RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 SUN2Q9UH99 717 aa13.83□□□□□ -0.2
SRRT-216ENST00000618262 PUF60Q9UHX1 559 aaKnown RBP13.83□□□□□ -0.2
SRRT-216ENST00000618262 IPO5O00410 1097 aaKnown RBP13.83□□□□□ -0.2
SRRT-216ENST00000618262 CYP2C19P33261 490 aa13.83□□□□□ -0.2
SRRT-216ENST00000618262 SHROOM1Q2M3G4 852 aaPredicted RBP13.83□□□□□ -0.2
SRRT-216ENST00000618262 SKOR2Q2VWA4 1001 aaPredicted RBP13.83□□□□□ -0.2
SRRT-216ENST00000618262 DPY19L2Q6NUT2 758 aa13.83□□□□□ -0.2
SRRT-216ENST00000618262 PDLIM2Q96JY6 352 aa13.83□□□□□ -0.2
SRRT-216ENST00000618262 GMLQ99445 158 aa13.83□□□□□ -0.2
SRRT-216ENST00000618262 CLEC11AQ9Y240 323 aa13.83□□□□□ -0.2
SRRT-216ENST00000618262 HIRAP54198 1017 aaPredicted RBP13.82□□□□□ -0.2
SRRT-216ENST00000618262 GSTO1P78417 241 aa13.82□□□□□ -0.2
SRRT-216ENST00000618262 TSGA10IPQ3SY00 556 aa13.82□□□□□ -0.2
SRRT-216ENST00000618262 FOXD4L1Q9NU39 408 aa13.82□□□□□ -0.2
SRRT-216ENST00000618262 CTNNA3Q9UI47 895 aa13.82□□□□□ -0.2
SRRT-216ENST00000618262 HDAC9Q9UKV0 1011 aa13.82□□□□□ -0.2
SRRT-216ENST00000618262 SALL1Q9NSC2 1324 aa13.82□□□□□ -0.2
SRRT-216ENST00000618262 POLR3DP05423 398 aaPredicted RBP13.82□□□□□ -0.2
SRRT-216ENST00000618262 CCDC15Q0P6D6 951 aa13.82□□□□□ -0.2
SRRT-216ENST00000618262 ANGEL2Q5VTE6 544 aaKnown RBP13.82□□□□□ -0.2
SRRT-216ENST00000618262 CREB3L3Q68CJ9 461 aa13.82□□□□□ -0.2
SRRT-216ENST00000618262 RRAGCQ9HB90 399 aa13.82□□□□□ -0.2
SRRT-216ENST00000618262 DCP1AQ9NPI6 582 aaPredicted RBP13.82□□□□□ -0.2
SRRT-216ENST00000618262 LTBP3Q9NS15 1303 aa13.82□□□□□ -0.2
SRRT-216ENST00000618262 H7C1D1 291 aa13.81□□□□□ -0.2
SRRT-216ENST00000618262 LDHCP07864 332 aa13.81□□□□□ -0.2
SRRT-216ENST00000618262 NAT2P11245 290 aa13.81□□□□□ -0.2
SRRT-216ENST00000618262 PSMD2Q13200 908 aa13.81□□□□□ -0.2
SRRT-216ENST00000618262 KIF4BQ2VIQ3 1234 aa13.81□□□□□ -0.2
SRRT-216ENST00000618262 CRNKL1Q9BZJ0 848 aaKnown RBP13.81□□□□□ -0.2
SRRT-216ENST00000618262 NMRK2Q9NPI5 230 aa13.81□□□□□ -0.2
SRRT-216ENST00000618262 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.81□□□□□ -0.2
SRRT-216ENST00000618262 GPR75-ASB3A0A0A6YYF3 556 aa13.81□□□□□ -0.2
SRRT-216ENST00000618262 RBM47A0AV96 593 aaKnown RBP13.81□□□□□ -0.2
SRRT-216ENST00000618262 SPDYE2BA6NHP3 402 aa13.81□□□□□ -0.2
SRRT-216ENST00000618262 SLC27A2O14975 620 aa13.81□□□□□ -0.2
SRRT-216ENST00000618262 WDHD1O75717 1129 aaPredicted RBP13.81□□□□□ -0.2
SRRT-216ENST00000618262 SPDYE6P0CI01 402 aa13.81□□□□□ -0.2
SRRT-216ENST00000618262 MAGEA8P43361 318 aa13.81□□□□□ -0.2
SRRT-216ENST00000618262 BMS1Q14692 1282 aaKnown RBP13.81□□□□□ -0.2
SRRT-216ENST00000618262 MUM1L1Q5H9M0 696 aa13.81□□□□□ -0.2
SRRT-216ENST00000618262 GPC2Q8N158 579 aa13.81□□□□□ -0.2
SRRT-216ENST00000618262 CACTIN-AS1Q8N1I8 211 aa13.81□□□□□ -0.2
SRRT-216ENST00000618262 MAP4K1Q92918 833 aa13.81□□□□□ -0.2
SRRT-216ENST00000618262 JAKMIP1Q96N16 626 aaKnown RBP13.81□□□□□ -0.2
SRRT-216ENST00000618262 GPHNQ9NQX3 736 aaPredicted RBP13.81□□□□□ -0.2
SRRT-216ENST00000618262 GPRC5DQ9NZD1 345 aa13.81□□□□□ -0.2
SRRT-216ENST00000618262 ZNF213O14771 459 aa13.8□□□□□ -0.2
SRRT-216ENST00000618262 STK10O94804 968 aaKnown RBP13.8□□□□□ -0.2
SRRT-216ENST00000618262 CDC37Q16543 378 aaPredicted RBP13.8□□□□□ -0.2
SRRT-216ENST00000618262 AP1ARQ63HQ0 302 aa13.8□□□□□ -0.2
SRRT-216ENST00000618262 CHMP5Q9NZZ3 219 aa13.8□□□□□ -0.2
SRRT-216ENST00000618262 TACC3Q9Y6A5 838 aa13.8□□□□□ -0.2
SRRT-216ENST00000618262 DDTLA6NHG4 134 aaPredicted RBP13.8□□□□□ -0.2
SRRT-216ENST00000618262 FAM200BP0CF97 657 aa13.8□□□□□ -0.2
SRRT-216ENST00000618262 LMOD1P29536 600 aaPredicted RBP13.8□□□□□ -0.2
SRRT-216ENST00000618262 FAM47AQ5JRC9 791 aa13.8□□□□□ -0.2
SRRT-216ENST00000618262 STOX1Q6ZVD7 989 aa13.8□□□□□ -0.2
SRRT-216ENST00000618262 TBC1D10CQ8IV04 446 aa13.8□□□□□ -0.2
SRRT-216ENST00000618262 ZNF408Q9H9D4 720 aa13.8□□□□□ -0.2
SRRT-216ENST00000618262 GGA3Q9NZ52 723 aa13.8□□□□□ -0.2
SRRT-216ENST00000618262 CPSF2Q9P2I0 782 aaKnown RBP13.8□□□□□ -0.2
SRRT-216ENST00000618262 FLT1P17948 1338 aa13.8□□□□□ -0.2
SRRT-216ENST00000618262 CASTP20810 708 aaKnown RBP13.8□□□□□ -0.2
SRRT-216ENST00000618262 TTC31Q49AM3 519 aaPredicted RBP13.8□□□□□ -0.2
SRRT-216ENST00000618262 TTC30AQ86WT1 665 aa13.8□□□□□ -0.2
SRRT-216ENST00000618262 CLEC10AQ8IUN9 316 aa13.8□□□□□ -0.2
SRRT-216ENST00000618262 KIF2CQ99661 725 aa13.8□□□□□ -0.2
SRRT-216ENST00000618262 LZTS2Q9BRK4 669 aa13.8□□□□□ -0.2
SRRT-216ENST00000618262 HACL1Q9UJ83 578 aa13.8□□□□□ -0.2
SRRT-216ENST00000618262 SNX14Q9Y5W7 946 aa13.8□□□□□ -0.2
SRRT-216ENST00000618262 MYH2Q9UKX2 1941 aa13.8□□□□□ -0.2
SRRT-216ENST00000618262 CD2BP2O95400 341 aaKnown RBP13.79□□□□□ -0.2
SRRT-216ENST00000618262 ZDHHC15Q96MV8 337 aa13.79□□□□□ -0.2
SRRT-216ENST00000618262 B4E1Z4 1266 aa13.79□□□□□ -0.2
SRRT-216ENST00000618262 TRIM66O15016 1216 aa13.79□□□□□ -0.2
SRRT-216ENST00000618262 IRX1P78414 480 aaPredicted RBP13.79□□□□□ -0.2
SRRT-216ENST00000618262 E2F5Q15329 346 aa13.79□□□□□ -0.2
SRRT-216ENST00000618262 TTC30BQ8N4P2 665 aa13.79□□□□□ -0.2
SRRT-216ENST00000618262 AGBL3Q8NEM8 1001 aa13.79□□□□□ -0.2
SRRT-216ENST00000618262 TBC1D32Q96NH3 1257 aa13.79□□□□□ -0.2
SRRT-216ENST00000618262 NACAP1Q9BZK3 213 aa13.79□□□□□ -0.2
SRRT-216ENST00000618262 ZNF70Q9UC06 446 aaPredicted RBP13.79□□□□□ -0.2
SRRT-216ENST00000618262 SERPINA10Q9UK55 444 aa13.79□□□□□ -0.2
SRRT-216ENST00000618262 NMT2O60551 498 aa13.78□□□□□ -0.2
SRRT-216ENST00000618262 NEK4P51957 841 aa13.78□□□□□ -0.2
SRRT-216ENST00000618262 IFT88Q13099 833 aa13.78□□□□□ -0.2
SRRT-216ENST00000618262 NECTIN1Q15223 517 aa13.78□□□□□ -0.2
SRRT-216ENST00000618262 CCDC84Q86UT8 332 aaPredicted RBP13.78□□□□□ -0.2
SRRT-216ENST00000618262 SLF2Q8IX21 1173 aa13.78□□□□□ -0.2
SRRT-216ENST00000618262 CCDC82Q8N4S0 544 aa13.78□□□□□ -0.2
SRRT-216ENST00000618262 THOC1Q96FV9 657 aaKnown RBP13.78□□□□□ -0.2
SRRT-216ENST00000618262 FAM198AQ9UFP1 575 aa13.78□□□□□ -0.2
SRRT-216ENST00000618262 ARFGEF1Q9Y6D6 1849 aa13.78□□□□□ -0.2
SRRT-216ENST00000618262 ADM5C9JUS6 153 aa13.78□□□□□ -0.2
SRRT-216ENST00000618262 RANBP6O60518 1105 aaKnown RBP13.78□□□□□ -0.2
SRRT-216ENST00000618262 E2F4Q16254 413 aa13.78□□□□□ -0.2
SRRT-216ENST00000618262 MAP1SQ66K74 1059 aaPredicted RBP13.78□□□□□ -0.2
SRRT-216ENST00000618262 NFXL1Q6ZNB6 911 aa13.78□□□□□ -0.2
SRRT-216ENST00000618262 PDS5AQ29RF7 1337 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms