RNA–Protein interactions for RNA: ENST00000616369.4

WDR59-223, Transcript of WD repeat domain 59, human

TSL 1 (best) BASIC

Gene WDR59, Length 1,953 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
WDR59-223	ENST00000616369	CEP135	Q66GS9	1140 aa		13.19	□□□□□ -0.3
WDR59-223	ENST00000616369	ZNF710	Q8N1W2	664 aa		13.19	□□□□□ -0.3
WDR59-223	ENST00000616369	DHX58	Q96C10	678 aa		13.19	□□□□□ -0.3
WDR59-223	ENST00000616369	GPR101	Q96P66	508 aa	Predicted RBP	13.19	□□□□□ -0.3
WDR59-223	ENST00000616369	KAT14	Q9H8E8	782 aa		13.19	□□□□□ -0.3
WDR59-223	ENST00000616369	DACH1	Q9UI36	760 aa		13.19	□□□□□ -0.3
WDR59-223	ENST00000616369	VEGFA	P15692	232 aa	Predicted RBP	13.18	□□□□□ -0.3
WDR59-223	ENST00000616369	ADRA2B	P18089	450 aa		13.18	□□□□□ -0.3
WDR59-223	ENST00000616369	KCNJ6	P48051	423 aa		13.18	□□□□□ -0.3
WDR59-223	ENST00000616369	ATP2C1	P98194	919 aa	Predicted RBP	13.18	□□□□□ -0.3
WDR59-223	ENST00000616369	ZNF827	Q17R98	1081 aa		13.18	□□□□□ -0.3
WDR59-223	ENST00000616369	PNMA1	Q8ND90	353 aa		13.18	□□□□□ -0.3
WDR59-223	ENST00000616369	ANKS1A	Q92625	1134 aa		13.18	□□□□□ -0.3
WDR59-223	ENST00000616369	SYMPK	Q92797	1274 aa	Known RBP	13.18	□□□□□ -0.3
WDR59-223	ENST00000616369	DYNLL2	Q96FJ2	89 aa		13.18	□□□□□ -0.3
WDR59-223	ENST00000616369	TRMT1	Q9NXH9	659 aa	Known RBP	13.18	□□□□□ -0.3
WDR59-223	ENST00000616369	DDX60L	Q5H9U9	1706 aa	Known RBP	13.18	□□□□□ -0.3
WDR59-223	ENST00000616369	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	13.18	□□□□□ -0.3
WDR59-223	ENST00000616369	GPSM2	P81274	684 aa		13.18	□□□□□ -0.3
WDR59-223	ENST00000616369	FMR1	Q06787	632 aa	Known RBP eCLIP	13.18	□□□□□ -0.3
WDR59-223	ENST00000616369	PTGDR	Q13258	359 aa		13.18	□□□□□ -0.3
WDR59-223	ENST00000616369	CRY2	Q49AN0	593 aa		13.18	□□□□□ -0.3
WDR59-223	ENST00000616369	E4F1	Q66K89	784 aa	Predicted RBP	13.18	□□□□□ -0.3
WDR59-223	ENST00000616369	SH3RF1	Q7Z6J0	888 aa		13.18	□□□□□ -0.3
WDR59-223	ENST00000616369	ENOX1	Q8TC92	643 aa	Known RBP	13.18	□□□□□ -0.3
WDR59-223	ENST00000616369	CERK	Q8TCT0	537 aa		13.18	□□□□□ -0.3
WDR59-223	ENST00000616369	RPGR	Q92834	1020 aa	Known RBP	13.18	□□□□□ -0.3
WDR59-223	ENST00000616369	CCDC34	Q96HJ3	373 aa		13.18	□□□□□ -0.3
WDR59-223	ENST00000616369	NRDC	O43847	1150 aa		13.17	□□□□□ -0.3
WDR59-223	ENST00000616369	LDHC	P07864	332 aa		13.17	□□□□□ -0.3
WDR59-223	ENST00000616369	SLFN14	P0C7P3	912 aa		13.17	□□□□□ -0.3
WDR59-223	ENST00000616369	ZNF18	P17022	549 aa		13.17	□□□□□ -0.3
WDR59-223	ENST00000616369	TRAPPC10	P48553	1259 aa		13.17	□□□□□ -0.3
WDR59-223	ENST00000616369	PIK3AP1	Q6ZUJ8	805 aa		13.17	□□□□□ -0.3
WDR59-223	ENST00000616369	VSTM4	Q8IW00	320 aa		13.17	□□□□□ -0.3
WDR59-223	ENST00000616369	AMOTL1	Q8IY63	956 aa		13.17	□□□□□ -0.3
WDR59-223	ENST00000616369	TGFBRAP1	Q8WUH2	860 aa		13.17	□□□□□ -0.3
WDR59-223	ENST00000616369	MKNK2	Q9HBH9	465 aa		13.17	□□□□□ -0.3
WDR59-223	ENST00000616369	NFE2L3	Q9Y4A8	694 aa		13.17	□□□□□ -0.3
WDR59-223	ENST00000616369	MYH1	P12882	1939 aa		13.17	□□□□□ -0.3
WDR59-223	ENST00000616369	VWA3A	A6NCI4	1184 aa		13.16	□□□□□ -0.3
WDR59-223	ENST00000616369	TMEM232	C9JQI7	657 aa		13.16	□□□□□ -0.3
WDR59-223	ENST00000616369	ADAMTS3	O15072	1205 aa		13.16	□□□□□ -0.3
WDR59-223	ENST00000616369	ONECUT3	O60422	494 aa	Predicted RBP	13.16	□□□□□ -0.3
WDR59-223	ENST00000616369	GYS1	P13807	737 aa		13.16	□□□□□ -0.3
WDR59-223	ENST00000616369	CCDC178	Q5BJE1	867 aa		13.16	□□□□□ -0.3
WDR59-223	ENST00000616369	STAG2	Q8N3U4	1231 aa		13.16	□□□□□ -0.3
WDR59-223	ENST00000616369	ZNF592	Q92610	1267 aa		13.16	□□□□□ -0.3
WDR59-223	ENST00000616369	MED15	Q96RN5	788 aa		13.16	□□□□□ -0.3
WDR59-223	ENST00000616369	RTFDC1	Q9BY42	306 aa	Predicted RBP	13.16	□□□□□ -0.3
WDR59-223	ENST00000616369	CD209	Q9NNX6	404 aa		13.16	□□□□□ -0.3
WDR59-223	ENST00000616369	TCP11L1	Q9NUJ3	509 aa		13.16	□□□□□ -0.3
WDR59-223	ENST00000616369	INTS13	Q9NVM9	706 aa		13.16	□□□□□ -0.3
WDR59-223	ENST00000616369	PSD	A5PKW4	1024 aa	Predicted RBP	13.16	□□□□□ -0.3
WDR59-223	ENST00000616369	USP17L3	A6NCW0	530 aa		13.16	□□□□□ -0.3
WDR59-223	ENST00000616369	USP17L4	A6NCW7	530 aa		13.16	□□□□□ -0.3
WDR59-223	ENST00000616369	UFL1	O94874	794 aa		13.16	□□□□□ -0.3
WDR59-223	ENST00000616369	TSPY3	P0CV98	308 aa		13.16	□□□□□ -0.3
WDR59-223	ENST00000616369	TSPY8	P0CW00	308 aa		13.16	□□□□□ -0.3
WDR59-223	ENST00000616369	CALML3	P27482	149 aa		13.16	□□□□□ -0.3
WDR59-223	ENST00000616369	ERCC5	P28715	1186 aa	Predicted RBP	13.16	□□□□□ -0.3
WDR59-223	ENST00000616369	AFM	P43652	599 aa		13.16	□□□□□ -0.3
WDR59-223	ENST00000616369	PLCD1	P51178	756 aa		13.16	□□□□□ -0.3
WDR59-223	ENST00000616369	GRM4	Q14833	912 aa		13.16	□□□□□ -0.3
WDR59-223	ENST00000616369	USP17L1	Q7RTZ2	530 aa		13.16	□□□□□ -0.3
WDR59-223	ENST00000616369	TRMT44	Q8IYL2	757 aa	Known RBP	13.16	□□□□□ -0.3
WDR59-223	ENST00000616369	CCDC112	Q8NEF3	446 aa		13.16	□□□□□ -0.3
WDR59-223	ENST00000616369	PAGE5	Q96GU1	130 aa		13.16	□□□□□ -0.3
WDR59-223	ENST00000616369	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.16	□□□□□ -0.3
WDR59-223	ENST00000616369	SH3GLB2	Q9NR46	395 aa		13.16	□□□□□ -0.3
WDR59-223	ENST00000616369	MAD2L2	Q9UI95	211 aa		13.16	□□□□□ -0.3
WDR59-223	ENST00000616369	FOCAD	Q5VW36	1801 aa		13.15	□□□□□ -0.3
WDR59-223	ENST00000616369	SERPINB2	P05120	415 aa		13.15	□□□□□ -0.3
WDR59-223	ENST00000616369	TOP1	P11387	765 aa	Known RBP	13.15	□□□□□ -0.3
WDR59-223	ENST00000616369	IL1R1	P14778	569 aa		13.15	□□□□□ -0.3
WDR59-223	ENST00000616369	ATP2B4	P23634	1241 aa		13.15	□□□□□ -0.3
WDR59-223	ENST00000616369	HSP90AA4P	Q58FG1	418 aa		13.15	□□□□□ -0.3
WDR59-223	ENST00000616369	CERS3	Q8IU89	383 aa		13.15	□□□□□ -0.3
WDR59-223	ENST00000616369	MAPKAPK5	Q8IW41	473 aa		13.15	□□□□□ -0.3
WDR59-223	ENST00000616369	BLID	Q8IZY5	108 aa		13.15	□□□□□ -0.3
WDR59-223	ENST00000616369	ZNF444	Q8N0Y2	327 aa	Predicted RBP	13.15	□□□□□ -0.3
WDR59-223	ENST00000616369	SLC44A5	Q8NCS7	719 aa		13.15	□□□□□ -0.3
WDR59-223	ENST00000616369	KIF2A	O00139	706 aa	Predicted RBP	13.14	□□□□□ -0.31
WDR59-223	ENST00000616369	MCM7	P33993	719 aa		13.14	□□□□□ -0.31
WDR59-223	ENST00000616369	BTD	P43251	543 aa		13.14	□□□□□ -0.31
WDR59-223	ENST00000616369	GNAQ	P50148	359 aa		13.14	□□□□□ -0.31
WDR59-223	ENST00000616369	ST5	P78524	1137 aa		13.14	□□□□□ -0.31
WDR59-223	ENST00000616369	DPYD	Q12882	1025 aa		13.14	□□□□□ -0.31
WDR59-223	ENST00000616369	CT47A1	Q5JQC4	288 aa	Predicted RBP	13.14	□□□□□ -0.31
WDR59-223	ENST00000616369	MEX3C	Q5U5Q3	659 aa	Known RBP	13.14	□□□□□ -0.31
WDR59-223	ENST00000616369	SEPT12	Q8IYM1	358 aa		13.14	□□□□□ -0.31
WDR59-223	ENST00000616369	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	13.14	□□□□□ -0.31	4e-6	■□□□□ 10.4
WDR59-223	ENST00000616369	PPP1R13B	Q96KQ4	1090 aa		13.14	□□□□□ -0.31
WDR59-223	ENST00000616369	GSDMA	Q96QA5	445 aa		13.14	□□□□□ -0.31
WDR59-223	ENST00000616369	TMX1	Q9H3N1	280 aa		13.14	□□□□□ -0.31
WDR59-223	ENST00000616369	GGA1	Q9UJY5	639 aa		13.14	□□□□□ -0.31
WDR59-223	ENST00000616369	AFF2	P51816	1311 aa		13.14	□□□□□ -0.31
WDR59-223	ENST00000616369	FAM205A	Q6ZU69	1335 aa		13.14	□□□□□ -0.31
WDR59-223	ENST00000616369	RASA1	P20936	1047 aa		13.14	□□□□□ -0.31
WDR59-223	ENST00000616369	CDK11B	P21127	795 aa	Known RBP	13.14	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms