RNA–Protein interactions for RNA: ENST00000619138.4

CNTNAP3B-215, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 3,840 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-215ENST00000619138 RFX5P48382 616 aaPredicted RBP15.47■□□□□ 0.07
CNTNAP3B-215ENST00000619138 CTSWP56202 376 aa15.47■□□□□ 0.07
CNTNAP3B-215ENST00000619138 KCTD19Q17RG1 926 aaPredicted RBP15.47■□□□□ 0.07
CNTNAP3B-215ENST00000619138 TMEM139Q8IV31 216 aa15.47■□□□□ 0.07
CNTNAP3B-215ENST00000619138 PUS7LQ9H0K6 701 aaKnown RBP15.47■□□□□ 0.07
CNTNAP3B-215ENST00000619138 GNL3LQ9NVN8 582 aaKnown RBP15.47■□□□□ 0.07
CNTNAP3B-215ENST00000619138 IPO7O95373 1038 aaKnown RBP15.47■□□□□ 0.07
CNTNAP3B-215ENST00000619138 RABL6Q3YEC7 729 aaPredicted RBP15.47■□□□□ 0.07
CNTNAP3B-215ENST00000619138 RRAGBQ5VZM2 374 aa15.47■□□□□ 0.07
CNTNAP3B-215ENST00000619138 BPIFA3Q9BQP9 254 aa15.47■□□□□ 0.07
CNTNAP3B-215ENST00000619138 MYO6Q9UM54 1294 aa15.47■□□□□ 0.07
CNTNAP3B-215ENST00000619138 L1RE1Q9UN81 338 aa15.47■□□□□ 0.07
CNTNAP3B-215ENST00000619138 GOLGA6CA6NDK9 693 aa15.46■□□□□ 0.07
CNTNAP3B-215ENST00000619138 ERVV-1B6SEH8 477 aa15.46■□□□□ 0.07
CNTNAP3B-215ENST00000619138 GOLGA6DP0CG33 693 aa15.46■□□□□ 0.07
CNTNAP3B-215ENST00000619138 ZAP70P43403 619 aa15.46■□□□□ 0.07
CNTNAP3B-215ENST00000619138 TDO2P48775 406 aa15.46■□□□□ 0.07
CNTNAP3B-215ENST00000619138 SND1Q7KZF4 910 aaKnown RBP eCLIP15.46■□□□□ 0.07
CNTNAP3B-215ENST00000619138 TTLL11Q8NHH1 800 aa15.46■□□□□ 0.07
CNTNAP3B-215ENST00000619138 ALDH8A1Q9H2A2 487 aaPredicted RBP15.46■□□□□ 0.07
CNTNAP3B-215ENST00000619138 GOLGA6AQ9NYA3 693 aa15.46■□□□□ 0.07
CNTNAP3B-215ENST00000619138 SHTN1A0MZ66 631 aa15.46■□□□□ 0.07
CNTNAP3B-215ENST00000619138 POTEB2H3BUK9 544 aa15.46■□□□□ 0.07
CNTNAP3B-215ENST00000619138 SNAP23O00161 211 aa15.46■□□□□ 0.07
CNTNAP3B-215ENST00000619138 GGCXP38435 758 aa15.46■□□□□ 0.07
CNTNAP3B-215ENST00000619138 FXR1P51114 621 aaKnown RBP eCLIP15.46■□□□□ 0.07
CNTNAP3B-215ENST00000619138 CCDC122Q5T0U0 273 aa15.46■□□□□ 0.07
CNTNAP3B-215ENST00000619138 TRAPPC3LQ5T215 181 aa15.46■□□□□ 0.07
CNTNAP3B-215ENST00000619138 FAM76AQ8TAV0 307 aa15.46■□□□□ 0.07
CNTNAP3B-215ENST00000619138 FAM71BQ8TC56 605 aa15.46■□□□□ 0.07
CNTNAP3B-215ENST00000619138 SECISBP2LQ93073 1101 aaKnown RBP15.46■□□□□ 0.07
CNTNAP3B-215ENST00000619138 SLC12A7Q9Y666 1083 aa15.46■□□□□ 0.07
CNTNAP3B-215ENST00000619138 ITGB4P16144 1822 aa15.46■□□□□ 0.07
CNTNAP3B-215ENST00000619138 KIAA0754O94854 1291 aa15.46■□□□□ 0.06
CNTNAP3B-215ENST00000619138 CAMTA2O94983 1202 aa15.46■□□□□ 0.06
CNTNAP3B-215ENST00000619138 SSRP1Q08945 709 aaKnown RBP15.46■□□□□ 0.06
CNTNAP3B-215ENST00000619138 DSCC1Q9BVC3 393 aa15.46■□□□□ 0.06
CNTNAP3B-215ENST00000619138 HELLSQ9NRZ9 838 aa15.46■□□□□ 0.06
CNTNAP3B-215ENST00000619138 CAPN7Q9Y6W3 813 aa15.46■□□□□ 0.06
CNTNAP3B-215ENST00000619138 FAM170AA1A519 330 aa15.45■□□□□ 0.06
CNTNAP3B-215ENST00000619138 GPAA1O43292 621 aa15.45■□□□□ 0.06
CNTNAP3B-215ENST00000619138 RNASE9P60153 205 aaKnown RBP15.45■□□□□ 0.06
CNTNAP3B-215ENST00000619138 ZMYM1Q5SVZ6 1142 aa15.45■□□□□ 0.06
CNTNAP3B-215ENST00000619138 DOT1LQ8TEK3 1739 aa15.45■□□□□ 0.06
CNTNAP3B-215ENST00000619138 GNGT1P63211 74 aa15.45■□□□□ 0.06
CNTNAP3B-215ENST00000619138 SLC7A5Q01650 507 aa15.45■□□□□ 0.06
CNTNAP3B-215ENST00000619138 ANKRD20A12PQ8NF67 263 aa15.45■□□□□ 0.06
CNTNAP3B-215ENST00000619138 EPSTI1Q96J88 318 aa15.45■□□□□ 0.06
CNTNAP3B-215ENST00000619138 PCDHB6Q9Y5E3 794 aa15.45■□□□□ 0.06
CNTNAP3B-215ENST00000619138 SYNRGQ9UMZ2 1314 aa15.45■□□□□ 0.06
CNTNAP3B-215ENST00000619138 CTDSPL2Q05D32 466 aa15.45■□□□□ 0.06
CNTNAP3B-215ENST00000619138 ENOX2Q16206 610 aaKnown RBP15.45■□□□□ 0.06
CNTNAP3B-215ENST00000619138 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.45■□□□□ 0.06
CNTNAP3B-215ENST00000619138 TADA2BQ86TJ2 420 aa15.45■□□□□ 0.06
CNTNAP3B-215ENST00000619138 TICAM2Q86XR7 235 aa15.45■□□□□ 0.06
CNTNAP3B-215ENST00000619138 SHANK3Q9BYB0 1731 aa15.45■□□□□ 0.06
CNTNAP3B-215ENST00000619138 FRMD3A2A2Y4 597 aa15.44■□□□□ 0.06
CNTNAP3B-215ENST00000619138 ZNF185O15231 689 aa15.44■□□□□ 0.06
CNTNAP3B-215ENST00000619138 APBA3O96018 575 aa15.44■□□□□ 0.06
CNTNAP3B-215ENST00000619138 IGHMBP2P38935 993 aaKnown RBP15.44■□□□□ 0.06
CNTNAP3B-215ENST00000619138 UBXN1Q04323 297 aa15.44■□□□□ 0.06
CNTNAP3B-215ENST00000619138 MAP9Q49MG5 647 aa15.44■□□□□ 0.06
CNTNAP3B-215ENST00000619138 FCHSD1Q86WN1 690 aa15.44■□□□□ 0.06
CNTNAP3B-215ENST00000619138 CHP1Q99653 195 aa15.44■□□□□ 0.06
CNTNAP3B-215ENST00000619138 JPH2Q9BR39 696 aaPredicted RBP15.44■□□□□ 0.06
CNTNAP3B-215ENST00000619138 CDKL5O76039 1030 aa15.44■□□□□ 0.06
CNTNAP3B-215ENST00000619138 GUCY1A2P33402 732 aa15.44■□□□□ 0.06
CNTNAP3B-215ENST00000619138 ERFEQ4G0M1 354 aa15.44■□□□□ 0.06
CNTNAP3B-215ENST00000619138 AIDAQ96BJ3 306 aa15.44■□□□□ 0.06
CNTNAP3B-215ENST00000619138 MKRN1Q9UHC7 482 aaKnown RBP15.44■□□□□ 0.06
CNTNAP3B-215ENST00000619138 IQSEC3Q9UPP2 1182 aaPredicted RBP15.44■□□□□ 0.06
CNTNAP3B-215ENST00000619138 HPS5Q9UPZ3 1129 aa15.44■□□□□ 0.06
CNTNAP3B-215ENST00000619138 INPP5BP32019 993 aa15.44■□□□□ 0.06
CNTNAP3B-215ENST00000619138 KCNJ6P48051 423 aa15.44■□□□□ 0.06
CNTNAP3B-215ENST00000619138 C2orf54Q08AI8 447 aa15.44■□□□□ 0.06
CNTNAP3B-215ENST00000619138 TRIM28Q13263 835 aaKnown RBP15.44■□□□□ 0.06
CNTNAP3B-215ENST00000619138 TBC1D9BQ66K14 1250 aa15.44■□□□□ 0.06
CNTNAP3B-215ENST00000619138 CEP57Q86XR8 500 aa15.44■□□□□ 0.06
CNTNAP3B-215ENST00000619138 RAD21O60216 631 aa15.43■□□□□ 0.06
CNTNAP3B-215ENST00000619138 CXCR5P32302 372 aa15.43■□□□□ 0.06
CNTNAP3B-215ENST00000619138 ZNF174Q15697 407 aa15.43■□□□□ 0.06
CNTNAP3B-215ENST00000619138 TRIM22Q8IYM9 498 aa15.43■□□□□ 0.06
CNTNAP3B-215ENST00000619138 ZNF34Q8IZ26 560 aa15.43■□□□□ 0.06
CNTNAP3B-215ENST00000619138 TUBE1Q9UJT0 475 aa15.43■□□□□ 0.06
CNTNAP3B-215ENST00000619138 NDUFAB1O14561 156 aa15.43■□□□□ 0.06
CNTNAP3B-215ENST00000619138 MAP2K7O14733 419 aa15.43■□□□□ 0.06
CNTNAP3B-215ENST00000619138 PPFIA4O75335 1185 aa15.43■□□□□ 0.06
CNTNAP3B-215ENST00000619138 GUCY2CP25092 1073 aa15.43■□□□□ 0.06
CNTNAP3B-215ENST00000619138 MAP2K2P36507 400 aa15.43■□□□□ 0.06
CNTNAP3B-215ENST00000619138 PPARAQ07869 468 aa15.43■□□□□ 0.06
CNTNAP3B-215ENST00000619138 SCARF1Q14162 830 aa15.43■□□□□ 0.06
CNTNAP3B-215ENST00000619138 PARP10Q53GL7 1025 aa15.43■□□□□ 0.06
CNTNAP3B-215ENST00000619138 ATG9AQ7Z3C6 839 aa15.43■□□□□ 0.06
CNTNAP3B-215ENST00000619138 ARHGEF1Q92888 912 aaKnown RBP15.43■□□□□ 0.06
CNTNAP3B-215ENST00000619138 KCND1Q9NSA2 647 aa15.43■□□□□ 0.06
CNTNAP3B-215ENST00000619138 ANGEL1Q9UNK9 670 aaKnown RBP15.43■□□□□ 0.06
CNTNAP3B-215ENST00000619138 FAM205CA6NFA0 338 aa15.43■□□□□ 0.06
CNTNAP3B-215ENST00000619138 CCDC152Q4G0S7 254 aa15.43■□□□□ 0.06
CNTNAP3B-215ENST00000619138 CSRNP2Q9H175 543 aa15.43■□□□□ 0.06
CNTNAP3B-215ENST00000619138 KAT14Q9H8E8 782 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms