RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 KANSL2Q9H9L4 492 aa21.67■■□□□ 1.06
CCDC12-208ENST00000603885 PLXNB2O15031 1838 aa21.66■■□□□ 1.06
CCDC12-208ENST00000603885 ROBO3Q96MS0 1386 aa21.66■■□□□ 1.06
CCDC12-208ENST00000603885 CYP2B6P20813 491 aa21.66■■□□□ 1.06
CCDC12-208ENST00000603885 COG2Q14746 738 aa21.66■■□□□ 1.06
CCDC12-208ENST00000603885 PLEKHH3Q7Z736 793 aa21.66■■□□□ 1.06
CCDC12-208ENST00000603885 VCPKMTQ9H867 229 aa21.66■■□□□ 1.06
CCDC12-208ENST00000603885 EPB41L4AQ9HCS5 686 aaPredicted RBP21.66■■□□□ 1.06
CCDC12-208ENST00000603885 HOXC10Q9NYD6 342 aa21.66■■□□□ 1.06
CCDC12-208ENST00000603885 STAP2Q9UGK3 403 aa21.66■■□□□ 1.06
CCDC12-208ENST00000603885 PATL2C9JE40 543 aaKnown RBP21.65■■□□□ 1.06
CCDC12-208ENST00000603885 SGPL1O95470 568 aa21.65■■□□□ 1.06
CCDC12-208ENST00000603885 XRCC5P13010 732 aaKnown RBP21.65■■□□□ 1.06
CCDC12-208ENST00000603885 ATP2B2Q01814 1243 aa21.65■■□□□ 1.06
CCDC12-208ENST00000603885 ZMYM1Q5SVZ6 1142 aa21.65■■□□□ 1.06
CCDC12-208ENST00000603885 SEC62Q99442 399 aaKnown RBP21.65■■□□□ 1.06
CCDC12-208ENST00000603885 NACAP1Q9BZK3 213 aa21.65■■□□□ 1.06
CCDC12-208ENST00000603885 RWDD1Q9H446 243 aaPredicted RBP21.65■■□□□ 1.06
CCDC12-208ENST00000603885 MKNK2Q9HBH9 465 aa21.65■■□□□ 1.06
CCDC12-208ENST00000603885 PAK6Q9NQU5 681 aaPredicted RBP21.65■■□□□ 1.06
CCDC12-208ENST00000603885 BTBD7Q9P203 1132 aa21.65■■□□□ 1.06
CCDC12-208ENST00000603885 EEF2P13639 858 aaKnown RBP21.64■■□□□ 1.05
CCDC12-208ENST00000603885 CAPN2P17655 700 aa21.64■■□□□ 1.05
CCDC12-208ENST00000603885 RGS2P41220 211 aa21.64■■□□□ 1.05
CCDC12-208ENST00000603885 PDE1AP54750 535 aa21.64■■□□□ 1.05
CCDC12-208ENST00000603885 KIAA1755Q5JYT7 1200 aa21.64■■□□□ 1.05
CCDC12-208ENST00000603885 WDR78Q5VTH9 848 aa21.64■■□□□ 1.05
CCDC12-208ENST00000603885 TRMT44Q8IYL2 757 aaKnown RBP21.64■■□□□ 1.05
CCDC12-208ENST00000603885 IFNL3Q8IZI9 196 aa21.64■■□□□ 1.05
CCDC12-208ENST00000603885 SPICE1Q8N0Z3 855 aa21.64■■□□□ 1.05
CCDC12-208ENST00000603885 STK11IPQ8N1F8 1099 aa21.64■■□□□ 1.05
CCDC12-208ENST00000603885 TRIB2Q92519 343 aa21.64■■□□□ 1.05
CCDC12-208ENST00000603885 EVI5LQ96CN4 794 aa21.64■■□□□ 1.05
CCDC12-208ENST00000603885 DEFB118Q96PH6 123 aa21.64■■□□□ 1.05
CCDC12-208ENST00000603885 ZNF287Q9HBT7 754 aa21.64■■□□□ 1.05
CCDC12-208ENST00000603885 WDR46O15213 610 aaKnown RBP21.63■■□□□ 1.05
CCDC12-208ENST00000603885 RASA1P20936 1047 aa21.63■■□□□ 1.05
CCDC12-208ENST00000603885 MORN1Q5T089 497 aa21.63■■□□□ 1.05
CCDC12-208ENST00000603885 USP6NLQ92738 828 aa21.63■■□□□ 1.05
CCDC12-208ENST00000603885 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.63■■□□□ 1.05
CCDC12-208ENST00000603885 FLOT1O75955 427 aa21.62■■□□□ 1.05
CCDC12-208ENST00000603885 TFRCP02786 760 aaKnown RBP21.62■■□□□ 1.05
CCDC12-208ENST00000603885 ZKSCAN1P17029 563 aaPredicted RBP21.62■■□□□ 1.05
CCDC12-208ENST00000603885 MB21D1Q8N884 522 aa21.62■■□□□ 1.05
CCDC12-208ENST00000603885 APBA2Q99767 749 aa21.62■■□□□ 1.05
CCDC12-208ENST00000603885 LNPKQ9C0E8 428 aa21.62■■□□□ 1.05
CCDC12-208ENST00000603885 GOPCQ9HD26 462 aa21.62■■□□□ 1.05
CCDC12-208ENST00000603885 HMX1Q9NP08 348 aaPredicted RBP21.62■■□□□ 1.05
CCDC12-208ENST00000603885 IVNS1ABPQ9Y6Y0 642 aa21.62■■□□□ 1.05
CCDC12-208ENST00000603885 RPTORQ8N122 1335 aa21.61■■□□□ 1.05
CCDC12-208ENST00000603885 GREB1LQ9C091 1923 aaPredicted RBP21.61■■□□□ 1.05
CCDC12-208ENST00000603885 FARP2O94887 1054 aaPredicted RBP21.61■■□□□ 1.05
CCDC12-208ENST00000603885 DSG3P32926 999 aa21.61■■□□□ 1.05
CCDC12-208ENST00000603885 TRIM32Q13049 653 aa21.61■■□□□ 1.05
CCDC12-208ENST00000603885 MAP2K5Q13163 448 aa21.61■■□□□ 1.05
CCDC12-208ENST00000603885 SMC5Q8IY18 1101 aa21.61■■□□□ 1.05
CCDC12-208ENST00000603885 EXOC6Q8TAG9 804 aa21.61■■□□□ 1.05
CCDC12-208ENST00000603885 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.61■■□□□ 1.05
CCDC12-208ENST00000603885 NAPBQ9H115 298 aa21.61■■□□□ 1.05
CCDC12-208ENST00000603885 A0A0G2JMZ2 1700 aa21.6■■□□□ 1.05
CCDC12-208ENST00000603885 SLC15A5A6NIM6 579 aa21.6■■□□□ 1.05
CCDC12-208ENST00000603885 PTPREP23469 700 aa21.6■■□□□ 1.05
CCDC12-208ENST00000603885 UBE2Q1Q7Z7E8 422 aa21.6■■□□□ 1.05
CCDC12-208ENST00000603885 ZNF444Q8N0Y2 327 aaPredicted RBP21.6■■□□□ 1.05
CCDC12-208ENST00000603885 RLFQ13129 1914 aa21.6■■□□□ 1.05
CCDC12-208ENST00000603885 RAD21O60216 631 aa21.59■■□□□ 1.05
CCDC12-208ENST00000603885 SLC3A2P08195 630 aaKnown RBP21.59■■□□□ 1.05
CCDC12-208ENST00000603885 PRKAR2AP13861 404 aaKnown RBP21.59■■□□□ 1.05
CCDC12-208ENST00000603885 MAP3K21Q5TCX8 1036 aa21.59■■□□□ 1.05
CCDC12-208ENST00000603885 B4GALNT3Q6L9W6 998 aa21.59■■□□□ 1.05
CCDC12-208ENST00000603885 MOV10L1Q9BXT6 1211 aaKnown RBP21.59■■□□□ 1.05
CCDC12-208ENST00000603885 SPATC1LQ9H0A9 340 aa21.59■■□□□ 1.05
CCDC12-208ENST00000603885 CRISPLD2Q9H0B8 497 aa21.59■■□□□ 1.05
CCDC12-208ENST00000603885 NYAP2Q9P242 653 aa21.59■■□□□ 1.05
CCDC12-208ENST00000603885 PRDM1O75626 825 aa21.58■■□□□ 1.05
CCDC12-208ENST00000603885 PDE4BQ07343 736 aa21.58■■□□□ 1.05
CCDC12-208ENST00000603885 SAMD1Q6SPF0 538 aaPredicted RBP21.58■■□□□ 1.05
CCDC12-208ENST00000603885 CCDC129Q6ZRS4 1044 aa21.58■■□□□ 1.05
CCDC12-208ENST00000603885 SHCBP1Q8NEM2 672 aa21.58■■□□□ 1.05
CCDC12-208ENST00000603885 ATG4CQ96DT6 458 aa21.58■■□□□ 1.05
CCDC12-208ENST00000603885 HTATIP2Q9BUP3 242 aa21.58■■□□□ 1.05
CCDC12-208ENST00000603885 PPARAQ07869 468 aa21.57■■□□□ 1.04
CCDC12-208ENST00000603885 GRB14Q14449 540 aa21.57■■□□□ 1.04
CCDC12-208ENST00000603885 PLS1Q14651 629 aa21.57■■□□□ 1.04
CCDC12-208ENST00000603885 CCL14Q16627 93 aa21.57■■□□□ 1.04
CCDC12-208ENST00000603885 TICAM2Q86XR7 235 aa21.57■■□□□ 1.04
CCDC12-208ENST00000603885 HELLSQ9NRZ9 838 aa21.57■■□□□ 1.04
CCDC12-208ENST00000603885 PARP14Q460N5 1801 aa21.57■■□□□ 1.04
CCDC12-208ENST00000603885 IGHDP01880 384 aa21.56■■□□□ 1.04
CCDC12-208ENST00000603885 FAM83BQ5T0W9 1011 aa21.56■■□□□ 1.04
CCDC12-208ENST00000603885 CHD1LQ86WJ1 897 aa21.56■■□□□ 1.04
CCDC12-208ENST00000603885 DPF3Q92784 378 aa21.56■■□□□ 1.04
CCDC12-208ENST00000603885 SUPT16HQ9Y5B9 1047 aaKnown RBP21.56■■□□□ 1.04
CCDC12-208ENST00000603885 CEP290O15078 2479 aa21.56■■□□□ 1.04
CCDC12-208ENST00000603885 IGKV6D-41A0A0C4DH26 115 aa21.55■■□□□ 1.04
CCDC12-208ENST00000603885 TRIM6-TRIM34B2RNG4 842 aa21.55■■□□□ 1.04
CCDC12-208ENST00000603885 STRNO43815 780 aa21.55■■□□□ 1.04
CCDC12-208ENST00000603885 HOXC6P09630 235 aa21.55■■□□□ 1.04
CCDC12-208ENST00000603885 ERCC3P19447 782 aa21.55■■□□□ 1.04
CCDC12-208ENST00000603885 NUCB1Q02818 461 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms