RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 ZNF408Q9H9D4 720 aa15.62■□□□□ 0.09
CIITA-213ENST00000618327 DCP1AQ9NPI6 582 aaPredicted RBP15.62■□□□□ 0.09
CIITA-213ENST00000618327 PRDM10Q9NQV6 1147 aa15.62■□□□□ 0.09
CIITA-213ENST00000618327 GSG1L2A8MUP6 293 aa15.62■□□□□ 0.09
CIITA-213ENST00000618327 NR1I2O75469 434 aa15.62■□□□□ 0.09
CIITA-213ENST00000618327 POSTNQ15063 836 aa15.62■□□□□ 0.09
CIITA-213ENST00000618327 NSMFQ6X4W1 530 aa15.62■□□□□ 0.09
CIITA-213ENST00000618327 KANSL2Q9H9L4 492 aa15.62■□□□□ 0.09
CIITA-213ENST00000618327 CLIC4Q9Y696 253 aa15.62■□□□□ 0.09
CIITA-213ENST00000618327 SHPRHQ149N8 1683 aa15.62■□□□□ 0.09
CIITA-213ENST00000618327 CHMP2AO43633 222 aa15.62■□□□□ 0.09
CIITA-213ENST00000618327 POTEJP0CG39 1038 aa15.62■□□□□ 0.09
CIITA-213ENST00000618327 SP4Q02446 784 aa15.62■□□□□ 0.09
CIITA-213ENST00000618327 TMCO3Q6UWJ1 677 aa15.62■□□□□ 0.09
CIITA-213ENST00000618327 GPT2Q8TD30 523 aa15.62■□□□□ 0.09
CIITA-213ENST00000618327 CNKSR2Q8WXI2 1034 aa15.62■□□□□ 0.09
CIITA-213ENST00000618327 CCDC102AQ96A19 550 aa15.62■□□□□ 0.09
CIITA-213ENST00000618327 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.62■□□□□ 0.09
CIITA-213ENST00000618327 FOXP1Q9H334 677 aaPredicted RBP15.62■□□□□ 0.09
CIITA-213ENST00000618327 FMN2Q9NZ56 1722 aa15.62■□□□□ 0.09
CIITA-213ENST00000618327 ANKRD26Q9UPS8 1709 aa15.62■□□□□ 0.09
CIITA-213ENST00000618327 NEDD4P46934 1319 aa15.62■□□□□ 0.09
CIITA-213ENST00000618327 MYCNP04198 464 aaPredicted RBP15.62■□□□□ 0.09
CIITA-213ENST00000618327 CYP2D6P10635 497 aa15.62■□□□□ 0.09
CIITA-213ENST00000618327 PDE4DQ08499 809 aa15.62■□□□□ 0.09
CIITA-213ENST00000618327 DPY19L2Q6NUT2 758 aa15.62■□□□□ 0.09
CIITA-213ENST00000618327 TAF4BQ92750 862 aa15.62■□□□□ 0.09
CIITA-213ENST00000618327 INCENPQ9NQS7 918 aa15.62■□□□□ 0.09
CIITA-213ENST00000618327 HOMER2Q9NSB8 354 aa15.62■□□□□ 0.09
CIITA-213ENST00000618327 RTEL1Q9NZ71 1219 aa15.62■□□□□ 0.09
CIITA-213ENST00000618327 TMEM232C9JQI7 657 aa15.61■□□□□ 0.09
CIITA-213ENST00000618327 CMA1P23946 247 aa15.61■□□□□ 0.09
CIITA-213ENST00000618327 KIF4BQ2VIQ3 1234 aa15.61■□□□□ 0.09
CIITA-213ENST00000618327 TTC12Q9H892 705 aaPredicted RBP15.61■□□□□ 0.09
CIITA-213ENST00000618327 AS3MTQ9HBK9 375 aa15.61■□□□□ 0.09
CIITA-213ENST00000618327 TSGA10IPQ3SY00 556 aa15.61■□□□□ 0.09
CIITA-213ENST00000618327 HS2ST1Q7LGA3 356 aa15.61■□□□□ 0.09
CIITA-213ENST00000618327 MLKLQ8NB16 471 aa15.61■□□□□ 0.09
CIITA-213ENST00000618327 KIF2CQ99661 725 aa15.61■□□□□ 0.09
CIITA-213ENST00000618327 MON2Q7Z3U7 1717 aa15.61■□□□□ 0.09
CIITA-213ENST00000618327 BACH1O14867 736 aa15.61■□□□□ 0.09
CIITA-213ENST00000618327 URI1O94763 535 aaPredicted RBP15.61■□□□□ 0.09
CIITA-213ENST00000618327 GPR162Q16538 588 aa15.61■□□□□ 0.09
CIITA-213ENST00000618327 MB21D2Q8IYB1 491 aaPredicted RBP15.61■□□□□ 0.09
CIITA-213ENST00000618327 CBX8Q9HC52 389 aa15.61■□□□□ 0.09
CIITA-213ENST00000618327 GOLGA6L9A6NEM1 432 aa15.61■□□□□ 0.09
CIITA-213ENST00000618327 ZBTB7AO95365 584 aa15.61■□□□□ 0.09
CIITA-213ENST00000618327 PPP1R2P41236 205 aa15.61■□□□□ 0.09
CIITA-213ENST00000618327 KIF23Q02241 960 aaPredicted RBP15.61■□□□□ 0.09
CIITA-213ENST00000618327 CABP7Q86V35 215 aa15.61■□□□□ 0.09
CIITA-213ENST00000618327 FBXO11Q86XK2 927 aa15.61■□□□□ 0.09
CIITA-213ENST00000618327 DGKHQ86XP1 1220 aa15.61■□□□□ 0.09
CIITA-213ENST00000618327 ZNF609O15014 1411 aa15.61■□□□□ 0.09
CIITA-213ENST00000618327 MROH7-TTC4A0A0A0MT08 1334 aa15.6■□□□□ 0.09
CIITA-213ENST00000618327 CHGBP05060 677 aa15.6■□□□□ 0.09
CIITA-213ENST00000618327 NEFHP12036 1026 aa15.6■□□□□ 0.09
CIITA-213ENST00000618327 IBSPP21815 317 aaPredicted RBP15.6■□□□□ 0.09
CIITA-213ENST00000618327 NLRP12P59046 1061 aa15.6■□□□□ 0.09
CIITA-213ENST00000618327 CIAPIN1Q6FI81 312 aa15.6■□□□□ 0.09
CIITA-213ENST00000618327 NCAPH2Q6IBW4 605 aa15.6■□□□□ 0.09
CIITA-213ENST00000618327 NEK8Q86SG6 692 aa15.6■□□□□ 0.09
CIITA-213ENST00000618327 PNPLA7Q6ZV29 1317 aa15.6■□□□□ 0.09
CIITA-213ENST00000618327 ECE2O60344 883 aa15.6■□□□□ 0.09
CIITA-213ENST00000618327 CRKP46108 304 aa15.6■□□□□ 0.09
CIITA-213ENST00000618327 IQCEQ6IPM2 695 aa15.6■□□□□ 0.09
CIITA-213ENST00000618327 CYB5R4Q7L1T6 521 aa15.6■□□□□ 0.09
CIITA-213ENST00000618327 MMRN2Q9H8L6 949 aa15.6■□□□□ 0.09
CIITA-213ENST00000618327 SERTAD1Q9UHV2 236 aa15.6■□□□□ 0.09
CIITA-213ENST00000618327 NRXN3Q9Y4C0 1643 aa15.6■□□□□ 0.09
CIITA-213ENST00000618327 GDF11O95390 407 aa15.6■□□□□ 0.09
CIITA-213ENST00000618327 MYCLP12524 364 aaPredicted RBP15.6■□□□□ 0.09
CIITA-213ENST00000618327 CASQ1P31415 396 aa15.6■□□□□ 0.09
CIITA-213ENST00000618327 GRM1Q13255 1194 aa15.6■□□□□ 0.09
CIITA-213ENST00000618327 UIMC1Q96RL1 719 aa15.6■□□□□ 0.09
CIITA-213ENST00000618327 CSADQ9Y600 493 aa15.6■□□□□ 0.09
CIITA-213ENST00000618327 WDR19Q8NEZ3 1342 aa15.6■□□□□ 0.09
CIITA-213ENST00000618327 SLC39A14Q15043 492 aa15.59■□□□□ 0.09
CIITA-213ENST00000618327 TBC1D16Q8TBP0 767 aa15.59■□□□□ 0.09
CIITA-213ENST00000618327 SPAG5Q96R06 1193 aa15.59■□□□□ 0.09
CIITA-213ENST00000618327 TAOK3Q9H2K8 898 aa15.59■□□□□ 0.09
CIITA-213ENST00000618327 CENPHQ9H3R5 247 aa15.59■□□□□ 0.09
CIITA-213ENST00000618327 ZKSCAN5Q9Y2L8 839 aa15.59■□□□□ 0.09
CIITA-213ENST00000618327 PCDHA1Q9Y5I3 950 aa15.59■□□□□ 0.09
CIITA-213ENST00000618327 KRT13P13646 458 aa15.59■□□□□ 0.09
CIITA-213ENST00000618327 MCTP2Q6DN12 878 aa15.59■□□□□ 0.09
CIITA-213ENST00000618327 CNNM4Q6P4Q7 775 aa15.59■□□□□ 0.09
CIITA-213ENST00000618327 STAMQ92783 540 aa15.59■□□□□ 0.09
CIITA-213ENST00000618327 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.59■□□□□ 0.09
CIITA-213ENST00000618327 SNW1Q13573 536 aaKnown RBP15.59■□□□□ 0.09
CIITA-213ENST00000618327 AOC3Q16853 763 aa15.59■□□□□ 0.09
CIITA-213ENST00000618327 FOXP4Q8IVH2 680 aaPredicted RBP15.59■□□□□ 0.09
CIITA-213ENST00000618327 POLR3EQ9NVU0 708 aa15.59■□□□□ 0.09
CIITA-213ENST00000618327 MAPK8IP1Q9UQF2 711 aa15.59■□□□□ 0.09
CIITA-213ENST00000618327 PRPF3O43395 683 aaKnown RBP15.59■□□□□ 0.09
CIITA-213ENST00000618327 AKR1B10O60218 316 aa15.59■□□□□ 0.09
CIITA-213ENST00000618327 GRIPAP1Q4V328 841 aa15.59■□□□□ 0.09
CIITA-213ENST00000618327 USP37Q86T82 979 aa15.59■□□□□ 0.09
CIITA-213ENST00000618327 NSUN4Q96CB9 384 aaKnown RBP15.59■□□□□ 0.09
CIITA-213ENST00000618327 CLIC6Q96NY7 704 aa15.59■□□□□ 0.09
CIITA-213ENST00000618327 KIAA1468Q9P260 1216 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms