RNA–Protein interactions for RNA: ENST00000602710.5

UBE2E3-209, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-209ENST00000602710 PICK1Q9NRD5 415 aa22.29■■□□□ 1.16
UBE2E3-209ENST00000602710 FOXD4L1Q9NU39 408 aa22.29■■□□□ 1.16
UBE2E3-209ENST00000602710 UBE2Q2LH0YL09 131 aa22.28■■□□□ 1.16
UBE2E3-209ENST00000602710 CELF2O95319 508 aaKnown RBP22.28■■□□□ 1.16
UBE2E3-209ENST00000602710 PTPRAP18433 802 aa22.28■■□□□ 1.16
UBE2E3-209ENST00000602710 METAP2P50579 478 aaKnown RBP eCLIP22.28■■□□□ 1.16
UBE2E3-209ENST00000602710 CUL4AQ13619 759 aa22.28■■□□□ 1.16
UBE2E3-209ENST00000602710 MAP3K11Q16584 847 aa22.28■■□□□ 1.16
UBE2E3-209ENST00000602710 ARMC9Q7Z3E5 817 aa22.28■■□□□ 1.16
UBE2E3-209ENST00000602710 CLMNQ96JQ2 1002 aa22.28■■□□□ 1.16
UBE2E3-209ENST00000602710 FAM217BQ9NTX9 383 aaPredicted RBP22.28■■□□□ 1.16
UBE2E3-209ENST00000602710 SNCAIPQ9Y6H5 919 aa22.28■■□□□ 1.16
UBE2E3-209ENST00000602710 GOLGA8AA7E2F4 631 aa22.27■■□□□ 1.16
UBE2E3-209ENST00000602710 USP17L5A8MUK1 530 aa22.27■■□□□ 1.16
UBE2E3-209ENST00000602710 DDAH1O94760 285 aa22.27■■□□□ 1.16
UBE2E3-209ENST00000602710 CDC27P30260 824 aa22.27■■□□□ 1.16
UBE2E3-209ENST00000602710 FANCBQ8NB91 859 aa22.27■■□□□ 1.16
UBE2E3-209ENST00000602710 ARHGEF10LQ9HCE6 1279 aa22.27■■□□□ 1.16
UBE2E3-209ENST00000602710 ADD1P35611 737 aaKnown RBP22.26■■□□□ 1.15
UBE2E3-209ENST00000602710 CST9Q5W186 159 aa22.26■■□□□ 1.15
UBE2E3-209ENST00000602710 ZNF784Q8NCA9 323 aaPredicted RBP22.26■■□□□ 1.15
UBE2E3-209ENST00000602710 CSADQ9Y600 493 aa22.26■■□□□ 1.15
UBE2E3-209ENST00000602710 ANKRD13AQ8IZ07 590 aa22.25■■□□□ 1.15
UBE2E3-209ENST00000602710 GBA2Q9HCG7 927 aaPredicted RBP22.25■■□□□ 1.15
UBE2E3-209ENST00000602710 DAXXQ9UER7 740 aaPredicted RBP22.25■■□□□ 1.15
UBE2E3-209ENST00000602710 TMX2Q9Y320 296 aa22.25■■□□□ 1.15
UBE2E3-209ENST00000602710 ZHX2Q9Y6X8 837 aa22.25■■□□□ 1.15
UBE2E3-209ENST00000602710 PHIPQ8WWQ0 1821 aa22.25■■□□□ 1.15
UBE2E3-209ENST00000602710 RAD21O60216 631 aa22.25■■□□□ 1.15
UBE2E3-209ENST00000602710 CALM1P0DP23 149 aa22.25■■□□□ 1.15
UBE2E3-209ENST00000602710 CALM2P0DP24 149 aa22.25■■□□□ 1.15
UBE2E3-209ENST00000602710 CALM3P0DP25 149 aa22.25■■□□□ 1.15
UBE2E3-209ENST00000602710 RCAN1P53805 252 aa22.25■■□□□ 1.15
UBE2E3-209ENST00000602710 RTN1Q16799 776 aa22.25■■□□□ 1.15
UBE2E3-209ENST00000602710 LDLRAD1Q5T700 205 aa22.25■■□□□ 1.15
UBE2E3-209ENST00000602710 CNKSR2Q8WXI2 1034 aa22.25■■□□□ 1.15
UBE2E3-209ENST00000602710 ELP3Q9H9T3 547 aa22.25■■□□□ 1.15
UBE2E3-209ENST00000602710 TRPM7Q96QT4 1865 aa22.24■■□□□ 1.15
UBE2E3-209ENST00000602710 NID2Q14112 1375 aa22.24■■□□□ 1.15
UBE2E3-209ENST00000602710 CTDNEP1O95476 244 aa22.24■■□□□ 1.15
UBE2E3-209ENST00000602710 HSP90AA1P07900 732 aaKnown RBP22.24■■□□□ 1.15
UBE2E3-209ENST00000602710 PDHBP11177 359 aa22.24■■□□□ 1.15
UBE2E3-209ENST00000602710 ZYXQ15942 572 aaKnown RBP22.24■■□□□ 1.15
UBE2E3-209ENST00000602710 KIAA1755Q5JYT7 1200 aa22.24■■□□□ 1.15
UBE2E3-209ENST00000602710 USP17L2Q6R6M4 530 aa22.24■■□□□ 1.15
UBE2E3-209ENST00000602710 F5H6K3 240 aa22.23■■□□□ 1.15
UBE2E3-209ENST00000602710 PPFIA3O75145 1194 aa22.23■■□□□ 1.15
UBE2E3-209ENST00000602710 KLRC3Q07444 240 aa22.23■■□□□ 1.15
UBE2E3-209ENST00000602710 SPP2Q13103 211 aa22.23■■□□□ 1.15
UBE2E3-209ENST00000602710 GRM4Q14833 912 aa22.23■■□□□ 1.15
UBE2E3-209ENST00000602710 CMTR1Q8N1G2 835 aaKnown RBP22.23■■□□□ 1.15
UBE2E3-209ENST00000602710 STAG2Q8N3U4 1231 aa22.23■■□□□ 1.15
UBE2E3-209ENST00000602710 SMC1BQ8NDV3 1235 aa22.23■■□□□ 1.15
UBE2E3-209ENST00000602710 CTCFLQ8NI51 663 aaPredicted RBP22.23■■□□□ 1.15
UBE2E3-209ENST00000602710 WDR18Q9BV38 432 aa22.23■■□□□ 1.15
UBE2E3-209ENST00000602710 PASKQ96RG2 1323 aa22.22■■□□□ 1.15
UBE2E3-209ENST00000602710 GOLGA8HP0CJ92 632 aa22.22■■□□□ 1.15
UBE2E3-209ENST00000602710 SLFN13Q68D06 897 aa22.22■■□□□ 1.15
UBE2E3-209ENST00000602710 C2orf69Q8N8R5 385 aa22.22■■□□□ 1.15
UBE2E3-209ENST00000602710 GMCL1P1Q8NEA9 526 aa22.22■■□□□ 1.15
UBE2E3-209ENST00000602710 MAP3K14Q99558 947 aa22.22■■□□□ 1.15
UBE2E3-209ENST00000602710 FEZ1Q99689 392 aa22.22■■□□□ 1.15
UBE2E3-209ENST00000602710 MAD2L2Q9UI95 211 aa22.22■■□□□ 1.15
UBE2E3-209ENST00000602710 FRMPD2Q68DX3 1309 aaPredicted RBP22.22■■□□□ 1.15
UBE2E3-209ENST00000602710 TOMM70O94826 608 aa22.21■■□□□ 1.15
UBE2E3-209ENST00000602710 PLEKHA8P1O95397 391 aa22.21■■□□□ 1.15
UBE2E3-209ENST00000602710 NDUFB10O96000 172 aa22.21■■□□□ 1.15
UBE2E3-209ENST00000602710 SNHG28P0DPA3 235 aa22.21■■□□□ 1.15
UBE2E3-209ENST00000602710 FKBP1BP68106 108 aa22.21■■□□□ 1.15
UBE2E3-209ENST00000602710 SPICE1Q8N0Z3 855 aa22.21■■□□□ 1.15
UBE2E3-209ENST00000602710 ZNF280CQ8ND82 737 aa22.21■■□□□ 1.15
UBE2E3-209ENST00000602710 AS3MTQ9HBK9 375 aa22.21■■□□□ 1.15
UBE2E3-209ENST00000602710 SYNPO2Q9UMS6 1093 aa22.21■■□□□ 1.15
UBE2E3-209ENST00000602710 PALM3A6NDB9 673 aaPredicted RBP22.21■■□□□ 1.15
UBE2E3-209ENST00000602710 TRIM75PA6NK02 468 aa22.21■■□□□ 1.15
UBE2E3-209ENST00000602710 CPLX1O14810 134 aa22.21■■□□□ 1.15
UBE2E3-209ENST00000602710 JAK2O60674 1132 aa22.21■■□□□ 1.15
UBE2E3-209ENST00000602710 PARP1P09874 1014 aaKnown RBP22.21■■□□□ 1.15
UBE2E3-209ENST00000602710 DGKZQ13574 1117 aa22.21■■□□□ 1.15
UBE2E3-209ENST00000602710 MTMR2Q13614 643 aa22.21■■□□□ 1.15
UBE2E3-209ENST00000602710 NTRK3Q16288 839 aa22.21■■□□□ 1.15
UBE2E3-209ENST00000602710 CCDC82Q8N4S0 544 aa22.21■■□□□ 1.15
UBE2E3-209ENST00000602710 NSUN7Q8NE18 718 aaKnown RBP22.21■■□□□ 1.15
UBE2E3-209ENST00000602710 INTS4Q96HW7 963 aaKnown RBP22.21■■□□□ 1.15
UBE2E3-209ENST00000602710 NUP88Q99567 741 aaPredicted RBP22.21■■□□□ 1.15
UBE2E3-209ENST00000602710 SH2D4AQ9H788 454 aa22.21■■□□□ 1.15
UBE2E3-209ENST00000602710 VCPKMTQ9H867 229 aa22.21■■□□□ 1.15
UBE2E3-209ENST00000602710 GOPCQ9HD26 462 aa22.21■■□□□ 1.15
UBE2E3-209ENST00000602710 AFG3L2Q9Y4W6 797 aa22.21■■□□□ 1.15
UBE2E3-209ENST00000602710 CCDC196A0A1B0GTZ2 297 aa22.2■■□□□ 1.14
UBE2E3-209ENST00000602710 USP17L10C9JJH3 530 aa22.2■■□□□ 1.14
UBE2E3-209ENST00000602710 DHX16O60231 1041 aaKnown RBP22.2■■□□□ 1.14
UBE2E3-209ENST00000602710 KIF5BP33176 963 aa22.2■■□□□ 1.14
UBE2E3-209ENST00000602710 PPP2R5BQ15173 497 aa22.2■■□□□ 1.14
UBE2E3-209ENST00000602710 KCTD1Q719H9 257 aa22.2■■□□□ 1.14
UBE2E3-209ENST00000602710 RBM46Q8TBY0 533 aaKnown RBP22.2■■□□□ 1.14
UBE2E3-209ENST00000602710 KIAA1683Q9H0B3 1180 aa22.2■■□□□ 1.14
UBE2E3-209ENST00000602710 GPCPD1Q9NPB8 672 aa22.2■■□□□ 1.14
UBE2E3-209ENST00000602710 RBM28Q9NW13 759 aaKnown RBP22.2■■□□□ 1.14
UBE2E3-209ENST00000602710 BACE1P56817 501 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms