RNA–Protein interactions for RNA: ENST00000611405.4

SRRT-213, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SRRT, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-213ENST00000611405 GRM4Q14833 912 aa13.63□□□□□ -0.23
SRRT-213ENST00000611405 PNMA1Q8ND90 353 aa13.63□□□□□ -0.23
SRRT-213ENST00000611405 TBC1D22AQ8WUA7 517 aa13.63□□□□□ -0.23
SRRT-213ENST00000611405 QTRT2Q9H974 415 aaKnown RBP13.63□□□□□ -0.23
SRRT-213ENST00000611405 SH3GLB2Q9NR46 395 aa13.63□□□□□ -0.23
SRRT-213ENST00000611405 DACH1Q9UI36 760 aa13.63□□□□□ -0.23
SRRT-213ENST00000611405 MAN1B1Q9UKM7 699 aa13.63□□□□□ -0.23
SRRT-213ENST00000611405 CBFA2T2O43439 604 aa13.62□□□□□ -0.23
SRRT-213ENST00000611405 ACTN4O43707 911 aaKnown RBP13.62□□□□□ -0.23
SRRT-213ENST00000611405 TSPY3P0CV98 308 aa13.62□□□□□ -0.23
SRRT-213ENST00000611405 TSPY8P0CW00 308 aa13.62□□□□□ -0.23
SRRT-213ENST00000611405 BTDP43251 543 aa13.62□□□□□ -0.23
SRRT-213ENST00000611405 SARSP49591 514 aaKnown RBP13.62□□□□□ -0.23
SRRT-213ENST00000611405 SAMD1Q6SPF0 538 aaPredicted RBP13.62□□□□□ -0.23
SRRT-213ENST00000611405 SMARCE1Q969G3 411 aa13.62□□□□□ -0.23
SRRT-213ENST00000611405 FAM163AQ96GL9 167 aaPredicted RBP13.62□□□□□ -0.23
SRRT-213ENST00000611405 KLRG2A4D1S0 409 aaPredicted RBP13.62□□□□□ -0.23
SRRT-213ENST00000611405 FOXN1O15353 648 aa13.62□□□□□ -0.23
SRRT-213ENST00000611405 SLC4A8Q2Y0W8 1093 aa13.62□□□□□ -0.23
SRRT-213ENST00000611405 MLKLQ8NB16 471 aa13.62□□□□□ -0.23
SRRT-213ENST00000611405 CCDC150Q8NCX0 1101 aa13.62□□□□□ -0.23
SRRT-213ENST00000611405 TBC1D16Q8TBP0 767 aa13.62□□□□□ -0.23
SRRT-213ENST00000611405 HSD3B7Q9H2F3 369 aa13.62□□□□□ -0.23
SRRT-213ENST00000611405 SKILP12757 684 aa13.61□□□□□ -0.23
SRRT-213ENST00000611405 LMOD1P29536 600 aaPredicted RBP13.61□□□□□ -0.23
SRRT-213ENST00000611405 DDR1Q08345 913 aa13.61□□□□□ -0.23
SRRT-213ENST00000611405 ARID5BQ14865 1188 aa13.61□□□□□ -0.23
SRRT-213ENST00000611405 MAPKAPK5Q8IW41 473 aa13.61□□□□□ -0.23
SRRT-213ENST00000611405 POLRMTO00411 1230 aaKnown RBP13.61□□□□□ -0.23
SRRT-213ENST00000611405 ATP2C1P98194 919 aaPredicted RBP13.61□□□□□ -0.23
SRRT-213ENST00000611405 MORC3Q14149 939 aa13.61□□□□□ -0.23
SRRT-213ENST00000611405 ZNF174Q15697 407 aa13.61□□□□□ -0.23
SRRT-213ENST00000611405 TEX11Q8IYF3 940 aa13.61□□□□□ -0.23
SRRT-213ENST00000611405 GTF2F1P35269 517 aaKnown RBP eCLIP13.6□□□□□ -0.235e-6■■■■□ 24.4
SRRT-213ENST00000611405 CCZ1BP86790 482 aa13.6□□□□□ -0.23
SRRT-213ENST00000611405 CCZ1P86791 482 aaPredicted RBP13.6□□□□□ -0.23
SRRT-213ENST00000611405 USP49Q70CQ1 688 aa13.6□□□□□ -0.23
SRRT-213ENST00000611405 KRT27Q7Z3Y8 459 aa13.6□□□□□ -0.23
SRRT-213ENST00000611405 TMC6Q7Z403 805 aa13.6□□□□□ -0.23
SRRT-213ENST00000611405 DHX37Q8IY37 1157 aaKnown RBP13.6□□□□□ -0.23
SRRT-213ENST00000611405 LZTS2Q9BRK4 669 aa13.6□□□□□ -0.23
SRRT-213ENST00000611405 POLLQ9UGP5 575 aa13.6□□□□□ -0.23
SRRT-213ENST00000611405 USP17L3A6NCW0 530 aa13.6□□□□□ -0.23
SRRT-213ENST00000611405 USP17L4A6NCW7 530 aa13.6□□□□□ -0.23
SRRT-213ENST00000611405 SLFN14P0C7P3 912 aa13.6□□□□□ -0.23
SRRT-213ENST00000611405 PRR29P0C7W0 189 aa13.6□□□□□ -0.23
SRRT-213ENST00000611405 RASA1P20936 1047 aa13.6□□□□□ -0.23
SRRT-213ENST00000611405 BMP6P22004 513 aa13.6□□□□□ -0.23
SRRT-213ENST00000611405 PLCD1P51178 756 aa13.6□□□□□ -0.23
SRRT-213ENST00000611405 USP17L1Q7RTZ2 530 aa13.6□□□□□ -0.23
SRRT-213ENST00000611405 PDILTQ8N807 584 aa13.6□□□□□ -0.23
SRRT-213ENST00000611405 SPATA20Q8TB22 786 aa13.6□□□□□ -0.23
SRRT-213ENST00000611405 SAP30BPQ9UHR5 308 aaKnown RBP13.6□□□□□ -0.23
SRRT-213ENST00000611405 FAM205AQ6ZU69 1335 aa13.6□□□□□ -0.23
SRRT-213ENST00000611405 NAV1Q8NEY1 1877 aa13.6□□□□□ -0.23
SRRT-213ENST00000611405 TPD52L1Q16890 204 aaPredicted RBP13.6□□□□□ -0.23
SRRT-213ENST00000611405 CT47A1Q5JQC4 288 aaPredicted RBP13.6□□□□□ -0.23
SRRT-213ENST00000611405 MFSD14BQ5SR56 506 aa13.6□□□□□ -0.23
SRRT-213ENST00000611405 C16orf86Q6ZW13 317 aa13.6□□□□□ -0.23
SRRT-213ENST00000611405 SP8Q8IXZ3 490 aa13.6□□□□□ -0.23
SRRT-213ENST00000611405 FAM177A1Q8N128 213 aaPredicted RBP13.6□□□□□ -0.23
SRRT-213ENST00000611405 KCND1Q9NSA2 647 aa13.6□□□□□ -0.23
SRRT-213ENST00000611405 MAD2L2Q9UI95 211 aa13.6□□□□□ -0.23
SRRT-213ENST00000611405 GAKO14976 1311 aa13.59□□□□□ -0.23
SRRT-213ENST00000611405 SERPINC1P01008 464 aa13.59□□□□□ -0.23
SRRT-213ENST00000611405 UBASH3AP57075 661 aa13.59□□□□□ -0.23
SRRT-213ENST00000611405 PTGDRQ13258 359 aa13.59□□□□□ -0.23
SRRT-213ENST00000611405 NOM1Q5C9Z4 860 aaKnown RBP13.59□□□□□ -0.23
SRRT-213ENST00000611405 PIK3AP1Q6ZUJ8 805 aa13.59□□□□□ -0.23
SRRT-213ENST00000611405 BLIDQ8IZY5 108 aa13.59□□□□□ -0.23
SRRT-213ENST00000611405 SYMPKQ92797 1274 aaKnown RBP13.59□□□□□ -0.23
SRRT-213ENST00000611405 DHX58Q96C10 678 aa13.59□□□□□ -0.23
SRRT-213ENST00000611405 PYM1Q9BRP8 204 aaKnown RBP13.59□□□□□ -0.23
SRRT-213ENST00000611405 PCDHA4Q9UN74 947 aa13.59□□□□□ -0.23
SRRT-213ENST00000611405 C6orf229H3BNL8 230 aa13.59□□□□□ -0.23
SRRT-213ENST00000611405 WNT7AO00755 349 aa13.59□□□□□ -0.23
SRRT-213ENST00000611405 RRP9O43818 475 aaKnown RBP13.59□□□□□ -0.23
SRRT-213ENST00000611405 TRIM37O94972 964 aa13.59□□□□□ -0.23
SRRT-213ENST00000611405 ATP1A3P13637 1013 aa13.59□□□□□ -0.23
SRRT-213ENST00000611405 GALNT17Q6IS24 598 aa13.59□□□□□ -0.23
SRRT-213ENST00000611405 SH3RF1Q7Z6J0 888 aa13.59□□□□□ -0.23
SRRT-213ENST00000611405 ENOX1Q8TC92 643 aaKnown RBP13.59□□□□□ -0.23
SRRT-213ENST00000611405 EPSTI1Q96J88 318 aa13.59□□□□□ -0.23
SRRT-213ENST00000611405 TMEM47Q9BQJ4 181 aa13.59□□□□□ -0.23
SRRT-213ENST00000611405 PPEF1O14829 653 aaPredicted RBP13.58□□□□□ -0.24
SRRT-213ENST00000611405 NRDCO43847 1150 aa13.58□□□□□ -0.24
SRRT-213ENST00000611405 CDK8P49336 464 aa13.58□□□□□ -0.24
SRRT-213ENST00000611405 STAG2Q8N3U4 1231 aa13.58□□□□□ -0.24
SRRT-213ENST00000611405 SLC44A5Q8NCS7 719 aa13.58□□□□□ -0.24
SRRT-213ENST00000611405 CCDC148Q8NFR7 591 aa13.58□□□□□ -0.24
SRRT-213ENST00000611405 FANCLQ9NW38 375 aa13.58□□□□□ -0.24
SRRT-213ENST00000611405 PALM3A6NDB9 673 aaPredicted RBP13.58□□□□□ -0.24
SRRT-213ENST00000611405 RHBDL3P58872 404 aa13.58□□□□□ -0.24
SRRT-213ENST00000611405 GRAMD1CQ8IYS0 662 aa13.58□□□□□ -0.24
SRRT-213ENST00000611405 NEDD1Q8NHV4 660 aa13.58□□□□□ -0.24
SRRT-213ENST00000611405 EYA3Q99504 573 aa13.58□□□□□ -0.24
SRRT-213ENST00000611405 FLT1P17948 1338 aa13.58□□□□□ -0.24
SRRT-213ENST00000611405 A0A087X0B3 334 aa13.57□□□□□ -0.24
SRRT-213ENST00000611405 TNNT1P13805 278 aa13.57□□□□□ -0.24
SRRT-213ENST00000611405 VEGFAP15692 232 aaPredicted RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 216.5 ms