RNA–Protein interactions for RNA: ENST00000608426.1

LINC00343-211, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 709 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-211ENST00000608426 COL17A1Q9UMD9 1497 aaPredicted RBP9.47□□□□□ -0.89
LINC00343-211ENST00000608426 LOC100996750A0A140TA64 210 aa9.47□□□□□ -0.89
LINC00343-211ENST00000608426 CLEC3AO75596 197 aa9.47□□□□□ -0.89
LINC00343-211ENST00000608426 CCNFP41002 786 aa9.47□□□□□ -0.89
LINC00343-211ENST00000608426 RNF4P78317 190 aa9.47□□□□□ -0.89
LINC00343-211ENST00000608426 RUFY4Q6ZNE9 571 aa9.47□□□□□ -0.89
LINC00343-211ENST00000608426 VPS37DQ86XT2 251 aa9.47□□□□□ -0.89
LINC00343-211ENST00000608426 WFDC3Q8IUB2 231 aa9.47□□□□□ -0.89
LINC00343-211ENST00000608426 RBBP8NLQ8NC74 664 aaPredicted RBP9.47□□□□□ -0.89
LINC00343-211ENST00000608426 AGBL5Q8NDL9 886 aa9.47□□□□□ -0.89
LINC00343-211ENST00000608426 TM9SF2Q99805 663 aa9.47□□□□□ -0.89
LINC00343-211ENST00000608426 KRTAP4-6Q9BYQ5 205 aa9.47□□□□□ -0.89
LINC00343-211ENST00000608426 SEMA3GQ9NS98 782 aa9.47□□□□□ -0.89
LINC00343-211ENST00000608426 ZSWIM5Q9P217 1185 aa9.47□□□□□ -0.89
LINC00343-211ENST00000608426 OAS3Q9Y6K5 1087 aaKnown RBP9.47□□□□□ -0.89
LINC00343-211ENST00000608426 PLCL1Q15111 1095 aa9.46□□□□□ -0.9
LINC00343-211ENST00000608426 XP32Q5T750 250 aa9.46□□□□□ -0.9
LINC00343-211ENST00000608426 ANGEL2Q5VTE6 544 aaKnown RBP9.46□□□□□ -0.9
LINC00343-211ENST00000608426 UBE2FQ969M7 185 aa9.46□□□□□ -0.9
LINC00343-211ENST00000608426 ZNF512BQ96KM6 892 aaPredicted RBP9.46□□□□□ -0.9
LINC00343-211ENST00000608426 SLC6A18Q96N87 628 aa9.46□□□□□ -0.9
LINC00343-211ENST00000608426 ATP13A1Q9HD20 1204 aa9.46□□□□□ -0.9
LINC00343-211ENST00000608426 ACRP10323 421 aa9.45□□□□□ -0.9
LINC00343-211ENST00000608426 ATF4P18848 351 aaPredicted RBP9.45□□□□□ -0.9
LINC00343-211ENST00000608426 INTS3Q68E01 1043 aaKnown RBP9.45□□□□□ -0.9
LINC00343-211ENST00000608426 THAP5Q7Z6K1 395 aa9.45□□□□□ -0.9
LINC00343-211ENST00000608426 TMEM192Q8IY95 271 aa9.45□□□□□ -0.9
LINC00343-211ENST00000608426 ABI1Q8IZP0 508 aa9.45□□□□□ -0.9
LINC00343-211ENST00000608426 GUCY2CP25092 1073 aa9.44□□□□□ -0.9
LINC00343-211ENST00000608426 GIPRP48546 466 aa9.44□□□□□ -0.9
LINC00343-211ENST00000608426 NBPF12Q5TAG4 269 aaPredicted RBP9.44□□□□□ -0.9
LINC00343-211ENST00000608426 TAB3Q8N5C8 712 aaPredicted RBP9.44□□□□□ -0.9
LINC00343-211ENST00000608426 VWCEQ96DN2 955 aa9.44□□□□□ -0.9
LINC00343-211ENST00000608426 TINF2Q9BSI4 451 aa9.44□□□□□ -0.9
LINC00343-211ENST00000608426 TRIT1Q9H3H1 467 aaKnown RBP9.44□□□□□ -0.9
LINC00343-211ENST00000608426 MKRN2Q9H000 416 aaKnown RBP9.43□□□□□ -0.9
LINC00343-211ENST00000608426 GPATCH2Q9NW75 528 aa9.43□□□□□ -0.9
LINC00343-211ENST00000608426 STRIP2Q9ULQ0 834 aa9.43□□□□□ -0.9
LINC00343-211ENST00000608426 WASH4PA8MWX3 477 aa9.42□□□□□ -0.9
LINC00343-211ENST00000608426 FUT4P22083 530 aa9.42□□□□□ -0.9
LINC00343-211ENST00000608426 ZP2Q05996 745 aa9.42□□□□□ -0.9
LINC00343-211ENST00000608426 ZYXQ15942 572 aaKnown RBP9.42□□□□□ -0.9
LINC00343-211ENST00000608426 CLEC16AQ2KHT3 1053 aa9.42□□□□□ -0.9
LINC00343-211ENST00000608426 OR6P1Q8NGX9 317 aa9.42□□□□□ -0.9
LINC00343-211ENST00000608426 ANAPC16Q96DE5 110 aa9.42□□□□□ -0.9
LINC00343-211ENST00000608426 SHDQ96IW2 340 aa9.42□□□□□ -0.9
LINC00343-211ENST00000608426 DHRS1Q96LJ7 313 aa9.42□□□□□ -0.9
LINC00343-211ENST00000608426 GPR62Q9BZJ7 368 aa9.42□□□□□ -0.9
LINC00343-211ENST00000608426 ASCC2Q9H1I8 757 aaPredicted RBP9.42□□□□□ -0.9
LINC00343-211ENST00000608426 DUSP15Q9H1R2 295 aaPredicted RBP9.42□□□□□ -0.9
LINC00343-211ENST00000608426 SSBP05455 408 aaKnown RBP eCLIP9.41□□□□□ -0.9
LINC00343-211ENST00000608426 TPP2P29144 1249 aaPredicted RBP9.41□□□□□ -0.9
LINC00343-211ENST00000608426 UNC5AQ6ZN44 842 aa9.41□□□□□ -0.9
LINC00343-211ENST00000608426 PI4K2BQ8TCG2 481 aa9.41□□□□□ -0.9
LINC00343-211ENST00000608426 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.41□□□□□ -0.9
LINC00343-211ENST00000608426 CARS2Q9HA77 564 aaKnown RBP9.41□□□□□ -0.9
LINC00343-211ENST00000608426 SUCOQ9UBS9 1254 aaKnown RBP9.41□□□□□ -0.9
LINC00343-211ENST00000608426 DNAJA1P31689 397 aaKnown RBP9.4□□□□□ -0.9
LINC00343-211ENST00000608426 ARID5AQ03989 594 aa9.4□□□□□ -0.9
LINC00343-211ENST00000608426 PPP2R5EQ16537 467 aa9.4□□□□□ -0.9
LINC00343-211ENST00000608426 TDRD10Q5VZ19 366 aaKnown RBP9.4□□□□□ -0.9
LINC00343-211ENST00000608426 PRDM7Q9NQW5 492 aa9.4□□□□□ -0.9
LINC00343-211ENST00000608426 SHISA3A0PJX4 238 aa9.39□□□□□ -0.91
LINC00343-211ENST00000608426 SRFP11831 508 aa9.39□□□□□ -0.91
LINC00343-211ENST00000608426 SNW1Q13573 536 aaKnown RBP9.39□□□□□ -0.91
LINC00343-211ENST00000608426 NBPF9Q3BBW0 867 aa9.39□□□□□ -0.91
LINC00343-211ENST00000608426 TMPRSS7Q7RTY8 843 aa9.39□□□□□ -0.91
LINC00343-211ENST00000608426 TTC6Q86TZ1 520 aa9.39□□□□□ -0.91
LINC00343-211ENST00000608426 CREG2Q8IUH2 290 aa9.39□□□□□ -0.91
LINC00343-211ENST00000608426 CCDC144CPQ8IYA2 1237 aa9.39□□□□□ -0.91
LINC00343-211ENST00000608426 FAM86C1Q9NVL1 165 aa9.39□□□□□ -0.91
LINC00343-211ENST00000608426 DUSP13Q9UII6 198 aa9.39□□□□□ -0.91
LINC00343-211ENST00000608426 MRVI1Q9Y6F6 885 aa9.39□□□□□ -0.91
LINC00343-211ENST00000608426 IRAK1P51617 712 aa9.38□□□□□ -0.91
LINC00343-211ENST00000608426 PMS1P54277 932 aaKnown RBP9.38□□□□□ -0.91
LINC00343-211ENST00000608426 NMIQ13287 307 aaPredicted RBP9.38□□□□□ -0.91
LINC00343-211ENST00000608426 ZNF792Q3KQV3 632 aa9.38□□□□□ -0.91
LINC00343-211ENST00000608426 TSPYL5Q86VY4 417 aaPredicted RBP9.38□□□□□ -0.91
LINC00343-211ENST00000608426 FBXL21Q9UKT6 434 aa9.38□□□□□ -0.91
LINC00343-211ENST00000608426 SLC12A7Q9Y666 1083 aa9.38□□□□□ -0.91
LINC00343-211ENST00000608426 C9IYK1 514 aa9.37□□□□□ -0.91
LINC00343-211ENST00000608426 LTKP29376 864 aa9.37□□□□□ -0.91
LINC00343-211ENST00000608426 ZC3H6P61129 1189 aaKnown RBP9.37□□□□□ -0.91
LINC00343-211ENST00000608426 SLC23A3Q6PIS1 610 aa9.37□□□□□ -0.91
LINC00343-211ENST00000608426 TMC3Q7Z5M5 1100 aa9.37□□□□□ -0.91
LINC00343-211ENST00000608426 FAM169BQ8N8A8 192 aa9.37□□□□□ -0.91
LINC00343-211ENST00000608426 PRDM14Q9GZV8 571 aa9.37□□□□□ -0.91
LINC00343-211ENST00000608426 LMCD1Q9NZU5 365 aa9.37□□□□□ -0.91
LINC00343-211ENST00000608426 ADGRE2Q9UHX3 823 aa9.37□□□□□ -0.91
LINC00343-211ENST00000608426 ADAMTS6Q9UKP5 1117 aa9.37□□□□□ -0.91
LINC00343-211ENST00000608426 PCDHB12Q9Y5F1 795 aa9.37□□□□□ -0.91
LINC00343-211ENST00000608426 LTBP3Q9NS15 1303 aa9.36□□□□□ -0.91
LINC00343-211ENST00000608426 A0A1W2PQH9 124 aa9.36□□□□□ -0.91
LINC00343-211ENST00000608426 ESR1P03372 595 aa9.36□□□□□ -0.91
LINC00343-211ENST00000608426 TP53P04637 393 aaPredicted RBP9.36□□□□□ -0.91
LINC00343-211ENST00000608426 PPFIBP1Q86W92 1011 aa9.36□□□□□ -0.91
LINC00343-211ENST00000608426 C19orf47Q8N9M1 422 aaKnown RBP9.36□□□□□ -0.91
LINC00343-211ENST00000608426 RC3H2Q9HBD1 1191 aaKnown RBP9.36□□□□□ -0.91
LINC00343-211ENST00000608426 MBNL3Q9NUK0 354 aaKnown RBP9.36□□□□□ -0.91
LINC00343-211ENST00000608426 RNASE1P07998 156 aaKnown RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms