RNA–Protein interactions for RNA: ENST00000602888.5

UBE2E3-212, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 2

Gene UBE2E3, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-212ENST00000602888 PLAGL2Q9UPG8 496 aa7.59□□□□□ -1.19
UBE2E3-212ENST00000602888 TMEM265A0A087WTH1 108 aa7.58□□□□□ -1.2
UBE2E3-212ENST00000602888 A0A1W2PQH9 124 aa7.58□□□□□ -1.2
UBE2E3-212ENST00000602888 SMAD7O15105 426 aaKnown RBP7.58□□□□□ -1.2
UBE2E3-212ENST00000602888 ATP2B1P20020 1258 aa7.58□□□□□ -1.2
UBE2E3-212ENST00000602888 ETFBP38117 255 aa7.58□□□□□ -1.2
UBE2E3-212ENST00000602888 CLCN7P51798 805 aa7.58□□□□□ -1.2
UBE2E3-212ENST00000602888 PMS1P54277 932 aaKnown RBP7.58□□□□□ -1.2
UBE2E3-212ENST00000602888 TNK2Q07912 1038 aa7.58□□□□□ -1.2
UBE2E3-212ENST00000602888 LRP8Q14114 963 aa7.58□□□□□ -1.2
UBE2E3-212ENST00000602888 NBPF12Q5TAG4 269 aaPredicted RBP7.58□□□□□ -1.2
UBE2E3-212ENST00000602888 DTWD2Q8NBA8 298 aa7.58□□□□□ -1.2
UBE2E3-212ENST00000602888 VWCEQ96DN2 955 aa7.58□□□□□ -1.2
UBE2E3-212ENST00000602888 ZNF512BQ96KM6 892 aaPredicted RBP7.58□□□□□ -1.2
UBE2E3-212ENST00000602888 Q96M66 194 aa7.58□□□□□ -1.2
UBE2E3-212ENST00000602888 SCO2A0A1W2PP80 73 aa7.57□□□□□ -1.2
UBE2E3-212ENST00000602888 SPINK2P20155 84 aa7.57□□□□□ -1.2
UBE2E3-212ENST00000602888 CDKAL1Q5VV42 579 aa7.57□□□□□ -1.2
UBE2E3-212ENST00000602888 DTX1Q86Y01 620 aa7.57□□□□□ -1.2
UBE2E3-212ENST00000602888 SREK1Q8WXA9 508 aaKnown RBP7.57□□□□□ -1.2
UBE2E3-212ENST00000602888 MISP3Q96FF7 219 aa7.57□□□□□ -1.2
UBE2E3-212ENST00000602888 HRASLS5Q96KN8 279 aa7.57□□□□□ -1.2
UBE2E3-212ENST00000602888 MKRN2Q9H000 416 aaKnown RBP7.57□□□□□ -1.2
UBE2E3-212ENST00000602888 PHAXQ9H814 394 aaKnown RBP7.57□□□□□ -1.2
UBE2E3-212ENST00000602888 PCMTD2Q9NV79 361 aa7.57□□□□□ -1.2
UBE2E3-212ENST00000602888 SNX11Q9Y5W9 270 aa7.57□□□□□ -1.2
UBE2E3-212ENST00000602888 LTBP3Q9NS15 1303 aa7.56□□□□□ -1.2
UBE2E3-212ENST00000602888 RBAK-RBAKDNI3L0D1 243 aa7.56□□□□□ -1.2
UBE2E3-212ENST00000602888 LRRN2O75325 713 aa7.56□□□□□ -1.2
UBE2E3-212ENST00000602888 STK10O94804 968 aaKnown RBP7.56□□□□□ -1.2
UBE2E3-212ENST00000602888 PRNPP04156 253 aa7.56□□□□□ -1.2
UBE2E3-212ENST00000602888 BBS9Q3SYG4 887 aa7.56□□□□□ -1.2
UBE2E3-212ENST00000602888 STK11IPQ8N1F8 1099 aa7.56□□□□□ -1.2
UBE2E3-212ENST00000602888 ACTR10Q9NZ32 417 aa7.56□□□□□ -1.2
UBE2E3-212ENST00000602888 ZNF214Q9UL59 606 aaPredicted RBP7.56□□□□□ -1.2
UBE2E3-212ENST00000602888 TDRD10Q5VZ19 366 aaKnown RBP7.55□□□□□ -1.2
UBE2E3-212ENST00000602888 VSIG10LQ86VR7 867 aa7.55□□□□□ -1.2
UBE2E3-212ENST00000602888 SMARCC1Q92922 1105 aaPredicted RBP7.55□□□□□ -1.2
UBE2E3-212ENST00000602888 HSPA12BQ96MM6 686 aa7.55□□□□□ -1.2
UBE2E3-212ENST00000602888 ST14Q9Y5Y6 855 aa7.55□□□□□ -1.2
UBE2E3-212ENST00000602888 C9IYK1 514 aa7.54□□□□□ -1.2
UBE2E3-212ENST00000602888 H3BS24 57 aa7.54□□□□□ -1.2
UBE2E3-212ENST00000602888 PRKCQQ04759 706 aa7.54□□□□□ -1.2
UBE2E3-212ENST00000602888 NBPF9Q3BBW0 867 aa7.54□□□□□ -1.2
UBE2E3-212ENST00000602888 THAP5Q7Z6K1 395 aa7.54□□□□□ -1.2
UBE2E3-212ENST00000602888 PPFIBP1Q86W92 1011 aa7.54□□□□□ -1.2
UBE2E3-212ENST00000602888 CCDC144CPQ8IYA2 1237 aa7.54□□□□□ -1.2
UBE2E3-212ENST00000602888 VAV3Q9UKW4 847 aa7.54□□□□□ -1.2
UBE2E3-212ENST00000602888 ANGEL1Q9UNK9 670 aaKnown RBP7.54□□□□□ -1.2
UBE2E3-212ENST00000602888 R3HCC1Q9Y3T6 440 aaKnown RBP7.54□□□□□ -1.2
UBE2E3-212ENST00000602888 PITPNM2Q9BZ72 1349 aa7.53□□□□□ -1.2
UBE2E3-212ENST00000602888 HYAL3O43820 417 aaPredicted RBP7.53□□□□□ -1.2
UBE2E3-212ENST00000602888 GTF2F1P35269 517 aaKnown RBP eCLIP7.53□□□□□ -1.27e-7■■■■■ 27.5
UBE2E3-212ENST00000602888 SLC7A5Q01650 507 aa7.53□□□□□ -1.2
UBE2E3-212ENST00000602888 AOC3Q16853 763 aa7.53□□□□□ -1.2
UBE2E3-212ENST00000602888 GNPTABQ3T906 1256 aa7.53□□□□□ -1.2
UBE2E3-212ENST00000602888 LARP1BQ659C4 914 aaKnown RBP7.53□□□□□ -1.2
UBE2E3-212ENST00000602888 ANKS3Q6ZW76 656 aa7.53□□□□□ -1.2
UBE2E3-212ENST00000602888 BCL7CQ8WUZ0 217 aaPredicted RBP7.53□□□□□ -1.2
UBE2E3-212ENST00000602888 ASB11Q8WXH4 323 aa7.53□□□□□ -1.2
UBE2E3-212ENST00000602888 ARMC5Q96C12 935 aa7.53□□□□□ -1.2
UBE2E3-212ENST00000602888 GPR62Q9BZJ7 368 aa7.53□□□□□ -1.2
UBE2E3-212ENST00000602888 ASCC2Q9H1I8 757 aaPredicted RBP7.53□□□□□ -1.2
UBE2E3-212ENST00000602888 TRIT1Q9H3H1 467 aaKnown RBP7.53□□□□□ -1.2
UBE2E3-212ENST00000602888 FAM86C1Q9NVL1 165 aa7.53□□□□□ -1.2
UBE2E3-212ENST00000602888 GPATCH2Q9NW75 528 aa7.53□□□□□ -1.2
UBE2E3-212ENST00000602888 PPP1R1BQ9UD71 204 aaPredicted RBP7.53□□□□□ -1.2
UBE2E3-212ENST00000602888 CCDC39Q9UFE4 941 aa7.53□□□□□ -1.2
UBE2E3-212ENST00000602888 PCDHB10Q9UN67 800 aa7.53□□□□□ -1.2
UBE2E3-212ENST00000602888 SLC5A6Q9Y289 635 aa7.53□□□□□ -1.2
UBE2E3-212ENST00000602888 TP53P04637 393 aaPredicted RBP7.52□□□□□ -1.21
UBE2E3-212ENST00000602888 AUHQ13825 339 aaKnown RBP7.52□□□□□ -1.21
UBE2E3-212ENST00000602888 ARTNQ5T4W7 220 aa7.52□□□□□ -1.21
UBE2E3-212ENST00000602888 CKAP2LQ8IYA6 745 aa7.52□□□□□ -1.21
UBE2E3-212ENST00000602888 FLCNQ8NFG4 579 aa7.52□□□□□ -1.21
UBE2E3-212ENST00000602888 HNRNPLLQ8WVV9 542 aaKnown RBP7.52□□□□□ -1.21
UBE2E3-212ENST00000602888 DUSP15Q9H1R2 295 aaPredicted RBP7.52□□□□□ -1.21
UBE2E3-212ENST00000602888 SEMA3GQ9NS98 782 aa7.52□□□□□ -1.21
UBE2E3-212ENST00000602888 ZSWIM5Q9P217 1185 aa7.52□□□□□ -1.21
UBE2E3-212ENST00000602888 PCDHB12Q9Y5F1 795 aa7.52□□□□□ -1.21
UBE2E3-212ENST00000602888 SRFP11831 508 aa7.51□□□□□ -1.21
UBE2E3-212ENST00000602888 BNIP3Q12983 259 aa7.51□□□□□ -1.21
UBE2E3-212ENST00000602888 NMIQ13287 307 aaPredicted RBP7.51□□□□□ -1.21
UBE2E3-212ENST00000602888 FXNQ16595 210 aa7.51□□□□□ -1.21
UBE2E3-212ENST00000602888 AXDND1Q5T1B0 1012 aaPredicted RBP7.51□□□□□ -1.21
UBE2E3-212ENST00000602888 DCAF15Q66K64 600 aa7.51□□□□□ -1.21
UBE2E3-212ENST00000602888 VHLLQ6RSH7 139 aa7.51□□□□□ -1.21
UBE2E3-212ENST00000602888 C7orf61Q8IZ16 206 aa7.51□□□□□ -1.21
UBE2E3-212ENST00000602888 DHX38Q92620 1227 aaKnown RBP7.51□□□□□ -1.21
UBE2E3-212ENST00000602888 UBE2FQ969M7 185 aa7.51□□□□□ -1.21
UBE2E3-212ENST00000602888 HIRIP3Q9BW71 556 aaPredicted RBP7.51□□□□□ -1.21
UBE2E3-212ENST00000602888 PRDM14Q9GZV8 571 aa7.51□□□□□ -1.21
UBE2E3-212ENST00000602888 FBXL21Q9UKT6 434 aa7.51□□□□□ -1.21
UBE2E3-212ENST00000602888 KLF4O43474 513 aa7.5□□□□□ -1.21
UBE2E3-212ENST00000602888 WNT11O96014 354 aa7.5□□□□□ -1.21
UBE2E3-212ENST00000602888 SNW1Q13573 536 aaKnown RBP7.5□□□□□ -1.21
UBE2E3-212ENST00000602888 NCAPHQ15003 741 aa7.5□□□□□ -1.21
UBE2E3-212ENST00000602888 CLEC16AQ2KHT3 1053 aa7.5□□□□□ -1.21
UBE2E3-212ENST00000602888 KIAA1211LQ6NV74 962 aa7.5□□□□□ -1.21
UBE2E3-212ENST00000602888 TMC3Q7Z5M5 1100 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms