RNA–Protein interactions for RNA: ENST00000619655.4

MMP28-207, Transcript of matrix metallopeptidase 28, humanhuman

TSL 2

Gene MMP28, Length 2,336 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-207ENST00000619655 NLRP5P59047 1200 aa23.18■■□□□ 1.3
MMP28-207ENST00000619655 TCP10Q12799 353 aa23.18■■□□□ 1.3
MMP28-207ENST00000619655 PFKFB3Q16875 520 aaPredicted RBP23.18■■□□□ 1.3
MMP28-207ENST00000619655 SHC4Q6S5L8 630 aa23.18■■□□□ 1.3
MMP28-207ENST00000619655 OSBPL5Q9H0X9 879 aaPredicted RBP23.18■■□□□ 1.3
MMP28-207ENST00000619655 ZNF202O95125 648 aa23.17■■□□□ 1.3
MMP28-207ENST00000619655 SPECC1Q5M775 1068 aa23.17■■□□□ 1.3
MMP28-207ENST00000619655 CPVLQ9H3G5 476 aa23.17■■□□□ 1.3
MMP28-207ENST00000619655 SLURP2P0DP57 97 aa23.17■■□□□ 1.3
MMP28-207ENST00000619655 KIAA2012Q0VF49 1180 aa23.17■■□□□ 1.3
MMP28-207ENST00000619655 NOM1Q5C9Z4 860 aaKnown RBP23.17■■□□□ 1.3
MMP28-207ENST00000619655 FBXO41Q8TF61 875 aa23.17■■□□□ 1.3
MMP28-207ENST00000619655 SERPINB13Q9UIV8 391 aa23.17■■□□□ 1.3
MMP28-207ENST00000619655 CLEC10AQ8IUN9 316 aa23.16■■□□□ 1.3
MMP28-207ENST00000619655 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.16■■□□□ 1.3
MMP28-207ENST00000619655 MYH8P13535 1937 aa23.16■■□□□ 1.3
MMP28-207ENST00000619655 AKR1B1P15121 316 aa23.16■■□□□ 1.3
MMP28-207ENST00000619655 ZFPM1Q8IX07 1006 aa23.16■■□□□ 1.3
MMP28-207ENST00000619655 TTLL6Q8N841 843 aa23.16■■□□□ 1.3
MMP28-207ENST00000619655 KRI1Q8N9T8 703 aaKnown RBP23.16■■□□□ 1.3
MMP28-207ENST00000619655 ZDHHC15Q96MV8 337 aa23.16■■□□□ 1.3
MMP28-207ENST00000619655 CBX8Q9HC52 389 aa23.16■■□□□ 1.3
MMP28-207ENST00000619655 RRAGDQ9NQL2 400 aaPredicted RBP23.16■■□□□ 1.3
MMP28-207ENST00000619655 SYKP43405 635 aa23.15■■□□□ 1.3
MMP28-207ENST00000619655 USP17L2Q6R6M4 530 aa23.15■■□□□ 1.3
MMP28-207ENST00000619655 C10orf71Q711Q0 1435 aa23.15■■□□□ 1.3
MMP28-207ENST00000619655 UTRNP46939 3433 aa23.15■■□□□ 1.3
MMP28-207ENST00000619655 ADCY5O95622 1261 aa23.15■■□□□ 1.3
MMP28-207ENST00000619655 ZNF165P49910 485 aa23.15■■□□□ 1.3
MMP28-207ENST00000619655 GNAQP50148 359 aa23.15■■□□□ 1.3
MMP28-207ENST00000619655 GRIN1Q05586 938 aa23.15■■□□□ 1.3
MMP28-207ENST00000619655 GABPAQ06546 454 aa23.15■■□□□ 1.3
MMP28-207ENST00000619655 NPY5RQ15761 445 aa23.15■■□□□ 1.3
MMP28-207ENST00000619655 KLRF2D3W0D1 207 aa23.14■■□□□ 1.3
MMP28-207ENST00000619655 CYTH3O43739 400 aa23.14■■□□□ 1.3
MMP28-207ENST00000619655 CUTAO60888 179 aa23.14■■□□□ 1.3
MMP28-207ENST00000619655 HLA-DOAP06340 250 aa23.14■■□□□ 1.3
MMP28-207ENST00000619655 ADAMTS3O15072 1205 aa23.14■■□□□ 1.29
MMP28-207ENST00000619655 TOP1P11387 765 aaKnown RBP23.14■■□□□ 1.29
MMP28-207ENST00000619655 DPEP1P16444 411 aa23.14■■□□□ 1.29
MMP28-207ENST00000619655 SLC35G1Q2M3R5 365 aa23.14■■□□□ 1.29
MMP28-207ENST00000619655 SUPT20HQ8NEM7 779 aa23.14■■□□□ 1.29
MMP28-207ENST00000619655 YDJCA8MPS7 323 aa23.13■■□□□ 1.29
MMP28-207ENST00000619655 MPHOSPH10O00566 681 aaKnown RBP23.13■■□□□ 1.29
MMP28-207ENST00000619655 PARP1P09874 1014 aaKnown RBP23.13■■□□□ 1.29
MMP28-207ENST00000619655 STX1AQ16623 288 aa23.13■■□□□ 1.29
MMP28-207ENST00000619655 RESP18Q5W5W9 173 aa23.13■■□□□ 1.29
MMP28-207ENST00000619655 CC2D2BQ6DHV5 1058 aa23.13■■□□□ 1.29
MMP28-207ENST00000619655 HEATR3Q7Z4Q2 680 aa23.13■■□□□ 1.29
MMP28-207ENST00000619655 ZSCAN29Q8IWY8 852 aaPredicted RBP23.13■■□□□ 1.29
MMP28-207ENST00000619655 LRRC47Q8N1G4 583 aaKnown RBP23.13■■□□□ 1.29
MMP28-207ENST00000619655 PALM3A6NDB9 673 aaPredicted RBP23.13■■□□□ 1.29
MMP28-207ENST00000619655 TRIM75PA6NK02 468 aa23.13■■□□□ 1.29
MMP28-207ENST00000619655 PIK3AP1Q6ZUJ8 805 aa23.13■■□□□ 1.29
MMP28-207ENST00000619655 C11orf57Q6ZUT1 292 aaPredicted RBP23.13■■□□□ 1.29
MMP28-207ENST00000619655 HOMER1Q86YM7 354 aa23.13■■□□□ 1.29
MMP28-207ENST00000619655 CEP131Q9UPN4 1083 aa23.13■■□□□ 1.29
MMP28-207ENST00000619655 FAM196BA6NMK8 535 aa23.12■■□□□ 1.29
MMP28-207ENST00000619655 ESPNB1AK53 854 aa23.12■■□□□ 1.29
MMP28-207ENST00000619655 WNT7AO00755 349 aa23.12■■□□□ 1.29
MMP28-207ENST00000619655 PTMAP06454 111 aaKnown RBP23.12■■□□□ 1.29
MMP28-207ENST00000619655 AP5Z1O43299 807 aa23.11■■□□□ 1.29
MMP28-207ENST00000619655 FKBP1AP62942 108 aaKnown RBP23.11■■□□□ 1.29
MMP28-207ENST00000619655 CCDC93Q567U6 631 aa23.11■■□□□ 1.29
MMP28-207ENST00000619655 VAT1LQ9HCJ6 419 aa23.11■■□□□ 1.29
MMP28-207ENST00000619655 MTMR4Q9NYA4 1195 aa23.11■■□□□ 1.29
MMP28-207ENST00000619655 FBXO2Q9UK22 296 aaPredicted RBP23.11■■□□□ 1.29
MMP28-207ENST00000619655 NOL7Q9UMY1 257 aaKnown RBP23.11■■□□□ 1.29
MMP28-207ENST00000619655 ZNF646O15015 1829 aaPredicted RBP23.11■■□□□ 1.29
MMP28-207ENST00000619655 USP17L5A8MUK1 530 aa23.11■■□□□ 1.29
MMP28-207ENST00000619655 ZBTB7AO95365 584 aa23.11■■□□□ 1.29
MMP28-207ENST00000619655 SHMT1P34896 483 aa23.11■■□□□ 1.29
MMP28-207ENST00000619655 ATP2B2Q01814 1243 aa23.11■■□□□ 1.29
MMP28-207ENST00000619655 ZRSR1Q15695 479 aaKnown RBP23.11■■□□□ 1.29
MMP28-207ENST00000619655 TNFRSF25Q93038 417 aa23.11■■□□□ 1.29
MMP28-207ENST00000619655 ZNF277Q9NRM2 450 aaPredicted RBP23.11■■□□□ 1.29
MMP28-207ENST00000619655 SWAP70Q9UH65 585 aa23.11■■□□□ 1.29
MMP28-207ENST00000619655 HPSEQ9Y251 543 aa23.11■■□□□ 1.29
MMP28-207ENST00000619655 FRMPD2Q68DX3 1309 aaPredicted RBP23.11■■□□□ 1.29
MMP28-207ENST00000619655 ZNF174Q15697 407 aa23.1■■□□□ 1.29
MMP28-207ENST00000619655 WWC2Q6AWC2 1192 aa23.1■■□□□ 1.29
MMP28-207ENST00000619655 TYW1BQ6NUM6 668 aa23.1■■□□□ 1.29
MMP28-207ENST00000619655 CLIP2Q9UDT6 1046 aa23.1■■□□□ 1.29
MMP28-207ENST00000619655 KCNH3Q9ULD8 1083 aa23.1■■□□□ 1.29
MMP28-207ENST00000619655 BIN1O00499 593 aa23.1■■□□□ 1.29
MMP28-207ENST00000619655 RASGRP4Q8TDF6 673 aa23.1■■□□□ 1.29
MMP28-207ENST00000619655 TDRD3Q9H7E2 651 aaKnown RBP23.1■■□□□ 1.29
MMP28-207ENST00000619655 KIAA1468Q9P260 1216 aa23.1■■□□□ 1.29
MMP28-207ENST00000619655 DDTLA6NHG4 134 aaPredicted RBP23.09■■□□□ 1.29
MMP28-207ENST00000619655 RAD17O75943 681 aa23.09■■□□□ 1.29
MMP28-207ENST00000619655 PTPREP23469 700 aa23.09■■□□□ 1.29
MMP28-207ENST00000619655 UBA5Q9GZZ9 404 aa23.09■■□□□ 1.29
MMP28-207ENST00000619655 FAM198AQ9UFP1 575 aa23.09■■□□□ 1.29
MMP28-207ENST00000619655 SERPINA10Q9UK55 444 aa23.09■■□□□ 1.29
MMP28-207ENST00000619655 KCNA3P22001 575 aa23.09■■□□□ 1.29
MMP28-207ENST00000619655 TTC38Q5R3I4 469 aa23.09■■□□□ 1.29
MMP28-207ENST00000619655 LARGE2Q8N3Y3 721 aa23.09■■□□□ 1.29
MMP28-207ENST00000619655 CFAP100Q494V2 611 aa23.08■■□□□ 1.29
MMP28-207ENST00000619655 BLIDQ8IZY5 108 aa23.08■■□□□ 1.29
MMP28-207ENST00000619655 ANO10Q9NW15 660 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms