RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 TNNI2P48788 182 aa9.78□□□□□ -0.84
LIG4-204ENST00000611712 KIF5AQ12840 1032 aa9.78□□□□□ -0.84
LIG4-204ENST00000611712 TRIM14Q14142 442 aa9.78□□□□□ -0.84
LIG4-204ENST00000611712 ERFEQ4G0M1 354 aa9.78□□□□□ -0.84
LIG4-204ENST00000611712 FCHSD1Q86WN1 690 aa9.78□□□□□ -0.84
LIG4-204ENST00000611712 TEX11Q8IYF3 940 aa9.78□□□□□ -0.84
LIG4-204ENST00000611712 PNMA1Q8ND90 353 aa9.78□□□□□ -0.84
LIG4-204ENST00000611712 COL15A1P39059 1388 aa9.78□□□□□ -0.84
LIG4-204ENST00000611712 STK36Q9NRP7 1315 aa9.78□□□□□ -0.84
LIG4-204ENST00000611712 EFCAB8A8MWE9 144 aa9.78□□□□□ -0.84
LIG4-204ENST00000611712 DDAH1O94760 285 aa9.78□□□□□ -0.84
LIG4-204ENST00000611712 PLEKHA8P1O95397 391 aa9.78□□□□□ -0.84
LIG4-204ENST00000611712 MAPKAPK5Q8IW41 473 aa9.78□□□□□ -0.84
LIG4-204ENST00000611712 WDR66Q8TBY9 1149 aa9.78□□□□□ -0.84
LIG4-204ENST00000611712 TGFBRAP1Q8WUH2 860 aa9.78□□□□□ -0.84
LIG4-204ENST00000611712 DPF2Q92785 391 aa9.78□□□□□ -0.84
LIG4-204ENST00000611712 UBA5Q9GZZ9 404 aa9.78□□□□□ -0.84
LIG4-204ENST00000611712 CCNT1O60563 726 aaKnown RBP9.77□□□□□ -0.85
LIG4-204ENST00000611712 CASP1P29466 404 aa9.77□□□□□ -0.85
LIG4-204ENST00000611712 CDC25AP30304 524 aa9.77□□□□□ -0.85
LIG4-204ENST00000611712 MORC3Q14149 939 aa9.77□□□□□ -0.85
LIG4-204ENST00000611712 FAM98CQ17RN3 349 aaKnown RBP9.77□□□□□ -0.85
LIG4-204ENST00000611712 METTL16Q86W50 562 aaKnown RBP9.77□□□□□ -0.85
LIG4-204ENST00000611712 ALS2CR12Q96Q35 445 aa9.77□□□□□ -0.85
LIG4-204ENST00000611712 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.77□□□□□ -0.85
LIG4-204ENST00000611712 PHACTR2O75167 634 aa9.77□□□□□ -0.85
LIG4-204ENST00000611712 CASP14P31944 242 aa9.77□□□□□ -0.85
LIG4-204ENST00000611712 NKX1-1Q15270 411 aaPredicted RBP9.77□□□□□ -0.85
LIG4-204ENST00000611712 INF2Q27J81 1249 aa9.77□□□□□ -0.85
LIG4-204ENST00000611712 ZNF710Q8N1W2 664 aa9.77□□□□□ -0.85
LIG4-204ENST00000611712 KCNJ18B7U540 433 aa9.77□□□□□ -0.85
LIG4-204ENST00000611712 PRPF3O43395 683 aaKnown RBP9.77□□□□□ -0.85
LIG4-204ENST00000611712 CKAP4Q07065 602 aaKnown RBP9.77□□□□□ -0.85
LIG4-204ENST00000611712 KCNJ12Q14500 433 aa9.77□□□□□ -0.85
LIG4-204ENST00000611712 KRT79Q5XKE5 535 aa9.77□□□□□ -0.85
LIG4-204ENST00000611712 E4F1Q66K89 784 aaPredicted RBP9.77□□□□□ -0.85
LIG4-204ENST00000611712 GPR161Q8N6U8 529 aaKnown RBP9.77□□□□□ -0.85
LIG4-204ENST00000611712 TAF4BQ92750 862 aa9.77□□□□□ -0.85
LIG4-204ENST00000611712 EEF2KMTQ96G04 330 aa9.77□□□□□ -0.85
LIG4-204ENST00000611712 NOC4LQ9BVI4 516 aaKnown RBP9.77□□□□□ -0.85
LIG4-204ENST00000611712 MROH7-TTC4A0A0A0MT08 1334 aa9.77□□□□□ -0.85
LIG4-204ENST00000611712 PHLPP2Q6ZVD8 1323 aa9.77□□□□□ -0.85
LIG4-204ENST00000611712 GTPBP6O43824 516 aaPredicted RBP9.76□□□□□ -0.85
LIG4-204ENST00000611712 PRR29P0C7W0 189 aa9.76□□□□□ -0.85
LIG4-204ENST00000611712 PCP11498 1178 aaKnown RBP9.76□□□□□ -0.85
LIG4-204ENST00000611712 PLCG2P16885 1265 aa9.76□□□□□ -0.85
LIG4-204ENST00000611712 TXKP42681 527 aa9.76□□□□□ -0.85
LIG4-204ENST00000611712 RASGRP4Q8TDF6 673 aa9.76□□□□□ -0.85
LIG4-204ENST00000611712 ATP8A2Q9NTI2 1148 aa9.76□□□□□ -0.85
LIG4-204ENST00000611712 TUBB4BP68371 445 aa9.76□□□□□ -0.85
LIG4-204ENST00000611712 DMTNQ08495 405 aa9.76□□□□□ -0.85
LIG4-204ENST00000611712 RBL2Q08999 1139 aa9.76□□□□□ -0.85
LIG4-204ENST00000611712 PAGE5Q96GU1 130 aa9.76□□□□□ -0.85
LIG4-204ENST00000611712 CENPHQ9H3R5 247 aa9.76□□□□□ -0.85
LIG4-204ENST00000611712 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.76□□□□□ -0.85
LIG4-204ENST00000611712 CCNL1Q9UK58 526 aaPredicted RBP9.76□□□□□ -0.85
LIG4-204ENST00000611712 CTDP1Q9Y5B0 961 aaPredicted RBP9.76□□□□□ -0.85
LIG4-204ENST00000611712 MACROD2A1Z1Q3 448 aa9.76□□□□□ -0.85
LIG4-204ENST00000611712 UBE2Q2LH0YL09 131 aa9.76□□□□□ -0.85
LIG4-204ENST00000611712 GOLGA8HP0CJ92 632 aa9.76□□□□□ -0.85
LIG4-204ENST00000611712 NONOQ15233 471 aaKnown RBP eCLIP9.76□□□□□ -0.85
LIG4-204ENST00000611712 ENAHQ8N8S7 591 aaPredicted RBP9.76□□□□□ -0.85
LIG4-204ENST00000611712 CCDC51Q96ER9 411 aa9.76□□□□□ -0.85
LIG4-204ENST00000611712 ZNF512BQ96KM6 892 aaPredicted RBP9.76□□□□□ -0.85
LIG4-204ENST00000611712 LRRC27Q9C0I9 530 aa9.76□□□□□ -0.85
LIG4-204ENST00000611712 EPB41L4AQ9HCS5 686 aaPredicted RBP9.76□□□□□ -0.85
LIG4-204ENST00000611712 TACC1O75410 805 aa9.75□□□□□ -0.85
LIG4-204ENST00000611712 UFL1O94874 794 aa9.75□□□□□ -0.85
LIG4-204ENST00000611712 RPN1P04843 607 aaKnown RBP9.75□□□□□ -0.85
LIG4-204ENST00000611712 EIF6P56537 245 aaKnown RBP9.75□□□□□ -0.85
LIG4-204ENST00000611712 SV2BQ7L1I2 683 aa9.75□□□□□ -0.85
LIG4-204ENST00000611712 ILDR1Q86SU0 546 aaPredicted RBP9.75□□□□□ -0.85
LIG4-204ENST00000611712 CNBD1Q8NA66 436 aa9.75□□□□□ -0.85
LIG4-204ENST00000611712 VPS18Q9P253 973 aa9.75□□□□□ -0.85
LIG4-204ENST00000611712 SOWAHDA6NJG2 315 aa9.75□□□□□ -0.85
LIG4-204ENST00000611712 ST5P78524 1137 aa9.75□□□□□ -0.85
LIG4-204ENST00000611712 CTR9Q6PD62 1173 aa9.75□□□□□ -0.85
LIG4-204ENST00000611712 HDXQ7Z353 690 aa9.75□□□□□ -0.85
LIG4-204ENST00000611712 CABP7Q86V35 215 aa9.75□□□□□ -0.85
LIG4-204ENST00000611712 ZNF579Q8NAF0 562 aaKnown RBP9.75□□□□□ -0.85
LIG4-204ENST00000611712 OR8K1Q8NGG5 319 aa9.75□□□□□ -0.85
LIG4-204ENST00000611712 TUBE1Q9UJT0 475 aa9.75□□□□□ -0.85
LIG4-204ENST00000611712 CACNA1FO60840 1977 aa9.75□□□□□ -0.85
LIG4-204ENST00000611712 CTIFO43310 598 aaKnown RBP9.75□□□□□ -0.85
LIG4-204ENST00000611712 HLA-DOAP06340 250 aa9.75□□□□□ -0.85
LIG4-204ENST00000611712 ERCC3P19447 782 aa9.75□□□□□ -0.85
LIG4-204ENST00000611712 CLCN6P51797 869 aa9.75□□□□□ -0.85
LIG4-204ENST00000611712 KMT5BQ4FZB7 885 aa9.75□□□□□ -0.85
LIG4-204ENST00000611712 TCERG1LQ5VWI1 586 aa9.75□□□□□ -0.85
LIG4-204ENST00000611712 DDX41Q9UJV9 622 aaKnown RBP9.75□□□□□ -0.85
LIG4-204ENST00000611712 COPB1P53618 953 aaKnown RBP9.74□□□□□ -0.85
LIG4-204ENST00000611712 TUBB2AQ13885 445 aa9.74□□□□□ -0.85
LIG4-204ENST00000611712 TRAPPC3LQ5T215 181 aa9.74□□□□□ -0.85
LIG4-204ENST00000611712 KRT25Q7Z3Z0 450 aa9.74□□□□□ -0.85
LIG4-204ENST00000611712 GPIHBP1Q8IV16 184 aa9.74□□□□□ -0.85
LIG4-204ENST00000611712 ANKRD7Q92527 254 aa9.74□□□□□ -0.85
LIG4-204ENST00000611712 TUBB2BQ9BVA1 445 aa9.74□□□□□ -0.85
LIG4-204ENST00000611712 GPCPD1Q9NPB8 672 aa9.74□□□□□ -0.85
LIG4-204ENST00000611712 ZNF804BA4D1E1 1349 aa9.74□□□□□ -0.85
LIG4-204ENST00000611712 FER1L4A9Z1Z3 1794 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms