RNA–Protein interactions for RNA: ENST00000613854.1

HIST1H3A-201, Transcript of histone cluster 1 H3 family member a, humanhuman

APPRIS P1 BASIC

Gene HIST1H3A, Length 411 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3A-201ENST00000613854 ESR2Q92731 530 aa12.86□□□□□ -0.35
HIST1H3A-201ENST00000613854 NUP88Q99567 741 aaPredicted RBP12.86□□□□□ -0.35
HIST1H3A-201ENST00000613854 P2RX7Q99572 595 aaKnown RBP12.86□□□□□ -0.35
HIST1H3A-201ENST00000613854 TANGO6Q9C0B7 1094 aa12.86□□□□□ -0.35
HIST1H3A-201ENST00000613854 VCPKMTQ9H867 229 aa12.86□□□□□ -0.35
HIST1H3A-201ENST00000613854 GOPCQ9HD26 462 aa12.86□□□□□ -0.35
HIST1H3A-201ENST00000613854 ZCCHC17Q9NP64 241 aaKnown RBP12.86□□□□□ -0.35
HIST1H3A-201ENST00000613854 NYAP2Q9P242 653 aa12.86□□□□□ -0.35
HIST1H3A-201ENST00000613854 PNMA3Q9UL41 463 aa12.86□□□□□ -0.35
HIST1H3A-201ENST00000613854 ISY1Q9ULR0 285 aaKnown RBP12.86□□□□□ -0.35
HIST1H3A-201ENST00000613854 TMX2Q9Y320 296 aa12.86□□□□□ -0.35
HIST1H3A-201ENST00000613854 PLIN4Q96Q06 1357 aa12.85□□□□□ -0.35
HIST1H3A-201ENST00000613854 USP17L15C9J2P7 530 aa12.85□□□□□ -0.35
HIST1H3A-201ENST00000613854 USP17L13C9JLJ4 530 aa12.85□□□□□ -0.35
HIST1H3A-201ENST00000613854 USP17L11C9JVI0 530 aa12.85□□□□□ -0.35
HIST1H3A-201ENST00000613854 USP17L18D6R9N7 530 aa12.85□□□□□ -0.35
HIST1H3A-201ENST00000613854 USP17L22D6RA61 530 aa12.85□□□□□ -0.35
HIST1H3A-201ENST00000613854 USP17L17D6RBQ6 530 aa12.85□□□□□ -0.35
HIST1H3A-201ENST00000613854 USP17L19D6RCP7 530 aa12.85□□□□□ -0.35
HIST1H3A-201ENST00000613854 USP17L20D6RJB6 530 aa12.85□□□□□ -0.35
HIST1H3A-201ENST00000613854 E7EWF7 191 aa12.85□□□□□ -0.35
HIST1H3A-201ENST00000613854 SLC27A2O14975 620 aa12.85□□□□□ -0.35
HIST1H3A-201ENST00000613854 TLR2O60603 784 aa12.85□□□□□ -0.35
HIST1H3A-201ENST00000613854 FKTNO75072 461 aa12.85□□□□□ -0.35
HIST1H3A-201ENST00000613854 USP17L24Q0WX57 530 aa12.85□□□□□ -0.35
HIST1H3A-201ENST00000613854 CD99L2Q8TCZ2 262 aa12.85□□□□□ -0.35
HIST1H3A-201ENST00000613854 C12orf42Q96LP6 360 aa12.85□□□□□ -0.35
HIST1H3A-201ENST00000613854 SLC45A1Q9Y2W3 748 aa12.85□□□□□ -0.35
HIST1H3A-201ENST00000613854 F5H6K3 240 aa12.84□□□□□ -0.35
HIST1H3A-201ENST00000613854 PCP11498 1178 aaKnown RBP12.84□□□□□ -0.35
HIST1H3A-201ENST00000613854 SP3Q02447 781 aa12.84□□□□□ -0.35
HIST1H3A-201ENST00000613854 KLRC3Q07444 240 aa12.84□□□□□ -0.35
HIST1H3A-201ENST00000613854 TRDNQ13061 729 aa12.84□□□□□ -0.35
HIST1H3A-201ENST00000613854 FAM83BQ5T0W9 1011 aa12.84□□□□□ -0.35
HIST1H3A-201ENST00000613854 COL13A1Q5TAT6 717 aaPredicted RBP12.84□□□□□ -0.35
HIST1H3A-201ENST00000613854 CREB3L3Q68CJ9 461 aa12.84□□□□□ -0.35
HIST1H3A-201ENST00000613854 CATSPERGQ6ZRH7 1159 aa12.84□□□□□ -0.35
HIST1H3A-201ENST00000613854 STOX1Q6ZVD7 989 aa12.84□□□□□ -0.35
HIST1H3A-201ENST00000613854 ANKRD13CQ8N6S4 541 aa12.84□□□□□ -0.35
HIST1H3A-201ENST00000613854 PAGR1Q9BTK6 254 aa12.84□□□□□ -0.35
HIST1H3A-201ENST00000613854 CFHR5Q9BXR6 569 aa12.84□□□□□ -0.35
HIST1H3A-201ENST00000613854 KRT23Q9C075 422 aa12.84□□□□□ -0.35
HIST1H3A-201ENST00000613854 PRDM10Q9NQV6 1147 aa12.84□□□□□ -0.35
HIST1H3A-201ENST00000613854 ADGRA2Q96PE1 1338 aa12.84□□□□□ -0.35
HIST1H3A-201ENST00000613854 ZSWIM8A7E2V4 1837 aa12.83□□□□□ -0.35
HIST1H3A-201ENST00000613854 NDUFB10O96000 172 aa12.83□□□□□ -0.36
HIST1H3A-201ENST00000613854 HOXA7P31268 230 aaPredicted RBP12.83□□□□□ -0.36
HIST1H3A-201ENST00000613854 HERVK_113P62684 666 aa12.83□□□□□ -0.36
HIST1H3A-201ENST00000613854 SLFN13Q68D06 897 aa12.83□□□□□ -0.36
HIST1H3A-201ENST00000613854 C17orf99Q6UX52 265 aa12.83□□□□□ -0.36
HIST1H3A-201ENST00000613854 CYB5R4Q7L1T6 521 aa12.83□□□□□ -0.36
HIST1H3A-201ENST00000613854 RASGRP2Q7LDG7 609 aa12.83□□□□□ -0.36
HIST1H3A-201ENST00000613854 CHST3Q7LGC8 479 aa12.83□□□□□ -0.36
HIST1H3A-201ENST00000613854 RALYLQ86SE5 291 aaKnown RBP12.83□□□□□ -0.36
HIST1H3A-201ENST00000613854 CNNM2Q9H8M5 875 aa12.83□□□□□ -0.36
HIST1H3A-201ENST00000613854 FBXO28Q9NVF7 368 aa12.83□□□□□ -0.36
HIST1H3A-201ENST00000613854 ZSWIM5Q9P217 1185 aa12.83□□□□□ -0.36
HIST1H3A-201ENST00000613854 FLOT1O75955 427 aa12.82□□□□□ -0.36
HIST1H3A-201ENST00000613854 MCCP23508 829 aa12.82□□□□□ -0.36
HIST1H3A-201ENST00000613854 NECTIN1Q15223 517 aa12.82□□□□□ -0.36
HIST1H3A-201ENST00000613854 IQCA1Q86XH1 822 aa12.82□□□□□ -0.36
HIST1H3A-201ENST00000613854 NCOA7Q8NI08 942 aa12.82□□□□□ -0.36
HIST1H3A-201ENST00000613854 LPAR1Q92633 364 aa12.82□□□□□ -0.36
HIST1H3A-201ENST00000613854 MKL1Q969V6 931 aa12.82□□□□□ -0.36
HIST1H3A-201ENST00000613854 ZSCAN10Q96SZ4 725 aaPredicted RBP12.82□□□□□ -0.36
HIST1H3A-201ENST00000613854 TMEM47Q9BQJ4 181 aa12.82□□□□□ -0.36
HIST1H3A-201ENST00000613854 ARHGAP39Q9C0H5 1083 aa12.82□□□□□ -0.36
HIST1H3A-201ENST00000613854 WDR46O15213 610 aaKnown RBP12.81□□□□□ -0.36
HIST1H3A-201ENST00000613854 REC8O95072 547 aa12.81□□□□□ -0.36
HIST1H3A-201ENST00000613854 BCRP11274 1271 aa12.81□□□□□ -0.36
HIST1H3A-201ENST00000613854 CAP1Q01518 475 aa12.81□□□□□ -0.36
HIST1H3A-201ENST00000613854 COL9A3Q14050 684 aaPredicted RBP12.81□□□□□ -0.36
HIST1H3A-201ENST00000613854 CCDC96Q2M329 555 aa12.81□□□□□ -0.36
HIST1H3A-201ENST00000613854 PPP4R3BQ5MIZ7 849 aa12.81□□□□□ -0.36
HIST1H3A-201ENST00000613854 ERO1AQ96HE7 468 aa12.81□□□□□ -0.36
HIST1H3A-201ENST00000613854 UBAC1Q9BSL1 405 aa12.81□□□□□ -0.36
HIST1H3A-201ENST00000613854 TCP11L1Q9NUJ3 509 aa12.81□□□□□ -0.36
HIST1H3A-201ENST00000613854 TNKSO95271 1327 aa12.81□□□□□ -0.36
HIST1H3A-201ENST00000613854 SPDYE16A6NNV3 312 aaPredicted RBP12.8□□□□□ -0.36
HIST1H3A-201ENST00000613854 TOP1P11387 765 aaKnown RBP12.8□□□□□ -0.36
HIST1H3A-201ENST00000613854 BMP3P12645 472 aa12.8□□□□□ -0.36
HIST1H3A-201ENST00000613854 SLC1A4P43007 532 aa12.8□□□□□ -0.36
HIST1H3A-201ENST00000613854 GCLCP48506 637 aaPredicted RBP12.8□□□□□ -0.36
HIST1H3A-201ENST00000613854 IKQ13123 557 aaPredicted RBP12.8□□□□□ -0.36
HIST1H3A-201ENST00000613854 COG2Q14746 738 aa12.8□□□□□ -0.36
HIST1H3A-201ENST00000613854 KIF22Q14807 665 aa12.8□□□□□ -0.36
HIST1H3A-201ENST00000613854 RNF20Q5VTR2 975 aa12.8□□□□□ -0.36
HIST1H3A-201ENST00000613854 RCSD1Q6JBY9 416 aa12.8□□□□□ -0.36
HIST1H3A-201ENST00000613854 KCTD1Q719H9 257 aa12.8□□□□□ -0.36
HIST1H3A-201ENST00000613854 RASEFQ8IZ41 740 aa12.8□□□□□ -0.36
HIST1H3A-201ENST00000613854 GMCL1P1Q8NEA9 526 aa12.8□□□□□ -0.36
HIST1H3A-201ENST00000613854 ATG4CQ96DT6 458 aa12.8□□□□□ -0.36
HIST1H3A-201ENST00000613854 TXNRD2Q9NNW7 524 aa12.8□□□□□ -0.36
HIST1H3A-201ENST00000613854 GPCPD1Q9NPB8 672 aa12.8□□□□□ -0.36
HIST1H3A-201ENST00000613854 TRIM17Q9Y577 477 aa12.8□□□□□ -0.36
HIST1H3A-201ENST00000613854 FRMPD2Q68DX3 1309 aaPredicted RBP12.8□□□□□ -0.36
HIST1H3A-201ENST00000613854 MGAMO43451 1857 aa12.79□□□□□ -0.36
HIST1H3A-201ENST00000613854 TMEM232C9JQI7 657 aa12.79□□□□□ -0.36
HIST1H3A-201ENST00000613854 IFIT3O14879 490 aaKnown RBP12.79□□□□□ -0.36
HIST1H3A-201ENST00000613854 FMNL1O95466 1100 aaPredicted RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms