RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 SMTNL1A8MU46 457 aa4.86□□□□□ -1.63
HMGB1P50-201ENST00000605814 ATP8B1O43520 1251 aa4.86□□□□□ -1.63
HMGB1P50-201ENST00000605814 NDUFB5O43674 189 aa4.86□□□□□ -1.63
HMGB1P50-201ENST00000605814 GADD45BO75293 160 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P50-201ENST00000605814 ECEL1O95672 775 aa4.86□□□□□ -1.63
HMGB1P50-201ENST00000605814 NPR3P17342 541 aa4.86□□□□□ -1.63
HMGB1P50-201ENST00000605814 U2AF2P26368 475 aaKnown RBP eCLIP4.86□□□□□ -1.63
HMGB1P50-201ENST00000605814 CYP2C19P33261 490 aa4.86□□□□□ -1.63
HMGB1P50-201ENST00000605814 NOP2P46087 812 aaKnown RBP4.86□□□□□ -1.63
HMGB1P50-201ENST00000605814 MCM2P49736 904 aa4.86□□□□□ -1.63
HMGB1P50-201ENST00000605814 BNIP3Q12983 259 aa4.86□□□□□ -1.63
HMGB1P50-201ENST00000605814 CDK5R2Q13319 367 aa4.86□□□□□ -1.63
HMGB1P50-201ENST00000605814 ZNF124Q15973 351 aa4.86□□□□□ -1.63
HMGB1P50-201ENST00000605814 CC2D1BQ5T0F9 858 aaKnown RBP4.86□□□□□ -1.63
HMGB1P50-201ENST00000605814 ZKSCAN2Q63HK3 967 aa4.86□□□□□ -1.63
HMGB1P50-201ENST00000605814 GLYCTKQ8IVS8 523 aa4.86□□□□□ -1.63
HMGB1P50-201ENST00000605814 PLD6Q8N2A8 252 aaKnown RBP4.86□□□□□ -1.63
HMGB1P50-201ENST00000605814 FAM181AQ8N9Y4 354 aa4.86□□□□□ -1.63
HMGB1P50-201ENST00000605814 KIF18AQ8NI77 898 aa4.86□□□□□ -1.63
HMGB1P50-201ENST00000605814 GCC1Q96CN9 775 aa4.86□□□□□ -1.63
HMGB1P50-201ENST00000605814 KIF1BPQ96EK5 621 aa4.86□□□□□ -1.63
HMGB1P50-201ENST00000605814 IL17RAQ96F46 866 aa4.86□□□□□ -1.63
HMGB1P50-201ENST00000605814 TCF12Q99081 682 aa4.86□□□□□ -1.63
HMGB1P50-201ENST00000605814 WDR18Q9BV38 432 aa4.86□□□□□ -1.63
HMGB1P50-201ENST00000605814 ZC3H12CQ9C0D7 883 aaKnown RBP4.86□□□□□ -1.63
HMGB1P50-201ENST00000605814 ZNF576Q9H609 170 aa4.86□□□□□ -1.63
HMGB1P50-201ENST00000605814 C1GALT1Q9NS00 363 aa4.86□□□□□ -1.63
HMGB1P50-201ENST00000605814 FEZ2Q9UHY8 353 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P50-201ENST00000605814 ANKRD36BQ8N2N9 1353 aa4.86□□□□□ -1.63
HMGB1P50-201ENST00000605814 CADPSQ9ULU8 1353 aa4.86□□□□□ -1.63
HMGB1P50-201ENST00000605814 ATP10AO60312 1499 aa4.86□□□□□ -1.63
HMGB1P50-201ENST00000605814 CCDC141Q6ZP82 1450 aa4.86□□□□□ -1.63
HMGB1P50-201ENST00000605814 MAGI2Q86UL8 1455 aa4.86□□□□□ -1.63
HMGB1P50-201ENST00000605814 DBX1A6NMT0 343 aa4.85□□□□□ -1.63
HMGB1P50-201ENST00000605814 VGLL3A8MV65 326 aa4.85□□□□□ -1.63
HMGB1P50-201ENST00000605814 DYNC1LI2O43237 492 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P50-201ENST00000605814 PRPF40AO75400 957 aaKnown RBP4.85□□□□□ -1.63
HMGB1P50-201ENST00000605814 PTMAP06454 111 aaKnown RBP4.85□□□□□ -1.63
HMGB1P50-201ENST00000605814 RLBP1P12271 317 aa4.85□□□□□ -1.63
HMGB1P50-201ENST00000605814 ID3Q02535 119 aa4.85□□□□□ -1.63
HMGB1P50-201ENST00000605814 NCBP1Q09161 790 aaKnown RBP4.85□□□□□ -1.63
HMGB1P50-201ENST00000605814 COL19A1Q14993 1142 aa4.85□□□□□ -1.63
HMGB1P50-201ENST00000605814 IFI16Q16666 785 aaKnown RBP4.85□□□□□ -1.63
HMGB1P50-201ENST00000605814 ATG4DQ86TL0 474 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P50-201ENST00000605814 RPAINQ86UA6 219 aa4.85□□□□□ -1.63
HMGB1P50-201ENST00000605814 SMYD4Q8IYR2 804 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P50-201ENST00000605814 TMEM87AQ8NBN3 555 aa4.85□□□□□ -1.63
HMGB1P50-201ENST00000605814 INTS4Q96HW7 963 aaKnown RBP4.85□□□□□ -1.63
HMGB1P50-201ENST00000605814 HRASLS5Q96KN8 279 aa4.85□□□□□ -1.63
HMGB1P50-201ENST00000605814 ARID3AQ99856 593 aa4.85□□□□□ -1.63
HMGB1P50-201ENST00000605814 TRIM56Q9BRZ2 755 aaKnown RBP4.85□□□□□ -1.63
HMGB1P50-201ENST00000605814 NPHS2Q9NP85 383 aa4.85□□□□□ -1.63
HMGB1P50-201ENST00000605814 KCND1Q9NSA2 647 aa4.85□□□□□ -1.63
HMGB1P50-201ENST00000605814 ZBTB40Q9NUA8 1239 aa4.85□□□□□ -1.63
HMGB1P50-201ENST00000605814 ZDHHC9Q9Y397 364 aa4.85□□□□□ -1.63
HMGB1P50-201ENST00000605814 ANKRD50Q9ULJ7 1429 aa4.85□□□□□ -1.63
HMGB1P50-201ENST00000605814 SHANK2Q9UPX8 1470 aa4.85□□□□□ -1.63
HMGB1P50-201ENST00000605814 PBRM1Q86U86 1689 aa4.85□□□□□ -1.63
HMGB1P50-201ENST00000605814 DNMBPQ6XZF7 1577 aa4.84□□□□□ -1.63
HMGB1P50-201ENST00000605814 SYNJ2O15056 1496 aa4.84□□□□□ -1.63
HMGB1P50-201ENST00000605814 DISP3Q9P2K9 1392 aa4.84□□□□□ -1.63
HMGB1P50-201ENST00000605814 ARID3CA6NKF2 412 aa4.84□□□□□ -1.63
HMGB1P50-201ENST00000605814 GOLGA6L6A8MZA4 724 aa4.84□□□□□ -1.63
HMGB1P50-201ENST00000605814 H3BRB1 525 aa4.84□□□□□ -1.63
HMGB1P50-201ENST00000605814 CPNE3O75131 537 aaKnown RBP4.84□□□□□ -1.63
HMGB1P50-201ENST00000605814 BRD1O95696 1058 aa4.84□□□□□ -1.63
HMGB1P50-201ENST00000605814 TUBB4AP04350 444 aa4.84□□□□□ -1.63
HMGB1P50-201ENST00000605814 CD8BP10966 210 aa4.84□□□□□ -1.63
HMGB1P50-201ENST00000605814 LIG1P18858 919 aa4.84□□□□□ -1.63
HMGB1P50-201ENST00000605814 ITIH2P19823 946 aa4.84□□□□□ -1.63
HMGB1P50-201ENST00000605814 FUT4P22083 530 aa4.84□□□□□ -1.63
HMGB1P50-201ENST00000605814 ZNF157P51786 506 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P50-201ENST00000605814 CUL4AQ13619 759 aa4.84□□□□□ -1.63
HMGB1P50-201ENST00000605814 BMS1Q14692 1282 aaKnown RBP4.84□□□□□ -1.63
HMGB1P50-201ENST00000605814 ANGEL2Q5VTE6 544 aaKnown RBP4.84□□□□□ -1.63
HMGB1P50-201ENST00000605814 SPRED2Q7Z698 418 aa4.84□□□□□ -1.63
HMGB1P50-201ENST00000605814 CHD1LQ86WJ1 897 aa4.84□□□□□ -1.63
HMGB1P50-201ENST00000605814 ZNF397Q8NF99 534 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P50-201ENST00000605814 ZNF428Q96B54 188 aa4.84□□□□□ -1.63
HMGB1P50-201ENST00000605814 RUNDC1Q96C34 613 aa4.84□□□□□ -1.63
HMGB1P50-201ENST00000605814 TUT1Q9H6E5 874 aaKnown RBP4.84□□□□□ -1.63
HMGB1P50-201ENST00000605814 GPN3Q9UHW5 284 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P50-201ENST00000605814 PPP1R9AQ9ULJ8 1098 aa4.84□□□□□ -1.63
HMGB1P50-201ENST00000605814 TCHHQ07283 1943 aa4.84□□□□□ -1.64
HMGB1P50-201ENST00000605814 WDR62O43379 1518 aa4.83□□□□□ -1.64
HMGB1P50-201ENST00000605814 ADGRL1O94910 1474 aa4.83□□□□□ -1.64
HMGB1P50-201ENST00000605814 IL16Q14005 1332 aa4.83□□□□□ -1.64
HMGB1P50-201ENST00000605814 SYCE3A1L190 88 aa4.83□□□□□ -1.64
HMGB1P50-201ENST00000605814 TMPRSS2O15393 492 aa4.83□□□□□ -1.64
HMGB1P50-201ENST00000605814 IPO8O15397 1037 aaKnown RBP4.83□□□□□ -1.64
HMGB1P50-201ENST00000605814 EPB41L2O43491 1005 aaKnown RBP4.83□□□□□ -1.64
HMGB1P50-201ENST00000605814 ADCY5O95622 1261 aa4.83□□□□□ -1.64
HMGB1P50-201ENST00000605814 GUCY2CP25092 1073 aa4.83□□□□□ -1.64
HMGB1P50-201ENST00000605814 HNRNPH2P55795 449 aaKnown RBP4.83□□□□□ -1.64
HMGB1P50-201ENST00000605814 PRKCQQ04759 706 aa4.83□□□□□ -1.64
HMGB1P50-201ENST00000605814 PPP2R3AQ06190 1150 aa4.83□□□□□ -1.64
HMGB1P50-201ENST00000605814 AOC3Q16853 763 aa4.83□□□□□ -1.64
HMGB1P50-201ENST00000605814 KIAA0319Q5VV43 1072 aa4.83□□□□□ -1.64
HMGB1P50-201ENST00000605814 USPL1Q5W0Q7 1092 aa4.83□□□□□ -1.64
HMGB1P50-201ENST00000605814 IQUBQ8NA54 791 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms