RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 HAUS3Q68CZ6 603 aa11.36□□□□□ -0.59
CUL4A-212ENST00000617546 ARHGEF25Q86VW2 580 aa11.36□□□□□ -0.59
CUL4A-212ENST00000617546 FBXO3Q9UK99 471 aa11.36□□□□□ -0.59
CUL4A-212ENST00000617546 ANXA1P04083 346 aa11.36□□□□□ -0.59
CUL4A-212ENST00000617546 MAP7D1Q3KQU3 841 aa11.36□□□□□ -0.59
CUL4A-212ENST00000617546 FBXO41Q8TF61 875 aa11.36□□□□□ -0.59
CUL4A-212ENST00000617546 YY1AP1Q9H869 796 aa11.36□□□□□ -0.59
CUL4A-212ENST00000617546 ZSCAN20P17040 1043 aaPredicted RBP11.36□□□□□ -0.59
CUL4A-212ENST00000617546 C10orf76Q5T2E6 689 aa11.36□□□□□ -0.59
CUL4A-212ENST00000617546 VTI1AQ96AJ9 217 aa11.36□□□□□ -0.59
CUL4A-212ENST00000617546 GAS8O95995 478 aa11.35□□□□□ -0.59
CUL4A-212ENST00000617546 HAUS7Q99871 368 aa11.35□□□□□ -0.59
CUL4A-212ENST00000617546 NCAPGQ9BPX3 1015 aa11.35□□□□□ -0.59
CUL4A-212ENST00000617546 NCOA3Q9Y6Q9 1424 aa11.35□□□□□ -0.59
CUL4A-212ENST00000617546 GPAA1O43292 621 aa11.35□□□□□ -0.59
CUL4A-212ENST00000617546 SPOPO43791 374 aa11.35□□□□□ -0.59
CUL4A-212ENST00000617546 ZNF131P52739 623 aa11.35□□□□□ -0.59
CUL4A-212ENST00000617546 ZSCAN29Q8IWY8 852 aaPredicted RBP11.35□□□□□ -0.59
CUL4A-212ENST00000617546 STAG1Q8WVM7 1258 aa11.35□□□□□ -0.59
CUL4A-212ENST00000617546 FOXP1Q9H334 677 aaPredicted RBP11.35□□□□□ -0.59
CUL4A-212ENST00000617546 ANO9A1A5B4 782 aa11.35□□□□□ -0.59
CUL4A-212ENST00000617546 MAN1A1P33908 653 aa11.35□□□□□ -0.59
CUL4A-212ENST00000617546 TRAPPC10P48553 1259 aa11.35□□□□□ -0.59
CUL4A-212ENST00000617546 NBPF6Q5VWK0 638 aa11.35□□□□□ -0.59
CUL4A-212ENST00000617546 TRMT44Q8IYL2 757 aaKnown RBP11.35□□□□□ -0.59
CUL4A-212ENST00000617546 LINC00301Q8NCQ3 95 aa11.35□□□□□ -0.59
CUL4A-212ENST00000617546 RGS22Q8NE09 1264 aa11.35□□□□□ -0.59
CUL4A-212ENST00000617546 SIRT1Q96EB6 747 aa11.35□□□□□ -0.59
CUL4A-212ENST00000617546 NBPF4Q96M43 638 aa11.35□□□□□ -0.59
CUL4A-212ENST00000617546 GPR108Q9NPR9 543 aa11.35□□□□□ -0.59
CUL4A-212ENST00000617546 I3L4J1 428 aa11.35□□□□□ -0.59
CUL4A-212ENST00000617546 LMNAP02545 664 aaKnown RBP11.35□□□□□ -0.59
CUL4A-212ENST00000617546 ZC3H6P61129 1189 aaKnown RBP11.35□□□□□ -0.59
CUL4A-212ENST00000617546 ANKRD20A3Q5VUR7 823 aa11.35□□□□□ -0.59
CUL4A-212ENST00000617546 CEP120Q8N960 986 aa11.35□□□□□ -0.59
CUL4A-212ENST00000617546 USP44Q9H0E7 712 aa11.35□□□□□ -0.59
CUL4A-212ENST00000617546 ABCB6Q9NP58 842 aa11.35□□□□□ -0.59
CUL4A-212ENST00000617546 B4E1Z4 1266 aa11.35□□□□□ -0.59
CUL4A-212ENST00000617546 LONP1P36776 959 aaKnown RBP11.35□□□□□ -0.59
CUL4A-212ENST00000617546 IFT88Q13099 833 aa11.35□□□□□ -0.59
CUL4A-212ENST00000617546 CFAP157Q5JU67 520 aa11.35□□□□□ -0.59
CUL4A-212ENST00000617546 SRLQ86TD4 932 aa11.35□□□□□ -0.59
CUL4A-212ENST00000617546 DBNDD2Q9BQY9 259 aa11.35□□□□□ -0.59
CUL4A-212ENST00000617546 ZKSCAN3Q9BRR0 538 aa11.35□□□□□ -0.59
CUL4A-212ENST00000617546 TXLNGQ9NUQ3 528 aa11.35□□□□□ -0.59
CUL4A-212ENST00000617546 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.35□□□□□ -0.59
CUL4A-212ENST00000617546 HSPA6P17066 643 aa11.34□□□□□ -0.59
CUL4A-212ENST00000617546 PDIA3P30101 505 aaKnown RBP11.34□□□□□ -0.59
CUL4A-212ENST00000617546 LIN9Q5TKA1 542 aa11.34□□□□□ -0.59
CUL4A-212ENST00000617546 NBPF10Q6P3W6 841 aaKnown RBP11.34□□□□□ -0.59
CUL4A-212ENST00000617546 N4BP2L2Q92802 583 aaPredicted RBP11.34□□□□□ -0.59
CUL4A-212ENST00000617546 DHTKD1Q96HY7 919 aaPredicted RBP11.34□□□□□ -0.59
CUL4A-212ENST00000617546 PBKQ96KB5 322 aa11.34□□□□□ -0.59
CUL4A-212ENST00000617546 RABGAP1Q9Y3P9 1069 aa11.34□□□□□ -0.59
CUL4A-212ENST00000617546 CARMIL3Q8ND23 1372 aa11.34□□□□□ -0.59
CUL4A-212ENST00000617546 TARSL2A2RTX5 802 aaKnown RBP11.34□□□□□ -0.59
CUL4A-212ENST00000617546 SCRN1Q12765 414 aa11.34□□□□□ -0.59
CUL4A-212ENST00000617546 SEMA3FQ13275 785 aa11.34□□□□□ -0.59
CUL4A-212ENST00000617546 CUL1Q13616 776 aa11.34□□□□□ -0.59
CUL4A-212ENST00000617546 C2CD5Q86YS7 1000 aa11.34□□□□□ -0.59
CUL4A-212ENST00000617546 MAGEB6Q8N7X4 407 aa11.34□□□□□ -0.59
CUL4A-212ENST00000617546 NSUN7Q8NE18 718 aaKnown RBP11.34□□□□□ -0.59
CUL4A-212ENST00000617546 MAGI3Q5TCQ9 1506 aa11.34□□□□□ -0.59
CUL4A-212ENST00000617546 TMEM110-MUSTN1A8MSY1 372 aa11.34□□□□□ -0.59
CUL4A-212ENST00000617546 PCP11498 1178 aaKnown RBP11.34□□□□□ -0.59
CUL4A-212ENST00000617546 PDE6BP35913 854 aa11.34□□□□□ -0.59
CUL4A-212ENST00000617546 ATP1A2P50993 1020 aa11.34□□□□□ -0.59
CUL4A-212ENST00000617546 DPCR1Q3MIW9 517 aa11.34□□□□□ -0.59
CUL4A-212ENST00000617546 TYW1BQ6NUM6 668 aa11.34□□□□□ -0.59
CUL4A-212ENST00000617546 IMPG2Q9BZV3 1241 aa11.34□□□□□ -0.59
CUL4A-212ENST00000617546 NOP53Q9NZM5 478 aaKnown RBP11.34□□□□□ -0.59
CUL4A-212ENST00000617546 DISP1Q96F81 1524 aa11.34□□□□□ -0.59
CUL4A-212ENST00000617546 LAD1O00515 517 aa11.34□□□□□ -0.59
CUL4A-212ENST00000617546 KRIT1O00522 736 aa11.34□□□□□ -0.59
CUL4A-212ENST00000617546 RASEFQ8IZ41 740 aa11.34□□□□□ -0.59
CUL4A-212ENST00000617546 NSFL1CQ9UNZ2 370 aaKnown RBP11.34□□□□□ -0.59
CUL4A-212ENST00000617546 SMIM24O75264 130 aa11.33□□□□□ -0.59
CUL4A-212ENST00000617546 RRAGAQ7L523 313 aa11.33□□□□□ -0.59
CUL4A-212ENST00000617546 IP6K1Q92551 441 aa11.33□□□□□ -0.59
CUL4A-212ENST00000617546 STX8Q9UNK0 236 aa11.33□□□□□ -0.59
CUL4A-212ENST00000617546 YEATS2Q9ULM3 1422 aa11.33□□□□□ -0.6
CUL4A-212ENST00000617546 RFX7Q2KHR2 1363 aa11.33□□□□□ -0.6
CUL4A-212ENST00000617546 GUCY2CP25092 1073 aa11.33□□□□□ -0.6
CUL4A-212ENST00000617546 HOXC9P31274 260 aa11.33□□□□□ -0.6
CUL4A-212ENST00000617546 BIRC3Q13489 604 aa11.33□□□□□ -0.6
CUL4A-212ENST00000617546 DCAF5Q96JK2 942 aa11.33□□□□□ -0.6
CUL4A-212ENST00000617546 JPH2Q9BR39 696 aaPredicted RBP11.33□□□□□ -0.6
CUL4A-212ENST00000617546 RWDD2AQ9UIY3 292 aa11.33□□□□□ -0.6
CUL4A-212ENST00000617546 ATP7BP35670 1465 aa11.33□□□□□ -0.6
CUL4A-212ENST00000617546 SAMD9LQ8IVG5 1584 aa11.33□□□□□ -0.6
CUL4A-212ENST00000617546 KDM3AQ9Y4C1 1321 aa11.33□□□□□ -0.6
CUL4A-212ENST00000617546 TAF5LO75529 589 aa11.33□□□□□ -0.6
CUL4A-212ENST00000617546 BCRP11274 1271 aa11.33□□□□□ -0.6
CUL4A-212ENST00000617546 EEF2P13639 858 aaKnown RBP11.33□□□□□ -0.6
CUL4A-212ENST00000617546 CASP14P31944 242 aa11.33□□□□□ -0.6
CUL4A-212ENST00000617546 INF2Q27J81 1249 aa11.33□□□□□ -0.6
CUL4A-212ENST00000617546 PIK3AP1Q6ZUJ8 805 aa11.33□□□□□ -0.6
CUL4A-212ENST00000617546 SUCLG2Q96I99 432 aa11.33□□□□□ -0.6
CUL4A-212ENST00000617546 NT5C3AQ9H0P0 336 aa11.33□□□□□ -0.6
CUL4A-212ENST00000617546 ATP5HO75947 161 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms