RNA–Protein interactions for RNA: ENST00000619449.1

MALAT1-215, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 794 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-215ENST00000619449 KCNB2Q92953 911 aa21.44■■□□□ 1.02
MALAT1-215ENST00000619449 SH2D4AQ9H788 454 aa21.44■■□□□ 1.02
MALAT1-215ENST00000619449 CNNM2Q9H8M5 875 aa21.44■■□□□ 1.02
MALAT1-215ENST00000619449 TOMM22Q9NS69 142 aa21.44■■□□□ 1.02
MALAT1-215ENST00000619449 ZSWIM5Q9P217 1185 aa21.44■■□□□ 1.02
MALAT1-215ENST00000619449 CLIP2Q9UDT6 1046 aa21.44■■□□□ 1.02
MALAT1-215ENST00000619449 MYH4Q9Y623 1939 aa21.44■■□□□ 1.02
MALAT1-215ENST00000619449 KDM4AO75164 1064 aa21.43■■□□□ 1.02
MALAT1-215ENST00000619449 CTCFP49711 727 aaPredicted RBP21.43■■□□□ 1.02
MALAT1-215ENST00000619449 TSGA10IPQ3SY00 556 aa21.43■■□□□ 1.02
MALAT1-215ENST00000619449 LPAR1Q92633 364 aa21.43■■□□□ 1.02
MALAT1-215ENST00000619449 KRT23Q9C075 422 aa21.43■■□□□ 1.02
MALAT1-215ENST00000619449 TLR2O60603 784 aa21.42■■□□□ 1.02
MALAT1-215ENST00000619449 CYP2C8P10632 490 aa21.42■■□□□ 1.02
MALAT1-215ENST00000619449 COL9A3Q14050 684 aaPredicted RBP21.42■■□□□ 1.02
MALAT1-215ENST00000619449 POTEEQ6S8J3 1075 aa21.42■■□□□ 1.02
MALAT1-215ENST00000619449 CYB5R4Q7L1T6 521 aa21.42■■□□□ 1.02
MALAT1-215ENST00000619449 ASCC2Q9H1I8 757 aaPredicted RBP21.42■■□□□ 1.02
MALAT1-215ENST00000619449 ZFYVE28Q9HCC9 887 aa21.42■■□□□ 1.02
MALAT1-215ENST00000619449 RLFQ13129 1914 aa21.41■■□□□ 1.02
MALAT1-215ENST00000619449 REC8O95072 547 aa21.41■■□□□ 1.02
MALAT1-215ENST00000619449 ATP2B2Q01814 1243 aa21.41■■□□□ 1.02
MALAT1-215ENST00000619449 PABPC4Q13310 644 aaKnown RBP eCLIP21.41■■□□□ 1.02
MALAT1-215ENST00000619449 PPP4R3BQ5MIZ7 849 aa21.41■■□□□ 1.02
MALAT1-215ENST00000619449 C17orf99Q6UX52 265 aa21.41■■□□□ 1.02
MALAT1-215ENST00000619449 CATSPERGQ6ZRH7 1159 aa21.41■■□□□ 1.02
MALAT1-215ENST00000619449 MB21D2Q8IYB1 491 aaPredicted RBP21.41■■□□□ 1.02
MALAT1-215ENST00000619449 RASEFQ8IZ41 740 aa21.41■■□□□ 1.02
MALAT1-215ENST00000619449 GMCL1P1Q8NEA9 526 aa21.41■■□□□ 1.02
MALAT1-215ENST00000619449 ANKS1AQ92625 1134 aa21.41■■□□□ 1.02
MALAT1-215ENST00000619449 TTC14Q96N46 770 aa21.41■■□□□ 1.02
MALAT1-215ENST00000619449 PARK7Q99497 189 aaKnown RBP21.41■■□□□ 1.02
MALAT1-215ENST00000619449 F5H6K3 240 aa21.4■■□□□ 1.02
MALAT1-215ENST00000619449 GPR25O00155 361 aa21.4■■□□□ 1.02
MALAT1-215ENST00000619449 HSPA4P34932 840 aa21.4■■□□□ 1.02
MALAT1-215ENST00000619449 KLRC3Q07444 240 aa21.4■■□□□ 1.02
MALAT1-215ENST00000619449 USP26Q9BXU7 913 aa21.4■■□□□ 1.02
MALAT1-215ENST00000619449 RPAP3Q9H6T3 665 aaPredicted RBP21.4■■□□□ 1.02
MALAT1-215ENST00000619449 GOPCQ9HD26 462 aa21.4■■□□□ 1.02
MALAT1-215ENST00000619449 USP17L15C9J2P7 530 aa21.39■■□□□ 1.01
MALAT1-215ENST00000619449 USP17L13C9JLJ4 530 aa21.39■■□□□ 1.01
MALAT1-215ENST00000619449 USP17L11C9JVI0 530 aa21.39■■□□□ 1.01
MALAT1-215ENST00000619449 USP17L18D6R9N7 530 aa21.39■■□□□ 1.01
MALAT1-215ENST00000619449 USP17L22D6RA61 530 aa21.39■■□□□ 1.01
MALAT1-215ENST00000619449 USP17L17D6RBQ6 530 aa21.39■■□□□ 1.01
MALAT1-215ENST00000619449 USP17L19D6RCP7 530 aa21.39■■□□□ 1.01
MALAT1-215ENST00000619449 USP17L20D6RJB6 530 aa21.39■■□□□ 1.01
MALAT1-215ENST00000619449 WDR46O15213 610 aaKnown RBP21.39■■□□□ 1.01
MALAT1-215ENST00000619449 NDUFB10O96000 172 aa21.39■■□□□ 1.01
MALAT1-215ENST00000619449 BCRP11274 1271 aa21.39■■□□□ 1.01
MALAT1-215ENST00000619449 LBX1P52954 281 aa21.39■■□□□ 1.01
MALAT1-215ENST00000619449 ANTXR2P58335 489 aa21.39■■□□□ 1.01
MALAT1-215ENST00000619449 USP17L24Q0WX57 530 aa21.39■■□□□ 1.01
MALAT1-215ENST00000619449 SEC23AQ15436 765 aa21.39■■□□□ 1.01
MALAT1-215ENST00000619449 DGKHQ86XP1 1220 aa21.39■■□□□ 1.01
MALAT1-215ENST00000619449 SPICE1Q8N0Z3 855 aa21.39■■□□□ 1.01
MALAT1-215ENST00000619449 LRRC47Q8N1G4 583 aaKnown RBP21.39■■□□□ 1.01
MALAT1-215ENST00000619449 NCOA7Q8NI08 942 aa21.39■■□□□ 1.01
MALAT1-215ENST00000619449 P2RX7Q99572 595 aaKnown RBP21.39■■□□□ 1.01
MALAT1-215ENST00000619449 TMEM47Q9BQJ4 181 aa21.39■■□□□ 1.01
MALAT1-215ENST00000619449 ZKSCAN3Q9BRR0 538 aa21.39■■□□□ 1.01
MALAT1-215ENST00000619449 PNMA3Q9UL41 463 aa21.39■■□□□ 1.01
MALAT1-215ENST00000619449 STX8Q9UNK0 236 aa21.39■■□□□ 1.01
MALAT1-215ENST00000619449 PARP14Q460N5 1801 aa21.39■■□□□ 1.01
MALAT1-215ENST00000619449 C8orf34Q49A92 452 aa21.38■■□□□ 1.01
MALAT1-215ENST00000619449 LBX2Q6XYB7 198 aa21.38■■□□□ 1.01
MALAT1-215ENST00000619449 ENAHQ8N8S7 591 aaPredicted RBP21.38■■□□□ 1.01
MALAT1-215ENST00000619449 ZSCAN10Q96SZ4 725 aaPredicted RBP21.38■■□□□ 1.01
MALAT1-215ENST00000619449 TOP1P11387 765 aaKnown RBP21.37■■□□□ 1.01
MALAT1-215ENST00000619449 OSBPP22059 807 aa21.37■■□□□ 1.01
MALAT1-215ENST00000619449 TRDNQ13061 729 aa21.37■■□□□ 1.01
MALAT1-215ENST00000619449 CCDC178Q5BJE1 867 aa21.37■■□□□ 1.01
MALAT1-215ENST00000619449 RNF20Q5VTR2 975 aa21.37■■□□□ 1.01
MALAT1-215ENST00000619449 IQCA1Q86XH1 822 aa21.37■■□□□ 1.01
MALAT1-215ENST00000619449 ZNF296Q8WUU4 475 aaPredicted RBP21.37■■□□□ 1.01
MALAT1-215ENST00000619449 PRDM10Q9NQV6 1147 aa21.37■■□□□ 1.01
MALAT1-215ENST00000619449 TNKSO95271 1327 aa21.36■■□□□ 1.01
MALAT1-215ENST00000619449 HERVK_113P62684 666 aa21.36■■□□□ 1.01
MALAT1-215ENST00000619449 CAP1Q01518 475 aa21.36■■□□□ 1.01
MALAT1-215ENST00000619449 ADCK5Q3MIX3 580 aa21.36■■□□□ 1.01
MALAT1-215ENST00000619449 GMCL1Q96IK5 515 aa21.36■■□□□ 1.01
MALAT1-215ENST00000619449 SEC24BO95487 1268 aa21.35■■□□□ 1.01
MALAT1-215ENST00000619449 IRX3P78415 501 aaPredicted RBP21.35■■□□□ 1.01
MALAT1-215ENST00000619449 FAM83BQ5T0W9 1011 aa21.35■■□□□ 1.01
MALAT1-215ENST00000619449 RALYLQ86SE5 291 aaKnown RBP21.35■■□□□ 1.01
MALAT1-215ENST00000619449 IGDCC4Q8TDY8 1250 aa21.35■■□□□ 1.01
MALAT1-215ENST00000619449 NUP88Q99567 741 aaPredicted RBP21.35■■□□□ 1.01
MALAT1-215ENST00000619449 MTA3Q9BTC8 594 aa21.35■■□□□ 1.01
MALAT1-215ENST00000619449 CPA4Q9UI42 421 aa21.35■■□□□ 1.01
MALAT1-215ENST00000619449 ADAMTS5Q9UNA0 930 aa21.35■■□□□ 1.01
MALAT1-215ENST00000619449 SNX14Q9Y5W7 946 aa21.35■■□□□ 1.01
MALAT1-215ENST00000619449 A0A0G2JMZ2 1700 aa21.35■■□□□ 1.01
MALAT1-215ENST00000619449 MYPNQ86TC9 1320 aa21.34■■□□□ 1.01
MALAT1-215ENST00000619449 SPDYE16A6NNV3 312 aaPredicted RBP21.34■■□□□ 1.01
MALAT1-215ENST00000619449 SNHG28P0DPA3 235 aa21.34■■□□□ 1.01
MALAT1-215ENST00000619449 GCLCP48506 637 aaPredicted RBP21.34■■□□□ 1.01
MALAT1-215ENST00000619449 COG2Q14746 738 aa21.34■■□□□ 1.01
MALAT1-215ENST00000619449 SLFN13Q68D06 897 aa21.34■■□□□ 1.01
MALAT1-215ENST00000619449 RASGRP2Q7LDG7 609 aa21.34■■□□□ 1.01
MALAT1-215ENST00000619449 RBPJLQ9UBG7 517 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms