RNA–Protein interactions for RNA: ENST00000606952.5

PMF1-206, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 1,275 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-206ENST00000606952 PALM3A6NDB9 673 aaPredicted RBP19.23■□□□□ 0.67
PMF1-206ENST00000606952 SMARCA1P28370 1054 aa19.23■□□□□ 0.67
PMF1-206ENST00000606952 GJB2P29033 226 aa19.23■□□□□ 0.67
PMF1-206ENST00000606952 ADD1P35611 737 aaKnown RBP19.23■□□□□ 0.67
PMF1-206ENST00000606952 GNAQP50148 359 aa19.23■□□□□ 0.67
PMF1-206ENST00000606952 PRAMEF18Q5VWM3 479 aa19.23■□□□□ 0.67
PMF1-206ENST00000606952 TMTC3Q6ZXV5 915 aa19.23■□□□□ 0.67
PMF1-206ENST00000606952 NBPF11Q86T75 865 aa19.23■□□□□ 0.67
PMF1-206ENST00000606952 RAB11FIP4Q86YS3 637 aa19.23■□□□□ 0.67
PMF1-206ENST00000606952 SCYL3Q8IZE3 742 aa19.23■□□□□ 0.67
PMF1-206ENST00000606952 SPRYD3Q8NCJ5 442 aa19.23■□□□□ 0.67
PMF1-206ENST00000606952 CTCFLQ8NI51 663 aaPredicted RBP19.23■□□□□ 0.67
PMF1-206ENST00000606952 NUP133Q8WUM0 1156 aa19.23■□□□□ 0.67
PMF1-206ENST00000606952 CLIP2Q9UDT6 1046 aa19.23■□□□□ 0.67
PMF1-206ENST00000606952 MAD2L2Q9UI95 211 aa19.23■□□□□ 0.67
PMF1-206ENST00000606952 CPLX1O14810 134 aa19.22■□□□□ 0.67
PMF1-206ENST00000606952 JAK2O60674 1132 aa19.22■□□□□ 0.67
PMF1-206ENST00000606952 USP2O75604 605 aaPredicted RBP19.22■□□□□ 0.67
PMF1-206ENST00000606952 PDHBP11177 359 aa19.22■□□□□ 0.67
PMF1-206ENST00000606952 USP48Q86UV5 1035 aa19.22■□□□□ 0.67
PMF1-206ENST00000606952 LZTS2Q9BRK4 669 aa19.22■□□□□ 0.67
PMF1-206ENST00000606952 ARHGEF10LQ9HCE6 1279 aa19.22■□□□□ 0.67
PMF1-206ENST00000606952 NMRK2Q9NPI5 230 aa19.22■□□□□ 0.67
PMF1-206ENST00000606952 FOXD4L1Q9NU39 408 aa19.22■□□□□ 0.67
PMF1-206ENST00000606952 CHMP5Q9NZZ3 219 aa19.22■□□□□ 0.67
PMF1-206ENST00000606952 FMNL1O95466 1100 aaPredicted RBP19.21■□□□□ 0.67
PMF1-206ENST00000606952 POTEIP0CG38 1075 aa19.21■□□□□ 0.67
PMF1-206ENST00000606952 POTEJP0CG39 1038 aa19.21■□□□□ 0.67
PMF1-206ENST00000606952 FDPSP14324 419 aaKnown RBP19.21■□□□□ 0.67
PMF1-206ENST00000606952 INPP5BP32019 993 aa19.21■□□□□ 0.67
PMF1-206ENST00000606952 NF2P35240 595 aa19.21■□□□□ 0.67
PMF1-206ENST00000606952 RAB3GAP1Q15042 981 aa19.21■□□□□ 0.67
PMF1-206ENST00000606952 ASPRV1Q53RT3 343 aa19.21■□□□□ 0.67
PMF1-206ENST00000606952 LRRC47Q8N1G4 583 aaKnown RBP19.21■□□□□ 0.67
PMF1-206ENST00000606952 GMCL1Q96IK5 515 aa19.21■□□□□ 0.67
PMF1-206ENST00000606952 WRNIP1Q96S55 665 aa19.21■□□□□ 0.67
PMF1-206ENST00000606952 RNF26Q9BY78 433 aaPredicted RBP19.21■□□□□ 0.67
PMF1-206ENST00000606952 GLIS2Q9BZE0 524 aaPredicted RBP19.21■□□□□ 0.67
PMF1-206ENST00000606952 SH2D4AQ9H788 454 aa19.21■□□□□ 0.67
PMF1-206ENST00000606952 KIF3AQ9Y496 699 aa19.21■□□□□ 0.67
PMF1-206ENST00000606952 CNTNAP5Q8WYK1 1306 aa19.21■□□□□ 0.67
PMF1-206ENST00000606952 TRPM7Q96QT4 1865 aa19.2■□□□□ 0.66
PMF1-206ENST00000606952 PTPRFP10586 1907 aa19.2■□□□□ 0.66
PMF1-206ENST00000606952 A0A1W2PRG0 241 aa19.2■□□□□ 0.66
PMF1-206ENST00000606952 UNCXA6NJT0 531 aa19.2■□□□□ 0.66
PMF1-206ENST00000606952 USP17L5A8MUK1 530 aa19.2■□□□□ 0.66
PMF1-206ENST00000606952 PPP1R12BO60237 982 aaPredicted RBP19.2■□□□□ 0.66
PMF1-206ENST00000606952 PDCP20941 246 aa19.2■□□□□ 0.66
PMF1-206ENST00000606952 CCDC144CPQ8IYA2 1237 aa19.2■□□□□ 0.66
PMF1-206ENST00000606952 DCAF4Q8WV16 495 aa19.2■□□□□ 0.66
PMF1-206ENST00000606952 WDR18Q9BV38 432 aa19.2■□□□□ 0.66
PMF1-206ENST00000606952 SPZ1Q9BXG8 430 aa19.2■□□□□ 0.66
PMF1-206ENST00000606952 PLEKHA8P1O95397 391 aa19.19■□□□□ 0.66
PMF1-206ENST00000606952 NUCB2P80303 420 aa19.19■□□□□ 0.66
PMF1-206ENST00000606952 ZNF543Q08ER8 600 aa19.19■□□□□ 0.66
PMF1-206ENST00000606952 GPATCH4Q5T3I0 446 aaKnown RBP19.19■□□□□ 0.66
PMF1-206ENST00000606952 RBM27Q9P2N5 1060 aaKnown RBP19.19■□□□□ 0.66
PMF1-206ENST00000606952 PRPF3O43395 683 aaKnown RBP19.18■□□□□ 0.66
PMF1-206ENST00000606952 PARP1P09874 1014 aaKnown RBP19.18■□□□□ 0.66
PMF1-206ENST00000606952 IREB2P48200 963 aaKnown RBP19.18■□□□□ 0.66
PMF1-206ENST00000606952 MAP3K9P80192 1104 aa19.18■□□□□ 0.66
PMF1-206ENST00000606952 STAG2Q8N3U4 1231 aa19.18■□□□□ 0.66
PMF1-206ENST00000606952 SRBD1Q8N5C6 995 aaKnown RBP19.18■□□□□ 0.66
PMF1-206ENST00000606952 KIAA1683Q9H0B3 1180 aa19.18■□□□□ 0.66
PMF1-206ENST00000606952 LOC285556D6RIA3 1793 aa19.17■□□□□ 0.66
PMF1-206ENST00000606952 F5H6K3 240 aa19.17■□□□□ 0.66
PMF1-206ENST00000606952 DEXIO95424 95 aa19.17■□□□□ 0.66
PMF1-206ENST00000606952 NDUFB10O96000 172 aa19.17■□□□□ 0.66
PMF1-206ENST00000606952 PTPRAP18433 802 aa19.17■□□□□ 0.66
PMF1-206ENST00000606952 FKBP1BP68106 108 aa19.17■□□□□ 0.66
PMF1-206ENST00000606952 KLRC3Q07444 240 aa19.17■□□□□ 0.66
PMF1-206ENST00000606952 SLC35G1Q2M3R5 365 aa19.17■□□□□ 0.66
PMF1-206ENST00000606952 DLK2Q6UY11 383 aa19.17■□□□□ 0.66
PMF1-206ENST00000606952 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.17■□□□□ 0.66
PMF1-206ENST00000606952 TRIM22Q8IYM9 498 aa19.17■□□□□ 0.66
PMF1-206ENST00000606952 ACER1Q8TDN7 264 aa19.17■□□□□ 0.66
PMF1-206ENST00000606952 RIOX1Q9H6W3 641 aa19.17■□□□□ 0.66
PMF1-206ENST00000606952 VCPKMTQ9H867 229 aa19.17■□□□□ 0.66
PMF1-206ENST00000606952 AS3MTQ9HBK9 375 aa19.17■□□□□ 0.66
PMF1-206ENST00000606952 ORC3Q9UBD5 711 aaPredicted RBP19.17■□□□□ 0.66
PMF1-206ENST00000606952 CLEC11AQ9Y240 323 aa19.17■□□□□ 0.66
PMF1-206ENST00000606952 SNCAIPQ9Y6H5 919 aa19.17■□□□□ 0.66
PMF1-206ENST00000606952 PARP14Q460N5 1801 aa19.16■□□□□ 0.66
PMF1-206ENST00000606952 KLRF2D3W0D1 207 aa19.16■□□□□ 0.66
PMF1-206ENST00000606952 PLA2G6O60733 806 aa19.16■□□□□ 0.66
PMF1-206ENST00000606952 BRD1O95696 1058 aa19.16■□□□□ 0.66
PMF1-206ENST00000606952 SYT1P21579 422 aa19.16■□□□□ 0.66
PMF1-206ENST00000606952 ECE1P42892 770 aa19.16■□□□□ 0.66
PMF1-206ENST00000606952 ATP2B2Q01814 1243 aa19.16■□□□□ 0.66
PMF1-206ENST00000606952 SSRP1Q08945 709 aaKnown RBP19.16■□□□□ 0.66
PMF1-206ENST00000606952 MAP1SQ66K74 1059 aaPredicted RBP19.16■□□□□ 0.66
PMF1-206ENST00000606952 SLFN13Q68D06 897 aa19.16■□□□□ 0.66
PMF1-206ENST00000606952 USP17L2Q6R6M4 530 aa19.16■□□□□ 0.66
PMF1-206ENST00000606952 RASGRP2Q7LDG7 609 aa19.16■□□□□ 0.66
PMF1-206ENST00000606952 FAM177A1Q8N128 213 aaPredicted RBP19.16■□□□□ 0.66
PMF1-206ENST00000606952 WASF1Q92558 559 aa19.16■□□□□ 0.66
PMF1-206ENST00000606952 PHKBQ93100 1093 aa19.16■□□□□ 0.66
PMF1-206ENST00000606952 GOPCQ9HD26 462 aa19.16■□□□□ 0.66
PMF1-206ENST00000606952 PICK1Q9NRD5 415 aa19.16■□□□□ 0.66
PMF1-206ENST00000606952 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms