RNA–Protein interactions for RNA: ENST00000616545.4

TARDBP-217, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-217ENST00000616545 GOPCQ9HD26 462 aa13.6□□□□□ -0.23
TARDBP-217ENST00000616545 GPHNQ9NQX3 736 aaPredicted RBP13.6□□□□□ -0.23
TARDBP-217ENST00000616545 UTRNP46939 3433 aa13.59□□□□□ -0.23
TARDBP-217ENST00000616545 GOLGA8AA7E2F4 631 aa13.59□□□□□ -0.23
TARDBP-217ENST00000616545 CPLX1O14810 134 aa13.59□□□□□ -0.23
TARDBP-217ENST00000616545 SNHG28P0DPA3 235 aa13.59□□□□□ -0.23
TARDBP-217ENST00000616545 JAG1P78504 1218 aa13.59□□□□□ -0.23
TARDBP-217ENST00000616545 PPATQ06203 517 aa13.59□□□□□ -0.23
TARDBP-217ENST00000616545 VGLL4Q14135 290 aa13.59□□□□□ -0.23
TARDBP-217ENST00000616545 RTN1Q16799 776 aa13.59□□□□□ -0.23
TARDBP-217ENST00000616545 ASPRV1Q53RT3 343 aa13.59□□□□□ -0.23
TARDBP-217ENST00000616545 GPATCH4Q5T3I0 446 aaKnown RBP13.59□□□□□ -0.23
TARDBP-217ENST00000616545 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.59□□□□□ -0.23
TARDBP-217ENST00000616545 NOL8Q76FK4 1167 aaKnown RBP13.59□□□□□ -0.23
TARDBP-217ENST00000616545 MICU3Q86XE3 530 aa13.59□□□□□ -0.23
TARDBP-217ENST00000616545 ERO1BQ86YB8 467 aa13.59□□□□□ -0.23
TARDBP-217ENST00000616545 SIAH1Q8IUQ4 282 aa13.59□□□□□ -0.23
TARDBP-217ENST00000616545 ZNF280CQ8ND82 737 aa13.59□□□□□ -0.23
TARDBP-217ENST00000616545 DCAF4Q8WV16 495 aa13.59□□□□□ -0.23
TARDBP-217ENST00000616545 LPAR1Q92633 364 aa13.59□□□□□ -0.23
TARDBP-217ENST00000616545 GMCL1Q96IK5 515 aa13.59□□□□□ -0.23
TARDBP-217ENST00000616545 SENP2Q9HC62 589 aa13.59□□□□□ -0.23
TARDBP-217ENST00000616545 NAP1L2Q9ULW6 460 aaPredicted RBP13.59□□□□□ -0.23
TARDBP-217ENST00000616545 HPS5Q9UPZ3 1129 aa13.59□□□□□ -0.23
TARDBP-217ENST00000616545 PAPPA2Q9BXP8 1791 aa13.58□□□□□ -0.23
TARDBP-217ENST00000616545 USP17L10C9JJH3 530 aa13.58□□□□□ -0.24
TARDBP-217ENST00000616545 TRAF5O00463 557 aa13.58□□□□□ -0.24
TARDBP-217ENST00000616545 CELF2O95319 508 aaKnown RBP13.58□□□□□ -0.24
TARDBP-217ENST00000616545 PARP1P09874 1014 aaKnown RBP13.58□□□□□ -0.24
TARDBP-217ENST00000616545 HMGN5P82970 282 aaKnown RBP13.58□□□□□ -0.24
TARDBP-217ENST00000616545 ATP2B2Q01814 1243 aa13.58□□□□□ -0.24
TARDBP-217ENST00000616545 GRM4Q14833 912 aa13.58□□□□□ -0.24
TARDBP-217ENST00000616545 NUP133Q8WUM0 1156 aa13.58□□□□□ -0.24
TARDBP-217ENST00000616545 ZKSCAN4Q969J2 545 aaPredicted RBP13.58□□□□□ -0.24
TARDBP-217ENST00000616545 CWC22Q9HCG8 908 aaKnown RBP13.58□□□□□ -0.24
TARDBP-217ENST00000616545 RBM27Q9P2N5 1060 aaKnown RBP13.58□□□□□ -0.24
TARDBP-217ENST00000616545 KIF3AQ9Y496 699 aa13.58□□□□□ -0.24
TARDBP-217ENST00000616545 DOCK1Q14185 1865 aa13.58□□□□□ -0.24
TARDBP-217ENST00000616545 PASKQ96RG2 1323 aa13.58□□□□□ -0.24
TARDBP-217ENST00000616545 SPDYE5A6NIY4 337 aa13.57□□□□□ -0.24
TARDBP-217ENST00000616545 F5H6K3 240 aa13.57□□□□□ -0.24
TARDBP-217ENST00000616545 PDHBP11177 359 aa13.57□□□□□ -0.24
TARDBP-217ENST00000616545 BACE1P56817 501 aa13.57□□□□□ -0.24
TARDBP-217ENST00000616545 KLRC3Q07444 240 aa13.57□□□□□ -0.24
TARDBP-217ENST00000616545 SCRN1Q12765 414 aa13.57□□□□□ -0.24
TARDBP-217ENST00000616545 PRKG1Q13976 671 aa13.57□□□□□ -0.24
TARDBP-217ENST00000616545 RGS22Q8NE09 1264 aa13.57□□□□□ -0.24
TARDBP-217ENST00000616545 FEZ1Q99689 392 aa13.57□□□□□ -0.24
TARDBP-217ENST00000616545 LARP6Q9BRS8 491 aaKnown RBP13.57□□□□□ -0.24
TARDBP-217ENST00000616545 VCPKMTQ9H867 229 aa13.57□□□□□ -0.24
TARDBP-217ENST00000616545 SNCAIPQ9Y6H5 919 aa13.57□□□□□ -0.24
TARDBP-217ENST00000616545 ZHX2Q9Y6X8 837 aa13.57□□□□□ -0.24
TARDBP-217ENST00000616545 PALM3A6NDB9 673 aaPredicted RBP13.56□□□□□ -0.24
TARDBP-217ENST00000616545 CXCL11O14625 94 aa13.56□□□□□ -0.24
TARDBP-217ENST00000616545 PLA2G6O60733 806 aa13.56□□□□□ -0.24
TARDBP-217ENST00000616545 LARGE1O95461 756 aa13.56□□□□□ -0.24
TARDBP-217ENST00000616545 IFNAR1P17181 557 aa13.56□□□□□ -0.24
TARDBP-217ENST00000616545 SLC1A4P43007 532 aa13.56□□□□□ -0.24
TARDBP-217ENST00000616545 STK3Q13188 491 aa13.56□□□□□ -0.24
TARDBP-217ENST00000616545 PPIL2Q13356 520 aa13.56□□□□□ -0.24
TARDBP-217ENST00000616545 SH3D19Q5HYK7 790 aa13.56□□□□□ -0.24
TARDBP-217ENST00000616545 SLFN13Q68D06 897 aa13.56□□□□□ -0.24
TARDBP-217ENST00000616545 USP17L2Q6R6M4 530 aa13.56□□□□□ -0.24
TARDBP-217ENST00000616545 DLK2Q6UY11 383 aa13.56□□□□□ -0.24
TARDBP-217ENST00000616545 CCDC83Q8IWF9 413 aa13.56□□□□□ -0.24
TARDBP-217ENST00000616545 LRRC47Q8N1G4 583 aaKnown RBP13.56□□□□□ -0.24
TARDBP-217ENST00000616545 ZNF784Q8NCA9 323 aaPredicted RBP13.56□□□□□ -0.24
TARDBP-217ENST00000616545 SLC10A4Q96EP9 437 aa13.56□□□□□ -0.24
TARDBP-217ENST00000616545 C12orf42Q96LP6 360 aa13.56□□□□□ -0.24
TARDBP-217ENST00000616545 ZNF408Q9H9D4 720 aa13.56□□□□□ -0.24
TARDBP-217ENST00000616545 AFG3L2Q9Y4W6 797 aa13.56□□□□□ -0.24
TARDBP-217ENST00000616545 A0A1W2PRG0 241 aa13.55□□□□□ -0.24
TARDBP-217ENST00000616545 UBE2Q2LH0YL09 131 aa13.55□□□□□ -0.24
TARDBP-217ENST00000616545 WDR46O15213 610 aaKnown RBP13.55□□□□□ -0.24
TARDBP-217ENST00000616545 NDUFB10O96000 172 aa13.55□□□□□ -0.24
TARDBP-217ENST00000616545 CCT2P78371 535 aaKnown RBP13.55□□□□□ -0.24
TARDBP-217ENST00000616545 ZNF543Q08ER8 600 aa13.55□□□□□ -0.24
TARDBP-217ENST00000616545 SPP2Q13103 211 aa13.55□□□□□ -0.24
TARDBP-217ENST00000616545 SHROOM1Q2M3G4 852 aaPredicted RBP13.55□□□□□ -0.24
TARDBP-217ENST00000616545 TMTC3Q6ZXV5 915 aa13.55□□□□□ -0.24
TARDBP-217ENST00000616545 CLEC10AQ8IUN9 316 aa13.55□□□□□ -0.24
TARDBP-217ENST00000616545 TRIM22Q8IYM9 498 aa13.55□□□□□ -0.24
TARDBP-217ENST00000616545 NECAB1Q8N987 351 aa13.55□□□□□ -0.24
TARDBP-217ENST00000616545 ACER1Q8TDN7 264 aa13.55□□□□□ -0.24
TARDBP-217ENST00000616545 WASF1Q92558 559 aa13.55□□□□□ -0.24
TARDBP-217ENST00000616545 MYL10Q9BUA6 226 aa13.55□□□□□ -0.24
TARDBP-217ENST00000616545 RNF26Q9BY78 433 aaPredicted RBP13.55□□□□□ -0.24
TARDBP-217ENST00000616545 FAM217BQ9NTX9 383 aaPredicted RBP13.55□□□□□ -0.24
TARDBP-217ENST00000616545 TMOD4Q9NZQ9 345 aa13.55□□□□□ -0.24
TARDBP-217ENST00000616545 MAD2L2Q9UI95 211 aa13.55□□□□□ -0.24
TARDBP-217ENST00000616545 SMC3Q9UQE7 1217 aa13.55□□□□□ -0.24
TARDBP-217ENST00000616545 ATAD5Q96QE3 1844 aa13.55□□□□□ -0.24
TARDBP-217ENST00000616545 KLRF2D3W0D1 207 aa13.54□□□□□ -0.24
TARDBP-217ENST00000616545 BMP3P12645 472 aa13.54□□□□□ -0.24
TARDBP-217ENST00000616545 PDCP20941 246 aa13.54□□□□□ -0.24
TARDBP-217ENST00000616545 CDC27P30260 824 aa13.54□□□□□ -0.24
TARDBP-217ENST00000616545 ECE1P42892 770 aa13.54□□□□□ -0.24
TARDBP-217ENST00000616545 AKAP17AQ02040 695 aaKnown RBP13.54□□□□□ -0.24
TARDBP-217ENST00000616545 NTRK3Q16288 839 aa13.54□□□□□ -0.24
TARDBP-217ENST00000616545 CST9Q5W186 159 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms