RNA–Protein interactions for RNA: ENST00000620632.4

TARDBP-223, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-223ENST00000620632 RBM8AQ9Y5S9 174 aaKnown RBP12.79□□□□□ -0.36
TARDBP-223ENST00000620632 CENPFP49454 3210 aa12.79□□□□□ -0.36
TARDBP-223ENST00000620632 B4E1Z4 1266 aa12.78□□□□□ -0.36
TARDBP-223ENST00000620632 BCRP11274 1271 aa12.78□□□□□ -0.36
TARDBP-223ENST00000620632 CTGFP29279 349 aa12.78□□□□□ -0.36
TARDBP-223ENST00000620632 NOVP48745 357 aa12.78□□□□□ -0.36
TARDBP-223ENST00000620632 COL9A3Q14050 684 aaPredicted RBP12.78□□□□□ -0.36
TARDBP-223ENST00000620632 RASGRP2Q7LDG7 609 aa12.78□□□□□ -0.36
TARDBP-223ENST00000620632 LRRC47Q8N1G4 583 aaKnown RBP12.78□□□□□ -0.36
TARDBP-223ENST00000620632 RPAP3Q9H6T3 665 aaPredicted RBP12.78□□□□□ -0.36
TARDBP-223ENST00000620632 ANO2Q9NQ90 1003 aa12.78□□□□□ -0.36
TARDBP-223ENST00000620632 CLIP2Q9UDT6 1046 aa12.78□□□□□ -0.36
TARDBP-223ENST00000620632 CTNNA3Q9UI47 895 aa12.78□□□□□ -0.36
TARDBP-223ENST00000620632 U3KPZ7 1027 aaPredicted RBP12.78□□□□□ -0.36
TARDBP-223ENST00000620632 PLXNB2O15031 1838 aa12.77□□□□□ -0.37
TARDBP-223ENST00000620632 FKTNO75072 461 aa12.77□□□□□ -0.37
TARDBP-223ENST00000620632 PCP11498 1178 aaKnown RBP12.77□□□□□ -0.37
TARDBP-223ENST00000620632 NECTIN1Q15223 517 aa12.77□□□□□ -0.37
TARDBP-223ENST00000620632 CATSPERGQ6ZRH7 1159 aa12.77□□□□□ -0.37
TARDBP-223ENST00000620632 CD99L2Q8TCZ2 262 aa12.77□□□□□ -0.37
TARDBP-223ENST00000620632 MKL1Q969V6 931 aa12.77□□□□□ -0.37
TARDBP-223ENST00000620632 NUP88Q99567 741 aaPredicted RBP12.77□□□□□ -0.37
TARDBP-223ENST00000620632 P2RX7Q99572 595 aaKnown RBP12.77□□□□□ -0.37
TARDBP-223ENST00000620632 ZKSCAN3Q9BRR0 538 aa12.77□□□□□ -0.37
TARDBP-223ENST00000620632 ARHGAP39Q9C0H5 1083 aa12.77□□□□□ -0.37
TARDBP-223ENST00000620632 RNF41Q9H4P4 317 aaPredicted RBP12.77□□□□□ -0.37
TARDBP-223ENST00000620632 KDM4AO75164 1064 aa12.76□□□□□ -0.37
TARDBP-223ENST00000620632 ECM2O94769 699 aaPredicted RBP12.76□□□□□ -0.37
TARDBP-223ENST00000620632 TTLL1O95922 423 aa12.76□□□□□ -0.37
TARDBP-223ENST00000620632 NDUFB10O96000 172 aa12.76□□□□□ -0.37
TARDBP-223ENST00000620632 OSBPP22059 807 aa12.76□□□□□ -0.37
TARDBP-223ENST00000620632 HERVK_113P62684 666 aa12.76□□□□□ -0.37
TARDBP-223ENST00000620632 SP3Q02447 781 aa12.76□□□□□ -0.37
TARDBP-223ENST00000620632 RCSD1Q6JBY9 416 aa12.76□□□□□ -0.37
TARDBP-223ENST00000620632 KIAA1211Q6ZU35 1233 aa12.76□□□□□ -0.37
TARDBP-223ENST00000620632 CYB5R4Q7L1T6 521 aa12.76□□□□□ -0.37
TARDBP-223ENST00000620632 ANKRD13CQ8N6S4 541 aa12.76□□□□□ -0.37
TARDBP-223ENST00000620632 TXNRD2Q9NNW7 524 aa12.76□□□□□ -0.37
TARDBP-223ENST00000620632 ZSWIM5Q9P217 1185 aa12.76□□□□□ -0.37
TARDBP-223ENST00000620632 PNMA3Q9UL41 463 aa12.76□□□□□ -0.37
TARDBP-223ENST00000620632 SMCHD1A6NHR9 2005 aa12.75□□□□□ -0.37
TARDBP-223ENST00000620632 SPDYE16A6NNV3 312 aaPredicted RBP12.75□□□□□ -0.37
TARDBP-223ENST00000620632 USP17L15C9J2P7 530 aa12.75□□□□□ -0.37
TARDBP-223ENST00000620632 USP17L13C9JLJ4 530 aa12.75□□□□□ -0.37
TARDBP-223ENST00000620632 USP17L11C9JVI0 530 aa12.75□□□□□ -0.37
TARDBP-223ENST00000620632 USP17L18D6R9N7 530 aa12.75□□□□□ -0.37
TARDBP-223ENST00000620632 USP17L22D6RA61 530 aa12.75□□□□□ -0.37
TARDBP-223ENST00000620632 USP17L17D6RBQ6 530 aa12.75□□□□□ -0.37
TARDBP-223ENST00000620632 USP17L19D6RCP7 530 aa12.75□□□□□ -0.37
TARDBP-223ENST00000620632 USP17L20D6RJB6 530 aa12.75□□□□□ -0.37
TARDBP-223ENST00000620632 E7EWF7 191 aa12.75□□□□□ -0.37
TARDBP-223ENST00000620632 F5H6K3 240 aa12.75□□□□□ -0.37
TARDBP-223ENST00000620632 SLC27A2O14975 620 aa12.75□□□□□ -0.37
TARDBP-223ENST00000620632 CNMDO75829 334 aa12.75□□□□□ -0.37
TARDBP-223ENST00000620632 IRX3P78415 501 aaPredicted RBP12.75□□□□□ -0.37
TARDBP-223ENST00000620632 KLRC3Q07444 240 aa12.75□□□□□ -0.37
TARDBP-223ENST00000620632 USP17L24Q0WX57 530 aa12.75□□□□□ -0.37
TARDBP-223ENST00000620632 PABPC4Q13310 644 aaKnown RBP eCLIP12.75□□□□□ -0.37
TARDBP-223ENST00000620632 FAM83BQ5T0W9 1011 aa12.75□□□□□ -0.37
TARDBP-223ENST00000620632 CREB3L3Q68CJ9 461 aa12.75□□□□□ -0.37
TARDBP-223ENST00000620632 CASC1Q6TDU7 716 aa12.75□□□□□ -0.37
TARDBP-223ENST00000620632 SMCR8Q8TEV9 937 aaPredicted RBP12.75□□□□□ -0.37
TARDBP-223ENST00000620632 LPAR1Q92633 364 aa12.75□□□□□ -0.37
TARDBP-223ENST00000620632 ESR2Q92731 530 aa12.75□□□□□ -0.37
TARDBP-223ENST00000620632 CHMP4CQ96CF2 233 aa12.75□□□□□ -0.37
TARDBP-223ENST00000620632 SH2D4AQ9H788 454 aa12.75□□□□□ -0.37
TARDBP-223ENST00000620632 GOPCQ9HD26 462 aa12.75□□□□□ -0.37
TARDBP-223ENST00000620632 TCP11L1Q9NUJ3 509 aa12.75□□□□□ -0.37
TARDBP-223ENST00000620632 FBXO28Q9NVF7 368 aa12.75□□□□□ -0.37
TARDBP-223ENST00000620632 STX8Q9UNK0 236 aa12.75□□□□□ -0.37
TARDBP-223ENST00000620632 WDR46O15213 610 aaKnown RBP12.74□□□□□ -0.37
TARDBP-223ENST00000620632 RAD21O60216 631 aa12.74□□□□□ -0.37
TARDBP-223ENST00000620632 LACTBP83111 547 aaPredicted RBP12.74□□□□□ -0.37
TARDBP-223ENST00000620632 GMCL1P1Q8NEA9 526 aa12.74□□□□□ -0.37
TARDBP-223ENST00000620632 TMEM47Q9BQJ4 181 aa12.74□□□□□ -0.37
TARDBP-223ENST00000620632 TANGO6Q9C0B7 1094 aa12.74□□□□□ -0.37
TARDBP-223ENST00000620632 RBPJLQ9UBG7 517 aa12.74□□□□□ -0.37
TARDBP-223ENST00000620632 ANTXR2P58335 489 aa12.73□□□□□ -0.37
TARDBP-223ENST00000620632 FAM110CQ1W6H9 321 aa12.73□□□□□ -0.37
TARDBP-223ENST00000620632 Q3C1V9 767 aa12.73□□□□□ -0.37
TARDBP-223ENST00000620632 MB21D2Q8IYB1 491 aaPredicted RBP12.73□□□□□ -0.37
TARDBP-223ENST00000620632 RASEFQ8IZ41 740 aa12.73□□□□□ -0.37
TARDBP-223ENST00000620632 ENAHQ8N8S7 591 aaPredicted RBP12.73□□□□□ -0.37
TARDBP-223ENST00000620632 ERO1AQ96HE7 468 aa12.73□□□□□ -0.37
TARDBP-223ENST00000620632 KRT23Q9C075 422 aa12.73□□□□□ -0.37
TARDBP-223ENST00000620632 CNNM2Q9H8M5 875 aa12.73□□□□□ -0.37
TARDBP-223ENST00000620632 BTBD7Q9P203 1132 aa12.73□□□□□ -0.37
TARDBP-223ENST00000620632 MORF4L1Q9UBU8 362 aa12.73□□□□□ -0.37
TARDBP-223ENST00000620632 SYNPO2Q9UMS6 1093 aa12.73□□□□□ -0.37
TARDBP-223ENST00000620632 ZNFX1Q9P2E3 1918 aaKnown RBP12.72□□□□□ -0.37
TARDBP-223ENST00000620632 TNKSO95271 1327 aa12.72□□□□□ -0.37
TARDBP-223ENST00000620632 DSG3P32926 999 aa12.72□□□□□ -0.37
TARDBP-223ENST00000620632 GCLCP48506 637 aaPredicted RBP12.72□□□□□ -0.37
TARDBP-223ENST00000620632 COG2Q14746 738 aa12.72□□□□□ -0.37
TARDBP-223ENST00000620632 SEC23AQ15436 765 aa12.72□□□□□ -0.37
TARDBP-223ENST00000620632 SLFN13Q68D06 897 aa12.72□□□□□ -0.37
TARDBP-223ENST00000620632 LBX2Q6XYB7 198 aa12.72□□□□□ -0.37
TARDBP-223ENST00000620632 CHST3Q7LGC8 479 aa12.72□□□□□ -0.37
TARDBP-223ENST00000620632 OTOP1Q7RTM1 612 aa12.72□□□□□ -0.37
TARDBP-223ENST00000620632 CTU1Q7Z7A3 348 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms