RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 RRP36Q96EU6 259 aaKnown RBP6.34□□□□□ -1.39
SYNCRIP-204ENST00000616122 BRIP1Q9BX63 1249 aa6.34□□□□□ -1.39
SYNCRIP-204ENST00000616122 FAM205CA6NFA0 338 aa6.34□□□□□ -1.39
SYNCRIP-204ENST00000616122 PARP1P09874 1014 aaKnown RBP6.34□□□□□ -1.39
SYNCRIP-204ENST00000616122 ERCC3P19447 782 aa6.34□□□□□ -1.39
SYNCRIP-204ENST00000616122 KRT83P78385 493 aa6.34□□□□□ -1.39
SYNCRIP-204ENST00000616122 NCBP1Q09161 790 aaKnown RBP6.34□□□□□ -1.39
SYNCRIP-204ENST00000616122 TRMT1LQ7Z2T5 733 aaKnown RBP6.34□□□□□ -1.39
SYNCRIP-204ENST00000616122 KRT25Q7Z3Z0 450 aa6.34□□□□□ -1.39
SYNCRIP-204ENST00000616122 CCDC84Q86UT8 332 aaPredicted RBP6.34□□□□□ -1.39
SYNCRIP-204ENST00000616122 STAG1Q8WVM7 1258 aa6.34□□□□□ -1.39
SYNCRIP-204ENST00000616122 ZNF512BQ96KM6 892 aaPredicted RBP6.34□□□□□ -1.39
SYNCRIP-204ENST00000616122 SAP30BPQ9UHR5 308 aaKnown RBP6.34□□□□□ -1.39
SYNCRIP-204ENST00000616122 KNL1Q8NG31 2342 aa6.34□□□□□ -1.39
SYNCRIP-204ENST00000616122 USP27XA6NNY8 438 aa6.34□□□□□ -1.39
SYNCRIP-204ENST00000616122 FAM196AQ6ZSG2 479 aa6.34□□□□□ -1.39
SYNCRIP-204ENST00000616122 TMTC3Q6ZXV5 915 aa6.34□□□□□ -1.39
SYNCRIP-204ENST00000616122 METTL16Q86W50 562 aaKnown RBP6.34□□□□□ -1.39
SYNCRIP-204ENST00000616122 TXLNBQ8N3L3 684 aa6.34□□□□□ -1.39
SYNCRIP-204ENST00000616122 TBC1D22AQ8WUA7 517 aa6.34□□□□□ -1.39
SYNCRIP-204ENST00000616122 PNPLA7Q6ZV29 1317 aa6.34□□□□□ -1.39
SYNCRIP-204ENST00000616122 PREX1Q8TCU6 1659 aa6.34□□□□□ -1.39
SYNCRIP-204ENST00000616122 PRRC2BQ5JSZ5 2229 aaKnown RBP6.34□□□□□ -1.4
SYNCRIP-204ENST00000616122 PRPF3O43395 683 aaKnown RBP6.34□□□□□ -1.4
SYNCRIP-204ENST00000616122 GTPBP6O43824 516 aaPredicted RBP6.34□□□□□ -1.4
SYNCRIP-204ENST00000616122 USP17L8P0C7I0 530 aa6.34□□□□□ -1.4
SYNCRIP-204ENST00000616122 RCAN1P53805 252 aa6.34□□□□□ -1.4
SYNCRIP-204ENST00000616122 E4F1Q66K89 784 aaPredicted RBP6.34□□□□□ -1.4
SYNCRIP-204ENST00000616122 GOLGA1Q92805 767 aa6.34□□□□□ -1.4
SYNCRIP-204ENST00000616122 TRERF1Q96PN7 1200 aa6.34□□□□□ -1.4
SYNCRIP-204ENST00000616122 GGA1Q9UJY5 639 aa6.34□□□□□ -1.4
SYNCRIP-204ENST00000616122 TTF2Q9UNY4 1162 aaKnown RBP6.34□□□□□ -1.4
SYNCRIP-204ENST00000616122 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.33□□□□□ -1.4
SYNCRIP-204ENST00000616122 TRAF5O00463 557 aa6.33□□□□□ -1.4
SYNCRIP-204ENST00000616122 RHOXF2BP0C7M4 288 aa6.33□□□□□ -1.4
SYNCRIP-204ENST00000616122 CASP14P31944 242 aa6.33□□□□□ -1.4
SYNCRIP-204ENST00000616122 DIP2AQ14689 1571 aa6.33□□□□□ -1.4
SYNCRIP-204ENST00000616122 DPF2Q92785 391 aa6.33□□□□□ -1.4
SYNCRIP-204ENST00000616122 SLC4A9Q96Q91 983 aa6.33□□□□□ -1.4
SYNCRIP-204ENST00000616122 EYA3Q99504 573 aa6.33□□□□□ -1.4
SYNCRIP-204ENST00000616122 RHOXF2Q9BQY4 288 aa6.33□□□□□ -1.4
SYNCRIP-204ENST00000616122 CTDP1Q9Y5B0 961 aaPredicted RBP6.33□□□□□ -1.4
SYNCRIP-204ENST00000616122 SMCO2A6NFE2 343 aa6.33□□□□□ -1.4
SYNCRIP-204ENST00000616122 RIMBP2O15034 1052 aa6.33□□□□□ -1.4
SYNCRIP-204ENST00000616122 CDC25BP30305 580 aa6.33□□□□□ -1.4
SYNCRIP-204ENST00000616122 CHMP4BP1P59074 171 aa6.33□□□□□ -1.4
SYNCRIP-204ENST00000616122 GTF2IP78347 998 aa6.33□□□□□ -1.4
SYNCRIP-204ENST00000616122 NTRK3Q16288 839 aa6.33□□□□□ -1.4
SYNCRIP-204ENST00000616122 FOXP4Q8IVH2 680 aaPredicted RBP6.33□□□□□ -1.4
SYNCRIP-204ENST00000616122 SLC44A5Q8NCS7 719 aa6.33□□□□□ -1.4
SYNCRIP-204ENST00000616122 H7C1D1 291 aa6.33□□□□□ -1.4
SYNCRIP-204ENST00000616122 IQCEQ6IPM2 695 aa6.33□□□□□ -1.4
SYNCRIP-204ENST00000616122 LEKR1Q6ZMV7 388 aa6.33□□□□□ -1.4
SYNCRIP-204ENST00000616122 SMIM5Q71RC9 77 aa6.33□□□□□ -1.4
SYNCRIP-204ENST00000616122 TSG101Q99816 390 aa6.33□□□□□ -1.4
SYNCRIP-204ENST00000616122 GTPBP4Q9BZE4 634 aaKnown RBP6.33□□□□□ -1.4
SYNCRIP-204ENST00000616122 DDAH1O94760 285 aa6.33□□□□□ -1.4
SYNCRIP-204ENST00000616122 HERC4Q5GLZ8 1057 aaPredicted RBP6.33□□□□□ -1.4
SYNCRIP-204ENST00000616122 SMAP1Q8IYB5 467 aaPredicted RBP6.33□□□□□ -1.4
SYNCRIP-204ENST00000616122 ZNF622Q969S3 477 aaKnown RBP eCLIP6.33□□□□□ -1.42e-6■□□□□ 10.3
SYNCRIP-204ENST00000616122 CPVLQ9H3G5 476 aa6.33□□□□□ -1.4
SYNCRIP-204ENST00000616122 STK36Q9NRP7 1315 aa6.33□□□□□ -1.4
SYNCRIP-204ENST00000616122 BICDL2A1A5D9 508 aa6.33□□□□□ -1.4
SYNCRIP-204ENST00000616122 RPS6KA4O75676 772 aa6.33□□□□□ -1.4
SYNCRIP-204ENST00000616122 CYP2D6P10635 497 aa6.33□□□□□ -1.4
SYNCRIP-204ENST00000616122 GRIN1Q05586 938 aa6.33□□□□□ -1.4
SYNCRIP-204ENST00000616122 PTPAQ15257 358 aa6.33□□□□□ -1.4
SYNCRIP-204ENST00000616122 SF3B3Q15393 1217 aaKnown RBP6.33□□□□□ -1.4
SYNCRIP-204ENST00000616122 TAF4BQ92750 862 aa6.33□□□□□ -1.4
SYNCRIP-204ENST00000616122 DYNLL2Q96FJ2 89 aa6.33□□□□□ -1.4
SYNCRIP-204ENST00000616122 HAUS4Q9H6D7 363 aa6.33□□□□□ -1.4
SYNCRIP-204ENST00000616122 PPP1R12BO60237 982 aaPredicted RBP6.33□□□□□ -1.4
SYNCRIP-204ENST00000616122 HMGB2P26583 209 aaKnown RBP6.33□□□□□ -1.4
SYNCRIP-204ENST00000616122 SLC1A4P43007 532 aa6.33□□□□□ -1.4
SYNCRIP-204ENST00000616122 FAM193AP78312 1265 aa6.33□□□□□ -1.4
SYNCRIP-204ENST00000616122 VPS36Q86VN1 386 aa6.33□□□□□ -1.4
SYNCRIP-204ENST00000616122 FCHSD1Q86WN1 690 aa6.33□□□□□ -1.4
SYNCRIP-204ENST00000616122 CEP112Q8N8E3 955 aa6.33□□□□□ -1.4
SYNCRIP-204ENST00000616122 SNX29Q8TEQ0 813 aa6.33□□□□□ -1.4
SYNCRIP-204ENST00000616122 LRRC27Q9C0I9 530 aa6.33□□□□□ -1.4
SYNCRIP-204ENST00000616122 GPCPD1Q9NPB8 672 aa6.33□□□□□ -1.4
SYNCRIP-204ENST00000616122 EPN1Q9Y6I3 576 aaPredicted RBP6.33□□□□□ -1.4
SYNCRIP-204ENST00000616122 POTEB2H3BUK9 544 aa6.32□□□□□ -1.4
SYNCRIP-204ENST00000616122 TACC1O75410 805 aa6.32□□□□□ -1.4
SYNCRIP-204ENST00000616122 MAGEA1P43355 309 aa6.32□□□□□ -1.4
SYNCRIP-204ENST00000616122 MECOMQ03112 1051 aa6.32□□□□□ -1.4
SYNCRIP-204ENST00000616122 MAP9Q49MG5 647 aa6.32□□□□□ -1.4
SYNCRIP-204ENST00000616122 RESP18Q5W5W9 173 aa6.32□□□□□ -1.4
SYNCRIP-204ENST00000616122 FBXO38Q6PIJ6 1188 aa6.32□□□□□ -1.4
SYNCRIP-204ENST00000616122 GPIHBP1Q8IV16 184 aa6.32□□□□□ -1.4
SYNCRIP-204ENST00000616122 ZNF579Q8NAF0 562 aaKnown RBP6.32□□□□□ -1.4
SYNCRIP-204ENST00000616122 CCDC51Q96ER9 411 aa6.32□□□□□ -1.4
SYNCRIP-204ENST00000616122 NOC4LQ9BVI4 516 aaKnown RBP6.32□□□□□ -1.4
SYNCRIP-204ENST00000616122 NARFQ9UHQ1 456 aa6.32□□□□□ -1.4
SYNCRIP-204ENST00000616122 CAMTA2O94983 1202 aa6.32□□□□□ -1.4
SYNCRIP-204ENST00000616122 LMAN1P49257 510 aa6.32□□□□□ -1.4
SYNCRIP-204ENST00000616122 CCZ1BP86790 482 aa6.32□□□□□ -1.4
SYNCRIP-204ENST00000616122 CCZ1P86791 482 aaPredicted RBP6.32□□□□□ -1.4
SYNCRIP-204ENST00000616122 GABPB1Q06547 395 aaPredicted RBP6.32□□□□□ -1.4
SYNCRIP-204ENST00000616122 ARMCX5Q6P1M9 558 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms