RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 HOXC10Q9NYD6 342 aa16.93■□□□□ 0.3
HDDC2-209ENST00000609477 MORF4L1Q9UBU8 362 aa16.93■□□□□ 0.3
HDDC2-209ENST00000609477 WDR46O15213 610 aaKnown RBP16.92■□□□□ 0.3
HDDC2-209ENST00000609477 PRDM1O75626 825 aa16.92■□□□□ 0.3
HDDC2-209ENST00000609477 TTLL1O95922 423 aa16.92■□□□□ 0.3
HDDC2-209ENST00000609477 PSMC4P43686 418 aa16.92■□□□□ 0.3
HDDC2-209ENST00000609477 TFAP4Q01664 338 aa16.92■□□□□ 0.3
HDDC2-209ENST00000609477 CTDSPL2Q05D32 466 aa16.92■□□□□ 0.3
HDDC2-209ENST00000609477 MFSD6Q6ZSS7 791 aa16.92■□□□□ 0.3
HDDC2-209ENST00000609477 ANKRD13CQ8N6S4 541 aa16.92■□□□□ 0.3
HDDC2-209ENST00000609477 STAG1Q8WVM7 1258 aa16.92■□□□□ 0.3
HDDC2-209ENST00000609477 ABHD8Q96I13 439 aa16.92■□□□□ 0.3
HDDC2-209ENST00000609477 RPAP3Q9H6T3 665 aaPredicted RBP16.92■□□□□ 0.3
HDDC2-209ENST00000609477 PTPN22Q9Y2R2 807 aa16.92■□□□□ 0.3
HDDC2-209ENST00000609477 MYPNQ86TC9 1320 aa16.92■□□□□ 0.3
HDDC2-209ENST00000609477 TSPY2A6NKD2 308 aa16.91■□□□□ 0.3
HDDC2-209ENST00000609477 SGSM2O43147 1006 aa16.91■□□□□ 0.3
HDDC2-209ENST00000609477 FCGRTP55899 365 aa16.91■□□□□ 0.3
HDDC2-209ENST00000609477 COG2Q14746 738 aa16.91■□□□□ 0.3
HDDC2-209ENST00000609477 IMMTQ16891 758 aaKnown RBP16.91■□□□□ 0.3
HDDC2-209ENST00000609477 AKNAD1Q5T1N1 836 aa16.91■□□□□ 0.3
HDDC2-209ENST00000609477 IFFO2Q5TF58 517 aa16.91■□□□□ 0.3
HDDC2-209ENST00000609477 TCP11L1Q9NUJ3 509 aa16.91■□□□□ 0.3
HDDC2-209ENST00000609477 RABGAP1Q9Y3P9 1069 aa16.91■□□□□ 0.3
HDDC2-209ENST00000609477 FMNL1O95466 1100 aaPredicted RBP16.9■□□□□ 0.3
HDDC2-209ENST00000609477 ATP2B2Q01814 1243 aa16.9■□□□□ 0.3
HDDC2-209ENST00000609477 GPRC5AQ8NFJ5 357 aa16.9■□□□□ 0.3
HDDC2-209ENST00000609477 CEP95Q96GE4 821 aa16.9■□□□□ 0.3
HDDC2-209ENST00000609477 LAMA4Q16363 1823 aa16.9■□□□□ 0.3
HDDC2-209ENST00000609477 MGAMO43451 1857 aa16.89■□□□□ 0.29
HDDC2-209ENST00000609477 RANBP6O60518 1105 aaKnown RBP16.89■□□□□ 0.29
HDDC2-209ENST00000609477 NOVP48745 357 aa16.89■□□□□ 0.29
HDDC2-209ENST00000609477 CLEC10AQ8IUN9 316 aa16.89■□□□□ 0.29
HDDC2-209ENST00000609477 MB21D1Q8N884 522 aa16.89■□□□□ 0.29
HDDC2-209ENST00000609477 GMCL1P1Q8NEA9 526 aa16.89■□□□□ 0.29
HDDC2-209ENST00000609477 TRIM47Q96LD4 638 aa16.89■□□□□ 0.29
HDDC2-209ENST00000609477 RBPJLQ9UBG7 517 aa16.89■□□□□ 0.29
HDDC2-209ENST00000609477 CLIP2Q9UDT6 1046 aa16.89■□□□□ 0.29
HDDC2-209ENST00000609477 SRRDQ9UH36 339 aa16.89■□□□□ 0.29
HDDC2-209ENST00000609477 MYH4Q9Y623 1939 aa16.88■□□□□ 0.29
HDDC2-209ENST00000609477 F5H6K3 240 aa16.88■□□□□ 0.29
HDDC2-209ENST00000609477 CCNA1P78396 465 aa16.88■□□□□ 0.29
HDDC2-209ENST00000609477 KLRC3Q07444 240 aa16.88■□□□□ 0.29
HDDC2-209ENST00000609477 CCDC178Q5BJE1 867 aa16.88■□□□□ 0.29
HDDC2-209ENST00000609477 FAM47AQ5JRC9 791 aa16.88■□□□□ 0.29
HDDC2-209ENST00000609477 CASC1Q6TDU7 716 aa16.88■□□□□ 0.29
HDDC2-209ENST00000609477 ESR2Q92731 530 aa16.88■□□□□ 0.29
HDDC2-209ENST00000609477 COA7Q96BR5 231 aa16.88■□□□□ 0.29
HDDC2-209ENST00000609477 TTC14Q96N46 770 aa16.88■□□□□ 0.29
HDDC2-209ENST00000609477 TANGO6Q9C0B7 1094 aa16.88■□□□□ 0.29
HDDC2-209ENST00000609477 ARHGAP39Q9C0H5 1083 aa16.88■□□□□ 0.29
HDDC2-209ENST00000609477 CNNM2Q9H8M5 875 aa16.88■□□□□ 0.29
HDDC2-209ENST00000609477 TOMM22Q9NS69 142 aa16.88■□□□□ 0.29
HDDC2-209ENST00000609477 HPS5Q9UPZ3 1129 aa16.88■□□□□ 0.29
HDDC2-209ENST00000609477 SPDYE16A6NNV3 312 aaPredicted RBP16.87■□□□□ 0.29
HDDC2-209ENST00000609477 TNPO2O14787 897 aaKnown RBP16.87■□□□□ 0.29
HDDC2-209ENST00000609477 MAPK4P31152 587 aa16.87■□□□□ 0.29
HDDC2-209ENST00000609477 HAND2P61296 217 aa16.87■□□□□ 0.29
HDDC2-209ENST00000609477 ERVK-9P63128 1117 aa16.87■□□□□ 0.29
HDDC2-209ENST00000609477 ERVK-24P63145 666 aa16.87■□□□□ 0.29
HDDC2-209ENST00000609477 CAP1Q01518 475 aa16.87■□□□□ 0.29
HDDC2-209ENST00000609477 KIAA1755Q5JYT7 1200 aa16.87■□□□□ 0.29
HDDC2-209ENST00000609477 KIAA1211Q6ZU35 1233 aa16.87■□□□□ 0.29
HDDC2-209ENST00000609477 NBPF11Q86T75 865 aa16.87■□□□□ 0.29
HDDC2-209ENST00000609477 SPICE1Q8N0Z3 855 aa16.87■□□□□ 0.29
HDDC2-209ENST00000609477 KRT23Q9C075 422 aa16.87■□□□□ 0.29
HDDC2-209ENST00000609477 NBPF3Q9H094 633 aa16.87■□□□□ 0.29
HDDC2-209ENST00000609477 IL25Q9H293 177 aa16.87■□□□□ 0.29
HDDC2-209ENST00000609477 IL17RBQ9NRM6 502 aa16.87■□□□□ 0.29
HDDC2-209ENST00000609477 U3KPZ7 1027 aaPredicted RBP16.87■□□□□ 0.29
HDDC2-209ENST00000609477 FLOT1O75955 427 aa16.86■□□□□ 0.29
HDDC2-209ENST00000609477 CTGFP29279 349 aa16.86■□□□□ 0.29
HDDC2-209ENST00000609477 DSG3P32926 999 aa16.86■□□□□ 0.29
HDDC2-209ENST00000609477 MAP4K1Q92918 833 aa16.86■□□□□ 0.29
HDDC2-209ENST00000609477 TXNRD2Q9NNW7 524 aa16.86■□□□□ 0.29
HDDC2-209ENST00000609477 INCENPQ9NQS7 918 aa16.86■□□□□ 0.29
HDDC2-209ENST00000609477 ADAMTS5Q9UNA0 930 aa16.86■□□□□ 0.29
HDDC2-209ENST00000609477 STX8Q9UNK0 236 aa16.86■□□□□ 0.29
HDDC2-209ENST00000609477 TACC3Q9Y6A5 838 aa16.86■□□□□ 0.29
HDDC2-209ENST00000609477 IRF5Q13568 498 aa16.85■□□□□ 0.29
HDDC2-209ENST00000609477 RRP12Q5JTH9 1297 aaKnown RBP16.85■□□□□ 0.29
HDDC2-209ENST00000609477 IQCA1Q86XH1 822 aa16.85■□□□□ 0.29
HDDC2-209ENST00000609477 TBC1D10CQ8IV04 446 aa16.85■□□□□ 0.29
HDDC2-209ENST00000609477 CCAR1Q8IX12 1150 aaKnown RBP16.85■□□□□ 0.29
HDDC2-209ENST00000609477 GMCL1Q96IK5 515 aa16.85■□□□□ 0.29
HDDC2-209ENST00000609477 ESYT1Q9BSJ8 1104 aa16.85■□□□□ 0.29
HDDC2-209ENST00000609477 RLFQ13129 1914 aa16.85■□□□□ 0.29
HDDC2-209ENST00000609477 PARP14Q460N5 1801 aa16.84■□□□□ 0.29
HDDC2-209ENST00000609477 NDUFB10O96000 172 aa16.84■□□□□ 0.29
HDDC2-209ENST00000609477 FDX1P10109 184 aa16.84■□□□□ 0.29
HDDC2-209ENST00000609477 DGKHQ86XP1 1220 aa16.84■□□□□ 0.29
HDDC2-209ENST00000609477 PRPF38AQ8NAV1 312 aaKnown RBP16.84■□□□□ 0.29
HDDC2-209ENST00000609477 RAET1EQ8TD07 263 aa16.84■□□□□ 0.29
HDDC2-209ENST00000609477 ARMC5Q96C12 935 aa16.84■□□□□ 0.29
HDDC2-209ENST00000609477 PAGR1Q9BTK6 254 aa16.84■□□□□ 0.29
HDDC2-209ENST00000609477 FEM1BQ9UK73 627 aa16.84■□□□□ 0.29
HDDC2-209ENST00000609477 A0A0G2JMZ2 1700 aa16.83■□□□□ 0.28
HDDC2-209ENST00000609477 ZSWIM8A7E2V4 1837 aa16.83■□□□□ 0.28
HDDC2-209ENST00000609477 RAD21O60216 631 aa16.83■□□□□ 0.28
HDDC2-209ENST00000609477 PLA2G6O60733 806 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms