP11.31□□□□□ -0.6
LINC01560-202ENST00000624822 RNF41Q9H4P4 317 aaPredicted RBP11.31□□□□□ -0.6
LINC01560-202ENST00000624822 KANSL2Q9H9L4 492 aa11.31□□□□□ -0.6
LINC01560-202ENST00000624822 ZCCHC17Q9NP64 241 aaKnown RBP11.31□□□□□ -0.6
LINC01560-202ENST00000624822 ANO2Q9NQ90 1003 aa11.31□□□□□ -0.6
LINC01560-202ENST00000624822 RTN4Q9NQC3 1192 aaKnown RBP11.31□□□□□ -0.6
LINC01560-202ENST00000624822 PNMA3Q9UL41 463 aa11.31□□□□□ -0.6
LINC01560-202ENST00000624822 GPR25O00155 361 aa11.3□□□□□ -0.6
LINC01560-202ENST00000624822 CYP2C8P10632 490 aa11.3□□□□□ -0.6
LINC01560-202ENST00000624822 OSBPP22059 807 aa11.3□□□□□ -0.6
LINC01560-202ENST00000624822 IRX3P78415 501 aaPredicted RBP11.3□□□□□ -0.6
LINC01560-202ENST00000624822 TBC1D10CQ8IV04 446 aa11.3□□□□□ -0.6
LINC01560-202ENST00000624822 STAG1Q8WVM7 1258 aa11.3□□□□□ -0.6
LINC01560-202ENST00000624822 CEP95Q96GE4 821 aa11.3□□□□□ -0.6
LINC01560-202ENST00000624822 KIAA1683Q9H0B3 1180 aa11.3□□□□□ -0.6
LINC01560-202ENST00000624822 R3HDMLQ9H3Y0 253 aa11.3□□□□□ -0.6
LINC01560-202ENST00000624822 GOPCQ9HD26 462 aa11.3□□□□□ -0.6
LINC01560-202ENST00000624822 EMILIN3Q9NT22 766 aa11.3□□□□□ -0.6
LINC01560-202ENST00000624822 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.3□□□□□ -0.6
LINC01560-202ENST00000624822 NEDD4P46934 1319 aa11.3□□□□□ -0.6
LINC01560-202ENST00000624822 A0A1W2PRG0 241 aa11.29□□□□□ -0.6
LINC01560-202ENST00000624822 ORC4O43929 436 aa11.29□□□□□ -0.6
LINC01560-202ENST00000624822 TLR2O60603 784 aa11.29□□□□□ -0.6
LINC01560-202ENST00000624822 FKTNO75072 461 aa11.29□□□□□ -0.6
LINC01560-202ENST00000624822 PPP1R37O75864 691 aa11.29□□□□□ -0.6
LINC01560-202ENST00000624822 PCP11498 1178 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms