RNA–Protein interactions for RNA: ENST00000616002.1

RABGAP1-213, Transcript of RAB GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene RABGAP1, Length 1,595 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1-213ENST00000616002 RESTQ13127 1097 aa12.81□□□□□ -0.36
RABGAP1-213ENST00000616002 NMIQ13287 307 aaPredicted RBP12.81□□□□□ -0.36
RABGAP1-213ENST00000616002 SNAPC2Q13487 334 aa12.81□□□□□ -0.36
RABGAP1-213ENST00000616002 IQCB1Q15051 598 aa12.81□□□□□ -0.36
RABGAP1-213ENST00000616002 CAVIN4Q5BKX8 364 aa12.81□□□□□ -0.36
RABGAP1-213ENST00000616002 ERO1BQ86YB8 467 aa12.81□□□□□ -0.36
RABGAP1-213ENST00000616002 DHX37Q8IY37 1157 aaKnown RBP12.81□□□□□ -0.36
RABGAP1-213ENST00000616002 DRC7Q8IY82 874 aa12.81□□□□□ -0.36
RABGAP1-213ENST00000616002 TSC1Q92574 1164 aa12.81□□□□□ -0.36
RABGAP1-213ENST00000616002 GTF3C6Q969F1 213 aa12.81□□□□□ -0.36
RABGAP1-213ENST00000616002 HOOK2Q96ED9 719 aa12.81□□□□□ -0.36
RABGAP1-213ENST00000616002 WRNIP1Q96S55 665 aa12.81□□□□□ -0.36
RABGAP1-213ENST00000616002 PUS3Q9BZE2 481 aaKnown RBP12.81□□□□□ -0.36
RABGAP1-213ENST00000616002 ZCCHC17Q9NP64 241 aaKnown RBP12.81□□□□□ -0.36
RABGAP1-213ENST00000616002 IMPACTQ9P2X3 320 aa12.81□□□□□ -0.36
RABGAP1-213ENST00000616002 CLIP2Q9UDT6 1046 aa12.81□□□□□ -0.36
RABGAP1-213ENST00000616002 COLQQ9Y215 455 aaPredicted RBP12.81□□□□□ -0.36
RABGAP1-213ENST00000616002 MYH15Q9Y2K3 1946 aa12.81□□□□□ -0.36
RABGAP1-213ENST00000616002 GNRH1P01148 92 aa12.81□□□□□ -0.36
RABGAP1-213ENST00000616002 CPA1P15085 419 aa12.81□□□□□ -0.36
RABGAP1-213ENST00000616002 CACNB3P54284 484 aa12.81□□□□□ -0.36
RABGAP1-213ENST00000616002 G3BP1Q13283 466 aaKnown RBP eCLIP12.81□□□□□ -0.36
RABGAP1-213ENST00000616002 STX1AQ16623 288 aa12.81□□□□□ -0.36
RABGAP1-213ENST00000616002 NYAP1Q6ZVC0 841 aa12.81□□□□□ -0.36
RABGAP1-213ENST00000616002 LRRC8AQ8IWT6 810 aa12.81□□□□□ -0.36
RABGAP1-213ENST00000616002 NECAB1Q8N987 351 aa12.81□□□□□ -0.36
RABGAP1-213ENST00000616002 SMARCC2Q8TAQ2 1214 aa12.81□□□□□ -0.36
RABGAP1-213ENST00000616002 SH3TC2Q8TF17 1288 aa12.81□□□□□ -0.36
RABGAP1-213ENST00000616002 ARHGAP39Q9C0H5 1083 aa12.81□□□□□ -0.36
RABGAP1-213ENST00000616002 SNCAIPQ9Y6H5 919 aa12.81□□□□□ -0.36
RABGAP1-213ENST00000616002 BTBD19C9JJ37 291 aa12.8□□□□□ -0.36
RABGAP1-213ENST00000616002 GOLGA6L19H0YKK7 550 aa12.8□□□□□ -0.36
RABGAP1-213ENST00000616002 IRF6O14896 467 aa12.8□□□□□ -0.36
RABGAP1-213ENST00000616002 ABCB7O75027 752 aa12.8□□□□□ -0.36
RABGAP1-213ENST00000616002 GRIK5Q16478 980 aa12.8□□□□□ -0.36
RABGAP1-213ENST00000616002 CEP135Q66GS9 1140 aa12.8□□□□□ -0.36
RABGAP1-213ENST00000616002 FBXO33Q7Z6M2 555 aa12.8□□□□□ -0.36
RABGAP1-213ENST00000616002 AACSQ86V21 672 aa12.8□□□□□ -0.36
RABGAP1-213ENST00000616002 GPIHBP1Q8IV16 184 aa12.8□□□□□ -0.36
RABGAP1-213ENST00000616002 ZNF397Q8NF99 534 aaPredicted RBP12.8□□□□□ -0.36
RABGAP1-213ENST00000616002 ZKSCAN4Q969J2 545 aaPredicted RBP12.8□□□□□ -0.36
RABGAP1-213ENST00000616002 SUCLG2Q96I99 432 aa12.8□□□□□ -0.36
RABGAP1-213ENST00000616002 PGBD1Q96JS3 809 aa12.8□□□□□ -0.36
RABGAP1-213ENST00000616002 RIPOR2Q9Y4F9 1068 aa12.8□□□□□ -0.36
RABGAP1-213ENST00000616002 MAST3O60307 1309 aa12.79□□□□□ -0.36
RABGAP1-213ENST00000616002 ATP5JP18859 108 aa12.79□□□□□ -0.36
RABGAP1-213ENST00000616002 PRMT2P55345 433 aa12.79□□□□□ -0.36
RABGAP1-213ENST00000616002 PPIL2Q13356 520 aa12.79□□□□□ -0.36
RABGAP1-213ENST00000616002 TPD52L1Q16890 204 aaPredicted RBP12.79□□□□□ -0.36
RABGAP1-213ENST00000616002 METTL24Q5JXM2 366 aa12.79□□□□□ -0.36
RABGAP1-213ENST00000616002 DCAF15Q66K64 600 aa12.79□□□□□ -0.36
RABGAP1-213ENST00000616002 FAM83AQ86UY5 434 aa12.79□□□□□ -0.36
RABGAP1-213ENST00000616002 CACTINQ8WUQ7 758 aaKnown RBP12.79□□□□□ -0.36
RABGAP1-213ENST00000616002 ZDHHC15Q96MV8 337 aa12.79□□□□□ -0.36
RABGAP1-213ENST00000616002 BPIFA3Q9BQP9 254 aa12.79□□□□□ -0.36
RABGAP1-213ENST00000616002 LARP6Q9BRS8 491 aaKnown RBP12.79□□□□□ -0.36
RABGAP1-213ENST00000616002 NAT10Q9H0A0 1025 aaKnown RBP12.79□□□□□ -0.36
RABGAP1-213ENST00000616002 ANO10Q9NW15 660 aa12.79□□□□□ -0.36
RABGAP1-213ENST00000616002 H0YGN5 161 aa12.78□□□□□ -0.36
RABGAP1-213ENST00000616002 PFKFB2O60825 505 aa12.78□□□□□ -0.36
RABGAP1-213ENST00000616002 NR1I2O75469 434 aa12.78□□□□□ -0.36
RABGAP1-213ENST00000616002 FKBP1CQ5VVH2 108 aa12.78□□□□□ -0.36
RABGAP1-213ENST00000616002 FBXL16Q8N461 479 aa12.78□□□□□ -0.36
RABGAP1-213ENST00000616002 KAZALD1Q96I82 304 aa12.78□□□□□ -0.36
RABGAP1-213ENST00000616002 ZNF396Q96N95 335 aaPredicted RBP12.78□□□□□ -0.36
RABGAP1-213ENST00000616002 MRIQ9BWK5 157 aa12.78□□□□□ -0.36
RABGAP1-213ENST00000616002 OSBPL5Q9H0X9 879 aaPredicted RBP12.78□□□□□ -0.36
RABGAP1-213ENST00000616002 U2AF2P26368 475 aaKnown RBP eCLIP12.77□□□□□ -0.36
RABGAP1-213ENST00000616002 PPATQ06203 517 aa12.77□□□□□ -0.36
RABGAP1-213ENST00000616002 CAMK4Q16566 473 aa12.77□□□□□ -0.36
RABGAP1-213ENST00000616002 CKAP2LQ8IYA6 745 aa12.77□□□□□ -0.36
RABGAP1-213ENST00000616002 KIF18AQ8NI77 898 aa12.77□□□□□ -0.36
RABGAP1-213ENST00000616002 BICD2Q8TD16 824 aa12.77□□□□□ -0.36
RABGAP1-213ENST00000616002 EAF2Q96CJ1 260 aaPredicted RBP12.77□□□□□ -0.36
RABGAP1-213ENST00000616002 FAM227BQ96M60 508 aa12.77□□□□□ -0.36
RABGAP1-213ENST00000616002 NEK1Q96PY6 1258 aa12.77□□□□□ -0.36
RABGAP1-213ENST00000616002 AGXT2Q9BYV1 514 aa12.77□□□□□ -0.36
RABGAP1-213ENST00000616002 BICC1Q9H694 974 aaKnown RBP12.77□□□□□ -0.36
RABGAP1-213ENST00000616002 ZSWIM8A7E2V4 1837 aa12.77□□□□□ -0.37
RABGAP1-213ENST00000616002 CEP290O15078 2479 aa12.77□□□□□ -0.37
RABGAP1-213ENST00000616002 PDE8BO95263 885 aa12.77□□□□□ -0.37
RABGAP1-213ENST00000616002 HOXD10P28358 340 aa12.77□□□□□ -0.37
RABGAP1-213ENST00000616002 ADD1P35611 737 aaKnown RBP12.77□□□□□ -0.37
RABGAP1-213ENST00000616002 BCAMP50895 628 aa12.77□□□□□ -0.37
RABGAP1-213ENST00000616002 PTPN14Q15678 1187 aa12.77□□□□□ -0.37
RABGAP1-213ENST00000616002 LRRC24Q50LG9 513 aa12.77□□□□□ -0.37
RABGAP1-213ENST00000616002 APOBEC3HQ6NTF7 200 aaKnown RBP12.77□□□□□ -0.37
RABGAP1-213ENST00000616002 MIGA2Q7L4E1 593 aa12.77□□□□□ -0.37
RABGAP1-213ENST00000616002 FSD1Q9BTV5 496 aa12.77□□□□□ -0.37
RABGAP1-213ENST00000616002 ZNF341Q9BYN7 854 aa12.77□□□□□ -0.37
RABGAP1-213ENST00000616002 CPA4Q9UI42 421 aa12.77□□□□□ -0.37
RABGAP1-213ENST00000616002 SUGT1Q9Y2Z0 365 aa12.77□□□□□ -0.37
RABGAP1-213ENST00000616002 A0A0D9SFI3 127 aa12.76□□□□□ -0.37
RABGAP1-213ENST00000616002 A0A1W2PQ27 194 aa12.76□□□□□ -0.37
RABGAP1-213ENST00000616002 A0A1W2PQ64 194 aa12.76□□□□□ -0.37
RABGAP1-213ENST00000616002 A0A1W2PQD8 194 aa12.76□□□□□ -0.37
RABGAP1-213ENST00000616002 PSMC4P43686 418 aa12.76□□□□□ -0.37
RABGAP1-213ENST00000616002 LRMPQ12912 555 aa12.76□□□□□ -0.37
RABGAP1-213ENST00000616002 RABL6Q3YEC7 729 aaPredicted RBP12.76□□□□□ -0.37
RABGAP1-213ENST00000616002 HHIPL2Q6UWX4 724 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms