RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 WDR18Q9BV38 432 aa9.02□□□□□ -0.97
MSH6-211ENST00000606499 KAT14Q9H8E8 782 aa9.02□□□□□ -0.97
MSH6-211ENST00000606499 AS3MTQ9HBK9 375 aa9.02□□□□□ -0.97
MSH6-211ENST00000606499 PDRG1Q9NUG6 133 aa9.02□□□□□ -0.97
MSH6-211ENST00000606499 MTMR7Q9Y216 660 aa9.02□□□□□ -0.97
MSH6-211ENST00000606499 TMX2Q9Y320 296 aa9.02□□□□□ -0.97
MSH6-211ENST00000606499 AFG3L2Q9Y4W6 797 aa9.02□□□□□ -0.97
MSH6-211ENST00000606499 A0A0G2JMZ2 1700 aa9.01□□□□□ -0.97
MSH6-211ENST00000606499 KLF18A0A0U1RQI7 1052 aa9.01□□□□□ -0.97
MSH6-211ENST00000606499 USP17L10C9JJH3 530 aa9.01□□□□□ -0.97
MSH6-211ENST00000606499 RAD21O60216 631 aa9.01□□□□□ -0.97
MSH6-211ENST00000606499 CD2BP2O95400 341 aaKnown RBP9.01□□□□□ -0.97
MSH6-211ENST00000606499 SLC10A3P09131 477 aa9.01□□□□□ -0.97
MSH6-211ENST00000606499 TOP1P11387 765 aaKnown RBP9.01□□□□□ -0.97
MSH6-211ENST00000606499 HMGCS2P54868 508 aa9.01□□□□□ -0.97
MSH6-211ENST00000606499 C1QTNF8P60827 252 aa9.01□□□□□ -0.97
MSH6-211ENST00000606499 GRM1Q13255 1194 aa9.01□□□□□ -0.97
MSH6-211ENST00000606499 CCDC178Q5BJE1 867 aa9.01□□□□□ -0.97
MSH6-211ENST00000606499 SPRYD7Q5W111 196 aa9.01□□□□□ -0.97
MSH6-211ENST00000606499 CYP4F22Q6NT55 531 aa9.01□□□□□ -0.97
MSH6-211ENST00000606499 NFXL1Q6ZNB6 911 aa9.01□□□□□ -0.97
MSH6-211ENST00000606499 PAXIP1Q6ZW49 1069 aaPredicted RBP9.01□□□□□ -0.97
MSH6-211ENST00000606499 RAB11FIP4Q86YS3 637 aa9.01□□□□□ -0.97
MSH6-211ENST00000606499 SPICE1Q8N0Z3 855 aa9.01□□□□□ -0.97
MSH6-211ENST00000606499 PNMA1Q8ND90 353 aa9.01□□□□□ -0.97
MSH6-211ENST00000606499 NUP88Q99567 741 aaPredicted RBP9.01□□□□□ -0.97
MSH6-211ENST00000606499 MTA3Q9BTC8 594 aa9.01□□□□□ -0.97
MSH6-211ENST00000606499 MYL10Q9BUA6 226 aa9.01□□□□□ -0.97
MSH6-211ENST00000606499 AGXT2Q9BYV1 514 aa9.01□□□□□ -0.97
MSH6-211ENST00000606499 KIAA1683Q9H0B3 1180 aa9.01□□□□□ -0.97
MSH6-211ENST00000606499 SH2D4AQ9H788 454 aa9.01□□□□□ -0.97
MSH6-211ENST00000606499 BRPF3Q9ULD4 1205 aa9.01□□□□□ -0.97
MSH6-211ENST00000606499 RLFQ13129 1914 aa9□□□□□ -0.97
MSH6-211ENST00000606499 CCDC69A6NI79 296 aa9□□□□□ -0.97
MSH6-211ENST00000606499 RASSF10A6NK89 507 aa9□□□□□ -0.97
MSH6-211ENST00000606499 GOLGA8BA8MQT2 603 aa9□□□□□ -0.97
MSH6-211ENST00000606499 FAM155AB1AL88 458 aaPredicted RBP9□□□□□ -0.97
MSH6-211ENST00000606499 F5H6K3 240 aa9□□□□□ -0.97
MSH6-211ENST00000606499 NDUFB10O96000 172 aa9□□□□□ -0.97
MSH6-211ENST00000606499 ZBTB48P10074 688 aaPredicted RBP9□□□□□ -0.97
MSH6-211ENST00000606499 RXRAP19793 462 aa9□□□□□ -0.97
MSH6-211ENST00000606499 LIFRP42702 1097 aa9□□□□□ -0.97
MSH6-211ENST00000606499 BACE1P56817 501 aa9□□□□□ -0.97
MSH6-211ENST00000606499 KLRC3Q07444 240 aa9□□□□□ -0.97
MSH6-211ENST00000606499 PPP4R3BQ5MIZ7 849 aa9□□□□□ -0.97
MSH6-211ENST00000606499 APOA5Q6Q788 366 aa9□□□□□ -0.97
MSH6-211ENST00000606499 SGMS1Q86VZ5 419 aa9□□□□□ -0.97
MSH6-211ENST00000606499 ZNF654Q8IZM8 581 aa9□□□□□ -0.97
MSH6-211ENST00000606499 GMCL1P1Q8NEA9 526 aa9□□□□□ -0.97
MSH6-211ENST00000606499 ANKS1AQ92625 1134 aa9□□□□□ -0.97
MSH6-211ENST00000606499 MKL1Q969V6 931 aa9□□□□□ -0.97
MSH6-211ENST00000606499 HHIPL1Q96JK4 782 aa9□□□□□ -0.97
MSH6-211ENST00000606499 TBC1D2Q9BYX2 928 aa9□□□□□ -0.97
MSH6-211ENST00000606499 VCPKMTQ9H867 229 aa9□□□□□ -0.97
MSH6-211ENST00000606499 EMILIN3Q9NT22 766 aa9□□□□□ -0.97
MSH6-211ENST00000606499 NAP1L2Q9ULW6 460 aaPredicted RBP9□□□□□ -0.97
MSH6-211ENST00000606499 KCNH4Q9UQ05 1017 aa9□□□□□ -0.97
MSH6-211ENST00000606499 COL11A1P12107 1806 aaPredicted RBP9□□□□□ -0.97
MSH6-211ENST00000606499 A0A0G2JLL6 359 aaPredicted RBP8.99□□□□□ -0.97
MSH6-211ENST00000606499 CXCL11O14625 94 aa8.99□□□□□ -0.97
MSH6-211ENST00000606499 ST18O60284 1047 aa8.99□□□□□ -0.97
MSH6-211ENST00000606499 AOC2O75106 756 aa8.99□□□□□ -0.97
MSH6-211ENST00000606499 LARGE1O95461 756 aa8.99□□□□□ -0.97
MSH6-211ENST00000606499 HSPA6P17066 643 aa8.99□□□□□ -0.97
MSH6-211ENST00000606499 VCAM1P19320 739 aa8.99□□□□□ -0.97
MSH6-211ENST00000606499 TROAPQ12815 778 aa8.99□□□□□ -0.97
MSH6-211ENST00000606499 SNAPC2Q13487 334 aa8.99□□□□□ -0.97
MSH6-211ENST00000606499 MOGSQ13724 837 aa8.99□□□□□ -0.97
MSH6-211ENST00000606499 DEFB115Q30KQ5 88 aa8.99□□□□□ -0.97
MSH6-211ENST00000606499 SH3D19Q5HYK7 790 aa8.99□□□□□ -0.97
MSH6-211ENST00000606499 TREML2Q5T2D2 321 aa8.99□□□□□ -0.97
MSH6-211ENST00000606499 SLFN13Q68D06 897 aa8.99□□□□□ -0.97
MSH6-211ENST00000606499 USP17L2Q6R6M4 530 aa8.99□□□□□ -0.97
MSH6-211ENST00000606499 GADL1Q6ZQY3 521 aa8.99□□□□□ -0.97
MSH6-211ENST00000606499 PRRT2Q7Z6L0 340 aaPredicted RBP8.99□□□□□ -0.97
MSH6-211ENST00000606499 CATIPQ7Z7H3 387 aa8.99□□□□□ -0.97
MSH6-211ENST00000606499 MICU3Q86XE3 530 aa8.99□□□□□ -0.97
MSH6-211ENST00000606499 CCDC144CPQ8IYA2 1237 aa8.99□□□□□ -0.97
MSH6-211ENST00000606499 FBXL16Q8N461 479 aa8.99□□□□□ -0.97
MSH6-211ENST00000606499 MS4A4AQ96JQ5 239 aa8.99□□□□□ -0.97
MSH6-211ENST00000606499 CAPNS2Q96L46 248 aa8.99□□□□□ -0.97
MSH6-211ENST00000606499 ALDH8A1Q9H2A2 487 aaPredicted RBP8.99□□□□□ -0.97
MSH6-211ENST00000606499 GOPCQ9HD26 462 aa8.99□□□□□ -0.97
MSH6-211ENST00000606499 TPCN1Q9ULQ1 816 aa8.99□□□□□ -0.97
MSH6-211ENST00000606499 SYNPO2Q9UMS6 1093 aa8.99□□□□□ -0.97
MSH6-211ENST00000606499 FRMPD2Q68DX3 1309 aaPredicted RBP8.99□□□□□ -0.97
MSH6-211ENST00000606499 CCL15-CCL14A0A0B4J2E2 113 aa8.98□□□□□ -0.97
MSH6-211ENST00000606499 C19orf81C9J6K1 198 aa8.98□□□□□ -0.97
MSH6-211ENST00000606499 ZBTB43O43298 467 aa8.98□□□□□ -0.97
MSH6-211ENST00000606499 GOLGA8HP0CJ92 632 aa8.98□□□□□ -0.97
MSH6-211ENST00000606499 SNHG28P0DPA3 235 aa8.98□□□□□ -0.97
MSH6-211ENST00000606499 PDHBP11177 359 aa8.98□□□□□ -0.97
MSH6-211ENST00000606499 GTF2A2P52657 109 aa8.98□□□□□ -0.97
MSH6-211ENST00000606499 USP14P54578 494 aa8.98□□□□□ -0.97
MSH6-211ENST00000606499 EVCP57679 992 aa8.98□□□□□ -0.97
MSH6-211ENST00000606499 STK3Q13188 491 aa8.98□□□□□ -0.97
MSH6-211ENST00000606499 ANKRD1Q15327 319 aa8.98□□□□□ -0.97
MSH6-211ENST00000606499 CCL15Q16663 113 aa8.98□□□□□ -0.97
MSH6-211ENST00000606499 CCDC96Q2M329 555 aa8.98□□□□□ -0.97
MSH6-211ENST00000606499 FAM83BQ5T0W9 1011 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms