RNA–Protein interactions for RNA: ENST00000603451.1

SQSTM1P1-201, Transcript of sequestosome 1 pseudogene 1, humanhuman

BASIC

Gene SQSTM1P1, Length 859 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1P1-201ENST00000603451 PDHXO00330 501 aa11.15□□□□□ -0.62
SQSTM1P1-201ENST00000603451 VCAM1P19320 739 aa11.15□□□□□ -0.62
SQSTM1P1-201ENST00000603451 PSMA5P28066 241 aa11.15□□□□□ -0.62
SQSTM1P1-201ENST00000603451 MCM5P33992 734 aa11.15□□□□□ -0.62
SQSTM1P1-201ENST00000603451 MKRN3Q13064 507 aaKnown RBP11.15□□□□□ -0.62
SQSTM1P1-201ENST00000603451 C8orf34Q49A92 452 aa11.15□□□□□ -0.62
SQSTM1P1-201ENST00000603451 LBX2Q6XYB7 198 aa11.15□□□□□ -0.62
SQSTM1P1-201ENST00000603451 GADL1Q6ZQY3 521 aa11.15□□□□□ -0.62
SQSTM1P1-201ENST00000603451 SIAH1Q8IUQ4 282 aa11.15□□□□□ -0.62
SQSTM1P1-201ENST00000603451 MB21D2Q8IYB1 491 aaPredicted RBP11.15□□□□□ -0.62
SQSTM1P1-201ENST00000603451 STK11IPQ8N1F8 1099 aa11.15□□□□□ -0.62
SQSTM1P1-201ENST00000603451 TMTC2Q8N394 836 aa11.15□□□□□ -0.62
SQSTM1P1-201ENST00000603451 ACER1Q8TDN7 264 aa11.15□□□□□ -0.62
SQSTM1P1-201ENST00000603451 TMEM87BQ96K49 555 aa11.15□□□□□ -0.62
SQSTM1P1-201ENST00000603451 ZSCAN10Q96SZ4 725 aaPredicted RBP11.15□□□□□ -0.62
SQSTM1P1-201ENST00000603451 PTPN18Q99952 460 aa11.15□□□□□ -0.62
SQSTM1P1-201ENST00000603451 USP26Q9BXU7 913 aa11.15□□□□□ -0.62
SQSTM1P1-201ENST00000603451 ZFYVE28Q9HCC9 887 aa11.15□□□□□ -0.62
SQSTM1P1-201ENST00000603451 IL17RBQ9NRM6 502 aa11.15□□□□□ -0.62
SQSTM1P1-201ENST00000603451 EMILIN3Q9NT22 766 aa11.15□□□□□ -0.62
SQSTM1P1-201ENST00000603451 ZSWIM5Q9P217 1185 aa11.15□□□□□ -0.62
SQSTM1P1-201ENST00000603451 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.15□□□□□ -0.62
SQSTM1P1-201ENST00000603451 STX8Q9UNK0 236 aa11.15□□□□□ -0.62
SQSTM1P1-201ENST00000603451 TACC3Q9Y6A5 838 aa11.15□□□□□ -0.62
SQSTM1P1-201ENST00000603451 RLFQ13129 1914 aa11.15□□□□□ -0.62
SQSTM1P1-201ENST00000603451 TNKSO95271 1327 aa11.14□□□□□ -0.63
SQSTM1P1-201ENST00000603451 USP17L15C9J2P7 530 aa11.14□□□□□ -0.63
SQSTM1P1-201ENST00000603451 USP17L13C9JLJ4 530 aa11.14□□□□□ -0.63
SQSTM1P1-201ENST00000603451 USP17L11C9JVI0 530 aa11.14□□□□□ -0.63
SQSTM1P1-201ENST00000603451 USP17L18D6R9N7 530 aa11.14□□□□□ -0.63
SQSTM1P1-201ENST00000603451 USP17L22D6RA61 530 aa11.14□□□□□ -0.63
SQSTM1P1-201ENST00000603451 USP17L17D6RBQ6 530 aa11.14□□□□□ -0.63
SQSTM1P1-201ENST00000603451 USP17L19D6RCP7 530 aa11.14□□□□□ -0.63
SQSTM1P1-201ENST00000603451 USP17L20D6RJB6 530 aa11.14□□□□□ -0.63
SQSTM1P1-201ENST00000603451 FDX1P10109 184 aa11.14□□□□□ -0.63
SQSTM1P1-201ENST00000603451 OSBPP22059 807 aa11.14□□□□□ -0.63
SQSTM1P1-201ENST00000603451 GCLCP48506 637 aaPredicted RBP11.14□□□□□ -0.63
SQSTM1P1-201ENST00000603451 IRX3P78415 501 aaPredicted RBP11.14□□□□□ -0.63
SQSTM1P1-201ENST00000603451 USP17L24Q0WX57 530 aa11.14□□□□□ -0.63
SQSTM1P1-201ENST00000603451 TAF1CQ15572 869 aaPredicted RBP11.14□□□□□ -0.63
SQSTM1P1-201ENST00000603451 GPAT2Q6NUI2 795 aa11.14□□□□□ -0.63
SQSTM1P1-201ENST00000603451 STOX1Q6ZVD7 989 aa11.14□□□□□ -0.63
SQSTM1P1-201ENST00000603451 CCDC84Q86UT8 332 aaPredicted RBP11.14□□□□□ -0.63
SQSTM1P1-201ENST00000603451 FAM43AQ8N2R8 423 aa11.14□□□□□ -0.63
SQSTM1P1-201ENST00000603451 FBXL16Q8N461 479 aa11.14□□□□□ -0.63
SQSTM1P1-201ENST00000603451 MB21D1Q8N884 522 aa11.14□□□□□ -0.63
SQSTM1P1-201ENST00000603451 DCAF4Q8WV16 495 aa11.14□□□□□ -0.63
SQSTM1P1-201ENST00000603451 ZIC5Q96T25 663 aa11.14□□□□□ -0.63
SQSTM1P1-201ENST00000603451 TM6SF1Q9BZW5 370 aa11.14□□□□□ -0.63
SQSTM1P1-201ENST00000603451 RNF186Q9NXI6 227 aa11.14□□□□□ -0.63
SQSTM1P1-201ENST00000603451 CLIP2Q9UDT6 1046 aa11.14□□□□□ -0.63
SQSTM1P1-201ENST00000603451 ADGRA2Q96PE1 1338 aa11.13□□□□□ -0.63
SQSTM1P1-201ENST00000603451 F5H6K3 240 aa11.13□□□□□ -0.63
SQSTM1P1-201ENST00000603451 TLR2O60603 784 aa11.13□□□□□ -0.63
SQSTM1P1-201ENST00000603451 PLA2G6O60733 806 aa11.13□□□□□ -0.63
SQSTM1P1-201ENST00000603451 LIFRP42702 1097 aa11.13□□□□□ -0.63
SQSTM1P1-201ENST00000603451 RCAN1P53805 252 aa11.13□□□□□ -0.63
SQSTM1P1-201ENST00000603451 ATP2B2Q01814 1243 aa11.13□□□□□ -0.63
SQSTM1P1-201ENST00000603451 KLRC3Q07444 240 aa11.13□□□□□ -0.63
SQSTM1P1-201ENST00000603451 SEC23AQ15436 765 aa11.13□□□□□ -0.63
SQSTM1P1-201ENST00000603451 GPATCH4Q5T3I0 446 aaKnown RBP11.13□□□□□ -0.63
SQSTM1P1-201ENST00000603451 CLEC10AQ8IUN9 316 aa11.13□□□□□ -0.63
SQSTM1P1-201ENST00000603451 ENAHQ8N8S7 591 aaPredicted RBP11.13□□□□□ -0.63
SQSTM1P1-201ENST00000603451 SMCR8Q8TEV9 937 aaPredicted RBP11.13□□□□□ -0.63
SQSTM1P1-201ENST00000603451 NEK1Q96PY6 1258 aa11.13□□□□□ -0.63
SQSTM1P1-201ENST00000603451 MAP3K14Q99558 947 aa11.13□□□□□ -0.63
SQSTM1P1-201ENST00000603451 KAT14Q9H8E8 782 aa11.13□□□□□ -0.63
SQSTM1P1-201ENST00000603451 UPF2Q9HAU5 1272 aaKnown RBP11.13□□□□□ -0.63
SQSTM1P1-201ENST00000603451 NDUFB10O96000 172 aa11.12□□□□□ -0.63
SQSTM1P1-201ENST00000603451 SNHG28P0DPA3 235 aa11.12□□□□□ -0.63
SQSTM1P1-201ENST00000603451 CTCFP49711 727 aaPredicted RBP11.12□□□□□ -0.63
SQSTM1P1-201ENST00000603451 CRHR2Q13324 411 aa11.12□□□□□ -0.63
SQSTM1P1-201ENST00000603451 WTAPQ15007 396 aa11.12□□□□□ -0.63
SQSTM1P1-201ENST00000603451 ZYXQ15942 572 aaKnown RBP11.12□□□□□ -0.63
SQSTM1P1-201ENST00000603451 FAM110CQ1W6H9 321 aa11.12□□□□□ -0.63
SQSTM1P1-201ENST00000603451 TREML2Q5T2D2 321 aa11.12□□□□□ -0.63
SQSTM1P1-201ENST00000603451 IFIT1BQ5T764 474 aaKnown RBP11.12□□□□□ -0.63
SQSTM1P1-201ENST00000603451 CATSPERGQ6ZRH7 1159 aa11.12□□□□□ -0.63
SQSTM1P1-201ENST00000603451 DHX32Q7L7V1 743 aaKnown RBP11.12□□□□□ -0.63
SQSTM1P1-201ENST00000603451 FAM160B2Q86V87 743 aa11.12□□□□□ -0.63
SQSTM1P1-201ENST00000603451 PNMA1Q8ND90 353 aa11.12□□□□□ -0.63
SQSTM1P1-201ENST00000603451 TMEM47Q9BQJ4 181 aa11.12□□□□□ -0.63
SQSTM1P1-201ENST00000603451 ASCC2Q9H1I8 757 aaPredicted RBP11.12□□□□□ -0.63
SQSTM1P1-201ENST00000603451 RPAP3Q9H6T3 665 aaPredicted RBP11.12□□□□□ -0.63
SQSTM1P1-201ENST00000603451 INCENPQ9NQS7 918 aa11.12□□□□□ -0.63
SQSTM1P1-201ENST00000603451 HOXC10Q9NYD6 342 aa11.12□□□□□ -0.63
SQSTM1P1-201ENST00000603451 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.12□□□□□ -0.63
SQSTM1P1-201ENST00000603451 SNX14Q9Y5W7 946 aa11.12□□□□□ -0.63
SQSTM1P1-201ENST00000603451 ZNF236Q9UL36 1845 aa11.12□□□□□ -0.63
SQSTM1P1-201ENST00000603451 IFIT3O14879 490 aaKnown RBP11.11□□□□□ -0.63
SQSTM1P1-201ENST00000603451 PRC1O43663 620 aa11.11□□□□□ -0.63
SQSTM1P1-201ENST00000603451 NMT2O60551 498 aa11.11□□□□□ -0.63
SQSTM1P1-201ENST00000603451 TRPA1O75762 1119 aa11.11□□□□□ -0.63
SQSTM1P1-201ENST00000603451 DDAH1O94760 285 aa11.11□□□□□ -0.63
SQSTM1P1-201ENST00000603451 HSPA1AP0DMV8 641 aaKnown RBP11.11□□□□□ -0.63
SQSTM1P1-201ENST00000603451 HSPA1BP0DMV9 641 aaKnown RBP11.11□□□□□ -0.63
SQSTM1P1-201ENST00000603451 CALM1P0DP23 149 aa11.11□□□□□ -0.63
SQSTM1P1-201ENST00000603451 CALM2P0DP24 149 aa11.11□□□□□ -0.63
SQSTM1P1-201ENST00000603451 CALM3P0DP25 149 aa11.11□□□□□ -0.63
SQSTM1P1-201ENST00000603451 BMP3P12645 472 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms