RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 IQCA1Q86XH1 822 aa16.37■□□□□ 0.21
RNF40-212ENST00000602784 PARK7Q99497 189 aaKnown RBP16.37■□□□□ 0.21
RNF40-212ENST00000602784 ZSWIM5Q9P217 1185 aa16.37■□□□□ 0.21
RNF40-212ENST00000602784 PNMA3Q9UL41 463 aa16.37■□□□□ 0.21
RNF40-212ENST00000602784 USP17L15C9J2P7 530 aa16.36■□□□□ 0.21
RNF40-212ENST00000602784 USP17L13C9JLJ4 530 aa16.36■□□□□ 0.21
RNF40-212ENST00000602784 USP17L11C9JVI0 530 aa16.36■□□□□ 0.21
RNF40-212ENST00000602784 USP17L18D6R9N7 530 aa16.36■□□□□ 0.21
RNF40-212ENST00000602784 USP17L22D6RA61 530 aa16.36■□□□□ 0.21
RNF40-212ENST00000602784 USP17L17D6RBQ6 530 aa16.36■□□□□ 0.21
RNF40-212ENST00000602784 USP17L19D6RCP7 530 aa16.36■□□□□ 0.21
RNF40-212ENST00000602784 USP17L20D6RJB6 530 aa16.36■□□□□ 0.21
RNF40-212ENST00000602784 NMT2O60551 498 aa16.36■□□□□ 0.21
RNF40-212ENST00000602784 TLR2O60603 784 aa16.36■□□□□ 0.21
RNF40-212ENST00000602784 TBC1D8O95759 1140 aa16.36■□□□□ 0.21
RNF40-212ENST00000602784 OSBPP22059 807 aa16.36■□□□□ 0.21
RNF40-212ENST00000602784 USP17L24Q0WX57 530 aa16.36■□□□□ 0.21
RNF40-212ENST00000602784 CRHR2Q13324 411 aa16.36■□□□□ 0.21
RNF40-212ENST00000602784 DGKZQ13574 1117 aa16.36■□□□□ 0.21
RNF40-212ENST00000602784 ZYXQ15942 572 aaKnown RBP16.36■□□□□ 0.21
RNF40-212ENST00000602784 DGKHQ86XP1 1220 aa16.36■□□□□ 0.21
RNF40-212ENST00000602784 GMCL1P1Q8NEA9 526 aa16.36■□□□□ 0.21
RNF40-212ENST00000602784 NCOA7Q8NI08 942 aa16.36■□□□□ 0.21
RNF40-212ENST00000602784 ANKS1AQ92625 1134 aa16.36■□□□□ 0.21
RNF40-212ENST00000602784 KCNB2Q92953 911 aa16.36■□□□□ 0.21
RNF40-212ENST00000602784 STX8Q9UNK0 236 aa16.36■□□□□ 0.21
RNF40-212ENST00000602784 TAF6LQ9Y6J9 622 aa16.36■□□□□ 0.21
RNF40-212ENST00000602784 F5H6K3 240 aa16.35■□□□□ 0.21
RNF40-212ENST00000602784 WDR46O15213 610 aaKnown RBP16.35■□□□□ 0.21
RNF40-212ENST00000602784 HSPA8P11142 646 aaKnown RBP16.35■□□□□ 0.21
RNF40-212ENST00000602784 ZKSCAN1P17029 563 aaPredicted RBP16.35■□□□□ 0.21
RNF40-212ENST00000602784 KLRC3Q07444 240 aa16.35■□□□□ 0.21
RNF40-212ENST00000602784 STOX1Q6ZVD7 989 aa16.35■□□□□ 0.21
RNF40-212ENST00000602784 RALYLQ86SE5 291 aaKnown RBP16.35■□□□□ 0.21
RNF40-212ENST00000602784 NKX2-3Q8TAU0 364 aa16.35■□□□□ 0.21
RNF40-212ENST00000602784 USP26Q9BXU7 913 aa16.35■□□□□ 0.21
RNF40-212ENST00000602784 ASCC2Q9H1I8 757 aaPredicted RBP16.35■□□□□ 0.21
RNF40-212ENST00000602784 TOP1P11387 765 aaKnown RBP16.34■□□□□ 0.21
RNF40-212ENST00000602784 HSPA4P34932 840 aa16.34■□□□□ 0.21
RNF40-212ENST00000602784 KRT32Q14532 448 aa16.34■□□□□ 0.21
RNF40-212ENST00000602784 KIAA1755Q5JYT7 1200 aa16.34■□□□□ 0.21
RNF40-212ENST00000602784 RCSD1Q6JBY9 416 aa16.34■□□□□ 0.21
RNF40-212ENST00000602784 CATSPERGQ6ZRH7 1159 aa16.34■□□□□ 0.21
RNF40-212ENST00000602784 ZSCAN10Q96SZ4 725 aaPredicted RBP16.34■□□□□ 0.21
RNF40-212ENST00000602784 MTA3Q9BTC8 594 aa16.34■□□□□ 0.21
RNF40-212ENST00000602784 R3HDMLQ9H3Y0 253 aa16.34■□□□□ 0.21
RNF40-212ENST00000602784 RPAP3Q9H6T3 665 aaPredicted RBP16.34■□□□□ 0.21
RNF40-212ENST00000602784 ADGRA2Q96PE1 1338 aa16.34■□□□□ 0.21
RNF40-212ENST00000602784 MYH4Q9Y623 1939 aa16.33■□□□□ 0.21
RNF40-212ENST00000602784 GPR25O00155 361 aa16.33■□□□□ 0.2
RNF40-212ENST00000602784 CYP2C8P10632 490 aa16.33■□□□□ 0.2
RNF40-212ENST00000602784 GCLCP48506 637 aaPredicted RBP16.33■□□□□ 0.2
RNF40-212ENST00000602784 IRX3P78415 501 aaPredicted RBP16.33■□□□□ 0.2
RNF40-212ENST00000602784 C17orf99Q6UX52 265 aa16.33■□□□□ 0.2
RNF40-212ENST00000602784 MB21D2Q8IYB1 491 aaPredicted RBP16.33■□□□□ 0.2
RNF40-212ENST00000602784 SPICE1Q8N0Z3 855 aa16.33■□□□□ 0.2
RNF40-212ENST00000602784 GTF3C2Q8WUA4 911 aaPredicted RBP16.33■□□□□ 0.2
RNF40-212ENST00000602784 GMCL1Q96IK5 515 aa16.33■□□□□ 0.2
RNF40-212ENST00000602784 TMEM47Q9BQJ4 181 aa16.33■□□□□ 0.2
RNF40-212ENST00000602784 UBAC1Q9BSL1 405 aa16.33■□□□□ 0.2
RNF40-212ENST00000602784 NDUFB10O96000 172 aa16.32■□□□□ 0.2
RNF40-212ENST00000602784 COG2Q14746 738 aa16.32■□□□□ 0.2
RNF40-212ENST00000602784 LBX2Q6XYB7 198 aa16.32■□□□□ 0.2
RNF40-212ENST00000602784 CYB5R4Q7L1T6 521 aa16.32■□□□□ 0.2
RNF40-212ENST00000602784 MYPNQ86TC9 1320 aa16.32■□□□□ 0.2
RNF40-212ENST00000602784 RASEFQ8IZ41 740 aa16.32■□□□□ 0.2
RNF40-212ENST00000602784 LRRC47Q8N1G4 583 aaKnown RBP16.32■□□□□ 0.2
RNF40-212ENST00000602784 ENAHQ8N8S7 591 aaPredicted RBP16.32■□□□□ 0.2
RNF40-212ENST00000602784 SMCR8Q8TEV9 937 aaPredicted RBP16.32■□□□□ 0.2
RNF40-212ENST00000602784 P2RX7Q99572 595 aaKnown RBP16.32■□□□□ 0.2
RNF40-212ENST00000602784 PRDM10Q9NQV6 1147 aa16.32■□□□□ 0.2
RNF40-212ENST00000602784 HOXC10Q9NYD6 342 aa16.32■□□□□ 0.2
RNF40-212ENST00000602784 TSKSQ9UJT2 592 aa16.32■□□□□ 0.2
RNF40-212ENST00000602784 TNKSO95271 1327 aa16.31■□□□□ 0.2
RNF40-212ENST00000602784 BCRP11274 1271 aa16.31■□□□□ 0.2
RNF40-212ENST00000602784 MCM5P33992 734 aa16.31■□□□□ 0.2
RNF40-212ENST00000602784 LBX1P52954 281 aa16.31■□□□□ 0.2
RNF40-212ENST00000602784 HERVK_113P62684 666 aa16.31■□□□□ 0.2
RNF40-212ENST00000602784 SART3Q15020 963 aaKnown RBP16.31■□□□□ 0.2
RNF40-212ENST00000602784 SEC23AQ15436 765 aa16.31■□□□□ 0.2
RNF40-212ENST00000602784 SLFN13Q68D06 897 aa16.31■□□□□ 0.2
RNF40-212ENST00000602784 ZKSCAN3Q9BRR0 538 aa16.31■□□□□ 0.2
RNF40-212ENST00000602784 TANGO6Q9C0B7 1094 aa16.31■□□□□ 0.2
RNF40-212ENST00000602784 RAD21O60216 631 aa16.3■□□□□ 0.2
RNF40-212ENST00000602784 FKTNO75072 461 aa16.3■□□□□ 0.2
RNF40-212ENST00000602784 HMGB1P09429 215 aaKnown RBP16.3■□□□□ 0.2
RNF40-212ENST00000602784 MCCP23508 829 aa16.3■□□□□ 0.2
RNF40-212ENST00000602784 SP3Q02447 781 aa16.3■□□□□ 0.2
RNF40-212ENST00000602784 C8orf34Q49A92 452 aa16.3■□□□□ 0.2
RNF40-212ENST00000602784 ZNF296Q8WUU4 475 aaPredicted RBP16.3■□□□□ 0.2
RNF40-212ENST00000602784 NEK1Q96PY6 1258 aa16.3■□□□□ 0.2
RNF40-212ENST00000602784 WDR19Q8NEZ3 1342 aa16.29■□□□□ 0.2
RNF40-212ENST00000602784 ERICH2A1L162 156 aa16.29■□□□□ 0.2
RNF40-212ENST00000602784 IFIT3O14879 490 aaKnown RBP16.29■□□□□ 0.2
RNF40-212ENST00000602784 PLA2G6O60733 806 aa16.29■□□□□ 0.2
RNF40-212ENST00000602784 FLOT1O75955 427 aa16.29■□□□□ 0.2
RNF40-212ENST00000602784 BMP3P12645 472 aa16.29■□□□□ 0.2
RNF40-212ENST00000602784 SLC1A4P43007 532 aa16.29■□□□□ 0.2
RNF40-212ENST00000602784 ANTXR2P58335 489 aa16.29■□□□□ 0.2
RNF40-212ENST00000602784 FAM110CQ1W6H9 321 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms