RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 NEK11Q8NG66 645 aa14.86□□□□□ -0.03
SKP2-209ENST00000620197 SYMPKQ92797 1274 aaKnown RBP14.86□□□□□ -0.03
SKP2-209ENST00000620197 RAD51AP2Q09MP3 1159 aa14.86□□□□□ -0.03
SKP2-209ENST00000620197 KARSQ15046 597 aaKnown RBP14.86□□□□□ -0.03
SKP2-209ENST00000620197 IL17AQ16552 155 aa14.86□□□□□ -0.03
SKP2-209ENST00000620197 CEP112Q8N8E3 955 aa14.86□□□□□ -0.03
SKP2-209ENST00000620197 CCDC12Q8WUD4 166 aaPredicted RBP14.86□□□□□ -0.03
SKP2-209ENST00000620197 SBF2Q86WG5 1849 aa14.85□□□□□ -0.03
SKP2-209ENST00000620197 STARD3NLO95772 234 aa14.85□□□□□ -0.03
SKP2-209ENST00000620197 SLC5A1P13866 664 aa14.85□□□□□ -0.03
SKP2-209ENST00000620197 TEX35Q5T0J7 233 aa14.85□□□□□ -0.03
SKP2-209ENST00000620197 WDR93Q6P2C0 686 aa14.85□□□□□ -0.03
SKP2-209ENST00000620197 PDILTQ8N807 584 aa14.85□□□□□ -0.03
SKP2-209ENST00000620197 CABP5Q9NP86 173 aa14.85□□□□□ -0.03
SKP2-209ENST00000620197 ABHD10Q9NUJ1 306 aa14.85□□□□□ -0.03
SKP2-209ENST00000620197 REXO2Q9Y3B8 237 aaKnown RBP14.85□□□□□ -0.03
SKP2-209ENST00000620197 TAF1P21675 1872 aa14.85□□□□□ -0.03
SKP2-209ENST00000620197 STRCQ7RTU9 1775 aa14.85□□□□□ -0.03
SKP2-209ENST00000620197 PPARAQ07869 468 aa14.85□□□□□ -0.03
SKP2-209ENST00000620197 CNGA4Q8IV77 575 aa14.85□□□□□ -0.03
SKP2-209ENST00000620197 RWDD2AQ9UIY3 292 aa14.85□□□□□ -0.03
SKP2-209ENST00000620197 TTF2Q9UNY4 1162 aaKnown RBP14.85□□□□□ -0.03
SKP2-209ENST00000620197 CCDC88AQ3V6T2 1871 aa14.85□□□□□ -0.03
SKP2-209ENST00000620197 POTEB2H3BUK9 544 aa14.84□□□□□ -0.03
SKP2-209ENST00000620197 BMP15O95972 392 aa14.84□□□□□ -0.03
SKP2-209ENST00000620197 CASP14P31944 242 aa14.84□□□□□ -0.03
SKP2-209ENST00000620197 TROAPQ12815 778 aa14.84□□□□□ -0.03
SKP2-209ENST00000620197 FAM177A1Q8N128 213 aaPredicted RBP14.84□□□□□ -0.03
SKP2-209ENST00000620197 CMTR1Q8N1G2 835 aaKnown RBP14.84□□□□□ -0.03
SKP2-209ENST00000620197 ENAHQ8N8S7 591 aaPredicted RBP14.84□□□□□ -0.03
SKP2-209ENST00000620197 RIOK1Q9BRS2 568 aaKnown RBP14.84□□□□□ -0.03
SKP2-209ENST00000620197 ADAM21Q9UKJ8 722 aa14.84□□□□□ -0.03
SKP2-209ENST00000620197 ZC3H4Q9UPT8 1303 aaKnown RBP14.84□□□□□ -0.03
SKP2-209ENST00000620197 TRIM75PA6NK02 468 aa14.84□□□□□ -0.03
SKP2-209ENST00000620197 C4orf32Q8N8J7 132 aa14.84□□□□□ -0.03
SKP2-209ENST00000620197 FEZ2Q9UHY8 353 aaPredicted RBP14.84□□□□□ -0.03
SKP2-209ENST00000620197 DDX60LQ5H9U9 1706 aaKnown RBP14.84□□□□□ -0.03
SKP2-209ENST00000620197 CDK5RAP2Q96SN8 1893 aa14.84□□□□□ -0.03
SKP2-209ENST00000620197 POLR3GO15318 223 aaPredicted RBP14.84□□□□□ -0.03
SKP2-209ENST00000620197 CDK11BP21127 795 aaKnown RBP14.84□□□□□ -0.03
SKP2-209ENST00000620197 KRT31Q15323 416 aa14.84□□□□□ -0.03
SKP2-209ENST00000620197 ZKSCAN3Q9BRR0 538 aa14.84□□□□□ -0.03
SKP2-209ENST00000620197 IQSEC3Q9UPP2 1182 aaPredicted RBP14.84□□□□□ -0.03
SKP2-209ENST00000620197 TNKSO95271 1327 aa14.84□□□□□ -0.03
SKP2-209ENST00000620197 SART3Q15020 963 aaKnown RBP14.83□□□□□ -0.03
SKP2-209ENST00000620197 WHAMMP3Q1A5X7 153 aa14.83□□□□□ -0.03
SKP2-209ENST00000620197 IRF2BP1Q8IU81 584 aa14.83□□□□□ -0.03
SKP2-209ENST00000620197 RNF41Q9H4P4 317 aaPredicted RBP14.83□□□□□ -0.03
SKP2-209ENST00000620197 CNTNAP5Q8WYK1 1306 aa14.83□□□□□ -0.04
SKP2-209ENST00000620197 COL24A1Q17RW2 1714 aa14.83□□□□□ -0.04
SKP2-209ENST00000620197 GPTP24298 496 aa14.83□□□□□ -0.04
SKP2-209ENST00000620197 KRT2P35908 639 aa14.83□□□□□ -0.04
SKP2-209ENST00000620197 NOM1Q5C9Z4 860 aaKnown RBP14.83□□□□□ -0.04
SKP2-209ENST00000620197 TMTC1Q8IUR5 882 aa14.83□□□□□ -0.04
SKP2-209ENST00000620197 CCDC34Q96HJ3 373 aa14.83□□□□□ -0.04
SKP2-209ENST00000620197 PRDM11Q9NQV5 511 aa14.83□□□□□ -0.04
SKP2-209ENST00000620197 SLC4A4Q9Y6R1 1079 aa14.83□□□□□ -0.04
SKP2-209ENST00000620197 CASP1P29466 404 aa14.83□□□□□ -0.04
SKP2-209ENST00000620197 IL6STP40189 918 aaPredicted RBP14.83□□□□□ -0.04
SKP2-209ENST00000620197 LZTFL1Q9NQ48 299 aa14.83□□□□□ -0.04
SKP2-209ENST00000620197 SMIM22K7EJ46 135 aa14.82□□□□□ -0.04
SKP2-209ENST00000620197 TRIM14Q14142 442 aa14.82□□□□□ -0.04
SKP2-209ENST00000620197 ZNF384Q8TF68 577 aa14.82□□□□□ -0.04
SKP2-209ENST00000620197 DNAJC7Q99615 494 aa14.82□□□□□ -0.04
SKP2-209ENST00000620197 ZBTB1Q9Y2K1 713 aa14.82□□□□□ -0.04
SKP2-209ENST00000620197 ATAD5Q96QE3 1844 aa14.82□□□□□ -0.04
SKP2-209ENST00000620197 VGLL3A8MV65 326 aa14.82□□□□□ -0.04
SKP2-209ENST00000620197 PSMD14O00487 310 aa14.82□□□□□ -0.04
SKP2-209ENST00000620197 KIF5CO60282 957 aa14.82□□□□□ -0.04
SKP2-209ENST00000620197 AARSP49588 968 aaKnown RBP eCLIP14.82□□□□□ -0.04
SKP2-209ENST00000620197 TRAPPC11Q7Z392 1133 aa14.82□□□□□ -0.04
SKP2-209ENST00000620197 GOLGA5Q8TBA6 731 aa14.82□□□□□ -0.04
SKP2-209ENST00000620197 ZNF507Q8TCN5 953 aa14.82□□□□□ -0.04
SKP2-209ENST00000620197 NACAP1Q9BZK3 213 aa14.82□□□□□ -0.04
SKP2-209ENST00000620197 TRMT112Q9UI30 125 aaKnown RBP14.82□□□□□ -0.04
SKP2-209ENST00000620197 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.82□□□□□ -0.04
SKP2-209ENST00000620197 M0R2N6 131 aa14.81□□□□□ -0.04
SKP2-209ENST00000620197 PCP11498 1178 aaKnown RBP14.81□□□□□ -0.04
SKP2-209ENST00000620197 TCP11X2Q5H9J9 407 aa14.81□□□□□ -0.04
SKP2-209ENST00000620197 HDXQ7Z353 690 aa14.81□□□□□ -0.04
SKP2-209ENST00000620197 SLC35F6Q8N357 371 aa14.81□□□□□ -0.04
SKP2-209ENST00000620197 ZSCAN10Q96SZ4 725 aaPredicted RBP14.81□□□□□ -0.04
SKP2-209ENST00000620197 VPS54Q9P1Q0 977 aa14.81□□□□□ -0.04
SKP2-209ENST00000620197 TRAPPC10P48553 1259 aa14.81□□□□□ -0.04
SKP2-209ENST00000620197 TMTC3Q6ZXV5 915 aa14.81□□□□□ -0.04
SKP2-209ENST00000620197 SMYD4Q8IYR2 804 aaPredicted RBP14.81□□□□□ -0.04
SKP2-209ENST00000620197 ACRBPQ8NEB7 543 aa14.81□□□□□ -0.04
SKP2-209ENST00000620197 BRIP1Q9BX63 1249 aa14.81□□□□□ -0.04
SKP2-209ENST00000620197 RBM28Q9NW13 759 aaKnown RBP14.81□□□□□ -0.04
SKP2-209ENST00000620197 NRAPQ86VF7 1730 aa14.81□□□□□ -0.04
SKP2-209ENST00000620197 CTAGE9A4FU28 777 aa14.81□□□□□ -0.04
SKP2-209ENST00000620197 VSNL1P62760 191 aa14.81□□□□□ -0.04
SKP2-209ENST00000620197 PPFIBP1Q86W92 1011 aa14.81□□□□□ -0.04
SKP2-209ENST00000620197 TTYH3Q9C0H2 523 aa14.81□□□□□ -0.04
SKP2-209ENST00000620197 ADAMTS3O15072 1205 aa14.8□□□□□ -0.04
SKP2-209ENST00000620197 DDAH1O94760 285 aa14.8□□□□□ -0.04
SKP2-209ENST00000620197 PLEKHA8P1O95397 391 aa14.8□□□□□ -0.04
SKP2-209ENST00000620197 TFRCP02786 760 aaKnown RBP14.8□□□□□ -0.04
SKP2-209ENST00000620197 TUBBP07437 444 aa14.8□□□□□ -0.04
SKP2-209ENST00000620197 VIPAS39Q9H9C1 493 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms