RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 GLTPD2A6NH11 291 aa20.16■□□□□ 0.82
PPFIA3-207ENST00000602716 DHX16O60231 1041 aaKnown RBP20.16■□□□□ 0.82
PPFIA3-207ENST00000602716 TOP1P11387 765 aaKnown RBP20.16■□□□□ 0.82
PPFIA3-207ENST00000602716 ZNF445P59923 1031 aa20.16■□□□□ 0.82
PPFIA3-207ENST00000602716 ATP2B2Q01814 1243 aa20.16■□□□□ 0.82
PPFIA3-207ENST00000602716 CCDC178Q5BJE1 867 aa20.16■□□□□ 0.82
PPFIA3-207ENST00000602716 OTUD7BQ6GQQ9 843 aa20.16■□□□□ 0.82
PPFIA3-207ENST00000602716 TMTC3Q6ZXV5 915 aa20.16■□□□□ 0.82
PPFIA3-207ENST00000602716 SLC26A6Q9BXS9 759 aa20.16■□□□□ 0.82
PPFIA3-207ENST00000602716 CLIP2Q9UDT6 1046 aa20.16■□□□□ 0.82
PPFIA3-207ENST00000602716 IFNAR1P17181 557 aa20.15■□□□□ 0.82
PPFIA3-207ENST00000602716 GUCY1B3Q02153 619 aa20.15■□□□□ 0.82
PPFIA3-207ENST00000602716 CCDC84Q86UT8 332 aaPredicted RBP20.15■□□□□ 0.82
PPFIA3-207ENST00000602716 APOBEC3FQ8IUX4 373 aaKnown RBP20.15■□□□□ 0.82
PPFIA3-207ENST00000602716 FAM184AQ8NB25 1140 aa20.15■□□□□ 0.82
PPFIA3-207ENST00000602716 CNTNAP5Q8WYK1 1306 aa20.15■□□□□ 0.82
PPFIA3-207ENST00000602716 ZC3H4Q9UPT8 1303 aaKnown RBP20.15■□□□□ 0.82
PPFIA3-207ENST00000602716 POTECB2RU33 542 aa20.15■□□□□ 0.82
PPFIA3-207ENST00000602716 TTLL1O95922 423 aa20.15■□□□□ 0.82
PPFIA3-207ENST00000602716 GOLGA8HP0CJ92 632 aa20.15■□□□□ 0.82
PPFIA3-207ENST00000602716 GRM4Q14833 912 aa20.15■□□□□ 0.82
PPFIA3-207ENST00000602716 DPY19L2Q6NUT2 758 aa20.15■□□□□ 0.82
PPFIA3-207ENST00000602716 TMEM179Q6ZVK1 233 aa20.15■□□□□ 0.82
PPFIA3-207ENST00000602716 SRBD1Q8N5C6 995 aaKnown RBP20.15■□□□□ 0.82
PPFIA3-207ENST00000602716 CPVLQ9H3G5 476 aa20.15■□□□□ 0.82
PPFIA3-207ENST00000602716 MAD2L2Q9UI95 211 aa20.15■□□□□ 0.82
PPFIA3-207ENST00000602716 ADM5C9JUS6 153 aa20.14■□□□□ 0.81
PPFIA3-207ENST00000602716 TBC1D12O60347 775 aa20.14■□□□□ 0.81
PPFIA3-207ENST00000602716 CALM1P0DP23 149 aa20.14■□□□□ 0.81
PPFIA3-207ENST00000602716 CALM2P0DP24 149 aa20.14■□□□□ 0.81
PPFIA3-207ENST00000602716 CALM3P0DP25 149 aa20.14■□□□□ 0.81
PPFIA3-207ENST00000602716 EEF2P13639 858 aaKnown RBP20.14■□□□□ 0.81
PPFIA3-207ENST00000602716 MAP3K10Q02779 954 aa20.14■□□□□ 0.81
PPFIA3-207ENST00000602716 ICA1Q05084 483 aa20.14■□□□□ 0.81
PPFIA3-207ENST00000602716 FOXD4L6Q3SYB3 417 aaPredicted RBP20.14■□□□□ 0.81
PPFIA3-207ENST00000602716 FOXD4L3Q6VB84 417 aaPredicted RBP20.14■□□□□ 0.81
PPFIA3-207ENST00000602716 CTCFLQ8NI51 663 aaPredicted RBP20.14■□□□□ 0.81
PPFIA3-207ENST00000602716 USP17L5A8MUK1 530 aa20.14■□□□□ 0.81
PPFIA3-207ENST00000602716 PHF20L1A8MW92 1017 aa20.14■□□□□ 0.81
PPFIA3-207ENST00000602716 FMNL1O95466 1100 aaPredicted RBP20.14■□□□□ 0.81
PPFIA3-207ENST00000602716 ZSCAN22P10073 491 aaPredicted RBP20.14■□□□□ 0.81
PPFIA3-207ENST00000602716 USP17L2Q6R6M4 530 aa20.14■□□□□ 0.81
PPFIA3-207ENST00000602716 FERMT3Q86UX7 667 aa20.14■□□□□ 0.81
PPFIA3-207ENST00000602716 ZBTB21Q9ULJ3 1066 aa20.14■□□□□ 0.81
PPFIA3-207ENST00000602716 WDR33Q9C0J8 1336 aaKnown RBP20.13■□□□□ 0.81
PPFIA3-207ENST00000602716 EPHX2P34913 555 aa20.13■□□□□ 0.81
PPFIA3-207ENST00000602716 SHISA4Q96DD7 197 aa20.13■□□□□ 0.81
PPFIA3-207ENST00000602716 ESPNB1AK53 854 aa20.12■□□□□ 0.81
PPFIA3-207ENST00000602716 CDKL5O76039 1030 aa20.12■□□□□ 0.81
PPFIA3-207ENST00000602716 NASPP49321 788 aaPredicted RBP20.12■□□□□ 0.81
PPFIA3-207ENST00000602716 ZSCAN23Q3MJ62 389 aa20.12■□□□□ 0.81
PPFIA3-207ENST00000602716 CAVIN1Q6NZI2 390 aaKnown RBP20.12■□□□□ 0.81
PPFIA3-207ENST00000602716 RBM28Q9NW13 759 aaKnown RBP20.12■□□□□ 0.81
PPFIA3-207ENST00000602716 FRMPD2Q68DX3 1309 aaPredicted RBP20.12■□□□□ 0.81
PPFIA3-207ENST00000602716 STK36Q9NRP7 1315 aa20.12■□□□□ 0.81
PPFIA3-207ENST00000602716 A0A1W2PRG0 241 aa20.12■□□□□ 0.81
PPFIA3-207ENST00000602716 F13A1P00488 732 aa20.12■□□□□ 0.81
PPFIA3-207ENST00000602716 PDHBP11177 359 aa20.12■□□□□ 0.81
PPFIA3-207ENST00000602716 CPLX2Q6PUV4 134 aaKnown RBP20.12■□□□□ 0.81
PPFIA3-207ENST00000602716 PIBF1Q8WXW3 757 aa20.12■□□□□ 0.81
PPFIA3-207ENST00000602716 CCDC196A0A1B0GTZ2 297 aa20.11■□□□□ 0.81
PPFIA3-207ENST00000602716 PRPF40AO75400 957 aaKnown RBP20.11■□□□□ 0.81
PPFIA3-207ENST00000602716 SSRP1Q08945 709 aaKnown RBP20.11■□□□□ 0.81
PPFIA3-207ENST00000602716 ACER1Q8TDN7 264 aa20.11■□□□□ 0.81
PPFIA3-207ENST00000602716 PPP1R9BQ96SB3 815 aa20.11■□□□□ 0.81
PPFIA3-207ENST00000602716 ALG1Q9BT22 464 aa20.11■□□□□ 0.81
PPFIA3-207ENST00000602716 GLIS2Q9BZE0 524 aaPredicted RBP20.11■□□□□ 0.81
PPFIA3-207ENST00000602716 KANSL2Q9H9L4 492 aa20.11■□□□□ 0.81
PPFIA3-207ENST00000602716 NYAP2Q9P242 653 aa20.11■□□□□ 0.81
PPFIA3-207ENST00000602716 PALM3A6NDB9 673 aaPredicted RBP20.1■□□□□ 0.81
PPFIA3-207ENST00000602716 CYTH3O43739 400 aa20.1■□□□□ 0.81
PPFIA3-207ENST00000602716 VEGFAP15692 232 aaPredicted RBP20.1■□□□□ 0.81
PPFIA3-207ENST00000602716 PDCP20941 246 aa20.1■□□□□ 0.81
PPFIA3-207ENST00000602716 INPP5BP32019 993 aa20.1■□□□□ 0.81
PPFIA3-207ENST00000602716 CAP2P40123 477 aa20.1■□□□□ 0.81
PPFIA3-207ENST00000602716 ECE1P42892 770 aa20.1■□□□□ 0.81
PPFIA3-207ENST00000602716 CCDC173Q0VFZ6 552 aa20.1■□□□□ 0.81
PPFIA3-207ENST00000602716 PKN1Q16512 942 aa20.1■□□□□ 0.81
PPFIA3-207ENST00000602716 GPT2Q8TD30 523 aa20.1■□□□□ 0.81
PPFIA3-207ENST00000602716 TAF1DQ9H5J8 278 aaPredicted RBP20.1■□□□□ 0.81
PPFIA3-207ENST00000602716 PITPNM2Q9BZ72 1349 aa20.1■□□□□ 0.81
PPFIA3-207ENST00000602716 POTEIP0CG38 1075 aa20.1■□□□□ 0.81
PPFIA3-207ENST00000602716 POTEJP0CG39 1038 aa20.1■□□□□ 0.81
PPFIA3-207ENST00000602716 NCLP19338 710 aaKnown RBP20.1■□□□□ 0.81
PPFIA3-207ENST00000602716 FAM173BQ6P4H8 233 aa20.1■□□□□ 0.81
PPFIA3-207ENST00000602716 TRIM44Q96DX7 344 aaPredicted RBP20.1■□□□□ 0.81
PPFIA3-207ENST00000602716 MAP3K14Q99558 947 aa20.1■□□□□ 0.81
PPFIA3-207ENST00000602716 WDR90Q96KV7 1748 aa20.1■□□□□ 0.81
PPFIA3-207ENST00000602716 MYH4Q9Y623 1939 aa20.09■□□□□ 0.81
PPFIA3-207ENST00000602716 SNHG28P0DPA3 235 aa20.09■□□□□ 0.81
PPFIA3-207ENST00000602716 CABP5Q9NP86 173 aa20.09■□□□□ 0.81
PPFIA3-207ENST00000602716 KIF5BP33176 963 aa20.09■□□□□ 0.81
PPFIA3-207ENST00000602716 PPP2R5BQ15173 497 aa20.09■□□□□ 0.81
PPFIA3-207ENST00000602716 EAPPQ56P03 285 aaPredicted RBP20.09■□□□□ 0.81
PPFIA3-207ENST00000602716 C8orf76Q96K31 380 aa20.09■□□□□ 0.81
PPFIA3-207ENST00000602716 RNF26Q9BY78 433 aaPredicted RBP20.09■□□□□ 0.81
PPFIA3-207ENST00000602716 V9GY48 417 aaPredicted RBP20.09■□□□□ 0.81
PPFIA3-207ENST00000602716 H3BQV1 296 aa20.08■□□□□ 0.8
PPFIA3-207ENST00000602716 PARP1P09874 1014 aaKnown RBP20.08■□□□□ 0.8
PPFIA3-207ENST00000602716 RESTQ13127 1097 aa20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms