RNA–Protein interactions for RNA: ENST00000620843.1

LPCAT3-213, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 5

Gene LPCAT3, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-213ENST00000620843 SMARCC1Q92922 1105 aaPredicted RBP9.44□□□□□ -0.9
LPCAT3-213ENST00000620843 STOML1Q9UBI4 398 aa9.44□□□□□ -0.9
LPCAT3-213ENST00000620843 TPX2Q9ULW0 747 aaKnown RBP9.44□□□□□ -0.9
LPCAT3-213ENST00000620843 RAXQ9Y2V3 346 aa9.44□□□□□ -0.9
LPCAT3-213ENST00000620843 COL17A1Q9UMD9 1497 aaPredicted RBP9.44□□□□□ -0.9
LPCAT3-213ENST00000620843 GSK3AP49840 483 aa9.43□□□□□ -0.9
LPCAT3-213ENST00000620843 RNF4P78317 190 aa9.43□□□□□ -0.9
LPCAT3-213ENST00000620843 KCNMA1Q12791 1236 aa9.43□□□□□ -0.9
LPCAT3-213ENST00000620843 DCAF15Q66K64 600 aa9.43□□□□□ -0.9
LPCAT3-213ENST00000620843 NLGN1Q8N2Q7 840 aa9.43□□□□□ -0.9
LPCAT3-213ENST00000620843 ST13P5Q8NFI4 369 aaPredicted RBP9.43□□□□□ -0.9
LPCAT3-213ENST00000620843 TBC1D32Q96NH3 1257 aa9.43□□□□□ -0.9
LPCAT3-213ENST00000620843 HAUS7Q99871 368 aa9.43□□□□□ -0.9
LPCAT3-213ENST00000620843 PFDN2Q9UHV9 154 aa9.43□□□□□ -0.9
LPCAT3-213ENST00000620843 RBAK-RBAKDNI3L0D1 243 aa9.42□□□□□ -0.9
LPCAT3-213ENST00000620843 ADMP35318 185 aa9.42□□□□□ -0.9
LPCAT3-213ENST00000620843 SDE2Q6IQ49 451 aa9.42□□□□□ -0.9
LPCAT3-213ENST00000620843 SPATC1Q76KD6 591 aa9.42□□□□□ -0.9
LPCAT3-213ENST00000620843 LILRB2Q8N423 598 aa9.42□□□□□ -0.9
LPCAT3-213ENST00000620843 RNF141Q8WVD5 230 aa9.42□□□□□ -0.9
LPCAT3-213ENST00000620843 GATA6Q92908 595 aa9.42□□□□□ -0.9
LPCAT3-213ENST00000620843 VWCEQ96DN2 955 aa9.42□□□□□ -0.9
LPCAT3-213ENST00000620843 CNTNAP4Q9C0A0 1308 aa9.41□□□□□ -0.9
LPCAT3-213ENST00000620843 EPHX1P07099 455 aa9.41□□□□□ -0.9
LPCAT3-213ENST00000620843 SLC10A6Q3KNW5 377 aa9.41□□□□□ -0.9
LPCAT3-213ENST00000620843 HEATR6Q6AI08 1181 aaKnown RBP9.41□□□□□ -0.9
LPCAT3-213ENST00000620843 PRR23CQ6ZRP0 262 aa9.41□□□□□ -0.9
LPCAT3-213ENST00000620843 ZAR1Q86SH2 424 aa9.41□□□□□ -0.9
LPCAT3-213ENST00000620843 RNPC3Q96LT9 517 aaKnown RBP9.41□□□□□ -0.9
LPCAT3-213ENST00000620843 ASPNQ9BXN1 380 aa9.41□□□□□ -0.9
LPCAT3-213ENST00000620843 ZMYM5Q9UJ78 669 aa9.41□□□□□ -0.9
LPCAT3-213ENST00000620843 CADPSQ9ULU8 1353 aa9.4□□□□□ -0.9
LPCAT3-213ENST00000620843 CBFA2T2O43439 604 aa9.4□□□□□ -0.9
LPCAT3-213ENST00000620843 DIAPH1O60610 1272 aaKnown RBP9.4□□□□□ -0.9
LPCAT3-213ENST00000620843 ITGB2P05107 769 aa9.4□□□□□ -0.9
LPCAT3-213ENST00000620843 CYP7A1P22680 504 aa9.4□□□□□ -0.9
LPCAT3-213ENST00000620843 SSRP1Q08945 709 aaKnown RBP9.4□□□□□ -0.9
LPCAT3-213ENST00000620843 PLA2G4EQ3MJ16 856 aa9.4□□□□□ -0.9
LPCAT3-213ENST00000620843 SHISA5Q8N114 240 aa9.4□□□□□ -0.9
LPCAT3-213ENST00000620843 PRDM5Q9NQX1 630 aaPredicted RBP9.4□□□□□ -0.9
LPCAT3-213ENST00000620843 TPSG1Q9NRR2 321 aa9.4□□□□□ -0.9
LPCAT3-213ENST00000620843 SUSD2Q9UGT4 822 aa9.4□□□□□ -0.9
LPCAT3-213ENST00000620843 ZCCHC6Q5VYS8 1495 aaKnown RBP9.4□□□□□ -0.91
LPCAT3-213ENST00000620843 ANKRD34BA5PLL1 514 aa9.39□□□□□ -0.91
LPCAT3-213ENST00000620843 NAT2P11245 290 aa9.39□□□□□ -0.91
LPCAT3-213ENST00000620843 OGFOD3Q6PK18 319 aa9.39□□□□□ -0.91
LPCAT3-213ENST00000620843 FBXL6Q8N531 539 aa9.39□□□□□ -0.91
LPCAT3-213ENST00000620843 SH3TC2Q8TF17 1288 aa9.39□□□□□ -0.91
LPCAT3-213ENST00000620843 MFSD14AQ96MC6 490 aa9.39□□□□□ -0.91
LPCAT3-213ENST00000620843 FBXL18Q96ME1 805 aa9.39□□□□□ -0.91
LPCAT3-213ENST00000620843 KLHL25Q9H0H3 589 aa9.39□□□□□ -0.91
LPCAT3-213ENST00000620843 EPN3Q9H201 632 aa9.39□□□□□ -0.91
LPCAT3-213ENST00000620843 DCAF1Q9Y4B6 1507 aa9.39□□□□□ -0.91
LPCAT3-213ENST00000620843 KDM2BQ8NHM5 1336 aa9.38□□□□□ -0.91
LPCAT3-213ENST00000620843 FAM170BA6NMN3 283 aa9.38□□□□□ -0.91
LPCAT3-213ENST00000620843 SHOXO15266 292 aa9.38□□□□□ -0.91
LPCAT3-213ENST00000620843 LRRN2O75325 713 aa9.38□□□□□ -0.91
LPCAT3-213ENST00000620843 GDF11O95390 407 aa9.38□□□□□ -0.91
LPCAT3-213ENST00000620843 ZNF143P52747 638 aaPredicted RBP9.38□□□□□ -0.91
LPCAT3-213ENST00000620843 AUHQ13825 339 aaKnown RBP9.38□□□□□ -0.91
LPCAT3-213ENST00000620843 SV2CQ496J9 727 aa9.38□□□□□ -0.91
LPCAT3-213ENST00000620843 SFRP5Q5T4F7 317 aa9.38□□□□□ -0.91
LPCAT3-213ENST00000620843 FAM214BQ7L5A3 538 aa9.38□□□□□ -0.91
LPCAT3-213ENST00000620843 C7orf61Q8IZ16 206 aa9.38□□□□□ -0.91
LPCAT3-213ENST00000620843 ZNF669Q96BR6 464 aaPredicted RBP9.38□□□□□ -0.91
LPCAT3-213ENST00000620843 FGD4Q96M96 766 aa9.38□□□□□ -0.91
LPCAT3-213ENST00000620843 APBA2Q99767 749 aa9.38□□□□□ -0.91
LPCAT3-213ENST00000620843 KANSL2Q9H9L4 492 aa9.38□□□□□ -0.91
LPCAT3-213ENST00000620843 ZNF451Q9Y4E5 1061 aa9.38□□□□□ -0.91
LPCAT3-213ENST00000620843 TCEAL1Q15170 157 aa9.37□□□□□ -0.91
LPCAT3-213ENST00000620843 NBPF9Q3BBW0 867 aa9.37□□□□□ -0.91
LPCAT3-213ENST00000620843 ANKRD39Q53RE8 183 aa9.37□□□□□ -0.91
LPCAT3-213ENST00000620843 RNF43Q68DV7 783 aa9.37□□□□□ -0.91
LPCAT3-213ENST00000620843 ZNF765Q7L2R6 523 aa9.37□□□□□ -0.91
LPCAT3-213ENST00000620843 HEXIM2Q96MH2 286 aaKnown RBP9.37□□□□□ -0.91
LPCAT3-213ENST00000620843 GBP3Q9H0R5 595 aa9.37□□□□□ -0.91
LPCAT3-213ENST00000620843 APEX2Q9UBZ4 518 aa9.37□□□□□ -0.91
LPCAT3-213ENST00000620843 GTF2IRD1Q9UHL9 959 aa9.37□□□□□ -0.91
LPCAT3-213ENST00000620843 FBXL21Q9UKT6 434 aa9.37□□□□□ -0.91
LPCAT3-213ENST00000620843 PCDHB12Q9Y5F1 795 aa9.37□□□□□ -0.91
LPCAT3-213ENST00000620843 CBX7O95931 251 aa9.36□□□□□ -0.91
LPCAT3-213ENST00000620843 CD247P20963 164 aa9.36□□□□□ -0.91
LPCAT3-213ENST00000620843 CYP27C1Q4G0S4 372 aa9.36□□□□□ -0.91
LPCAT3-213ENST00000620843 ADAT2Q7Z6V5 191 aaKnown RBP9.36□□□□□ -0.91
LPCAT3-213ENST00000620843 TMEM151AQ8N4L1 468 aa9.36□□□□□ -0.91
LPCAT3-213ENST00000620843 PPP1R14AQ96A00 147 aa9.36□□□□□ -0.91
LPCAT3-213ENST00000620843 COX4I2Q96KJ9 171 aa9.36□□□□□ -0.91
LPCAT3-213ENST00000620843 GP6Q9HCN6 339 aa9.36□□□□□ -0.91
LPCAT3-213ENST00000620843 F13BP05160 661 aa9.35□□□□□ -0.91
LPCAT3-213ENST00000620843 SNW1Q13573 536 aaKnown RBP9.35□□□□□ -0.91
LPCAT3-213ENST00000620843 THAP3Q8WTV1 239 aaPredicted RBP9.35□□□□□ -0.91
LPCAT3-213ENST00000620843 Q96M66 194 aa9.35□□□□□ -0.91
LPCAT3-213ENST00000620843 SPATA9Q9BWV2 254 aa9.35□□□□□ -0.91
LPCAT3-213ENST00000620843 WHRNQ9P202 907 aa9.35□□□□□ -0.91
LPCAT3-213ENST00000620843 SUGT1Q9Y2Z0 365 aa9.35□□□□□ -0.91
LPCAT3-213ENST00000620843 IQCA1LA6NCM1 817 aa9.34□□□□□ -0.91
LPCAT3-213ENST00000620843 PRR33A8MZF0 331 aa9.34□□□□□ -0.91
LPCAT3-213ENST00000620843 AGRPO00253 132 aa9.34□□□□□ -0.91
LPCAT3-213ENST00000620843 ITGA4P13612 1032 aa9.34□□□□□ -0.91
LPCAT3-213ENST00000620843 CANXP27824 592 aaKnown RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms