RNA–Protein interactions for RNA: ENST00000602307.5

PTPN23-206, Transcript of protein tyrosine phosphatase, non-receptor type 23, human

TSL 2

Gene PTPN23, Length 5,119 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN23-206	ENST00000602307	IRX5	P78411	483 aa	Predicted RBP	13.44	□□□□□ -0.26
PTPN23-206	ENST00000602307	UAP1	Q16222	522 aa	Predicted RBP	13.44	□□□□□ -0.26
PTPN23-206	ENST00000602307	TPH2	Q8IWU9	490 aa		13.44	□□□□□ -0.26
PTPN23-206	ENST00000602307	KLHL7	Q8IXQ5	586 aa		13.44	□□□□□ -0.26
PTPN23-206	ENST00000602307	TBC1D22A	Q8WUA7	517 aa		13.44	□□□□□ -0.26
PTPN23-206	ENST00000602307	FRMPD2	Q68DX3	1309 aa	Predicted RBP	13.44	□□□□□ -0.26
PTPN23-206	ENST00000602307	RRAGA	Q7L523	313 aa		13.44	□□□□□ -0.26
PTPN23-206	ENST00000602307	FMNL3	Q8IVF7	1028 aa		13.44	□□□□□ -0.26
PTPN23-206	ENST00000602307	PNMA1	Q8ND90	353 aa		13.44	□□□□□ -0.26
PTPN23-206	ENST00000602307	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	13.44	□□□□□ -0.26	2e-6	■□□□□ 8.7
PTPN23-206	ENST00000602307	KIFC2	Q96AC6	838 aa		13.44	□□□□□ -0.26
PTPN23-206	ENST00000602307	MAK16	Q9BXY0	300 aa	Known RBP	13.44	□□□□□ -0.26
PTPN23-206	ENST00000602307	LSG1	Q9H089	658 aa	Known RBP	13.44	□□□□□ -0.26
PTPN23-206	ENST00000602307	COPRS	Q9NQ92	184 aa		13.44	□□□□□ -0.26
PTPN23-206	ENST00000602307	PCDHA7	Q9UN72	937 aa		13.44	□□□□□ -0.26
PTPN23-206	ENST00000602307	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	13.44	□□□□□ -0.26
PTPN23-206	ENST00000602307	PDIA3	P30101	505 aa	Known RBP	13.43	□□□□□ -0.26
PTPN23-206	ENST00000602307	SCNN1D	P51172	638 aa		13.43	□□□□□ -0.26
PTPN23-206	ENST00000602307	CHRND	Q07001	517 aa		13.43	□□□□□ -0.26
PTPN23-206	ENST00000602307	TYW1B	Q6NUM6	668 aa		13.43	□□□□□ -0.26
PTPN23-206	ENST00000602307	EEF2KMT	Q96G04	330 aa		13.43	□□□□□ -0.26
PTPN23-206	ENST00000602307	PCDHB13	Q9Y5F0	798 aa		13.43	□□□□□ -0.26
PTPN23-206	ENST00000602307	TEC	P42680	631 aa		13.43	□□□□□ -0.26
PTPN23-206	ENST00000602307	AGTPBP1	Q9UPW5	1226 aa		13.43	□□□□□ -0.26
PTPN23-206	ENST00000602307	STRN3	Q13033	797 aa		13.43	□□□□□ -0.26
PTPN23-206	ENST00000602307	TRPC3	Q13507	836 aa		13.43	□□□□□ -0.26
PTPN23-206	ENST00000602307	CEP57	Q86XR8	500 aa		13.43	□□□□□ -0.26
PTPN23-206	ENST00000602307	BLID	Q8IZY5	108 aa		13.43	□□□□□ -0.26
PTPN23-206	ENST00000602307	MAP4K1	Q92918	833 aa		13.43	□□□□□ -0.26
PTPN23-206	ENST00000602307	DESI2	Q9BSY9	194 aa		13.43	□□□□□ -0.26
PTPN23-206	ENST00000602307	SPHKAP	Q2M3C7	1700 aa		13.43	□□□□□ -0.26
PTPN23-206	ENST00000602307	NOP56	O00567	594 aa	Known RBP	13.43	□□□□□ -0.26
PTPN23-206	ENST00000602307	SCRN1	Q12765	414 aa		13.43	□□□□□ -0.26
PTPN23-206	ENST00000602307	DLGAP5	Q15398	846 aa		13.43	□□□□□ -0.26
PTPN23-206	ENST00000602307	LRRC47	Q8N1G4	583 aa	Known RBP	13.43	□□□□□ -0.26
PTPN23-206	ENST00000602307	LRRC45	Q96CN5	670 aa		13.43	□□□□□ -0.26
PTPN23-206	ENST00000602307	GDAP1L1	Q96MZ0	367 aa		13.43	□□□□□ -0.26
PTPN23-206	ENST00000602307	EFCAB6	Q5THR3	1501 aa		13.43	□□□□□ -0.26
PTPN23-206	ENST00000602307	MAP3K4	Q9Y6R4	1608 aa		13.43	□□□□□ -0.26
PTPN23-206	ENST00000602307	PDE8B	O95263	885 aa		13.42	□□□□□ -0.26
PTPN23-206	ENST00000602307	ARHGAP44	Q17R89	818 aa		13.42	□□□□□ -0.26
PTPN23-206	ENST00000602307	FAM169A	Q9Y6X4	670 aa		13.42	□□□□□ -0.26
PTPN23-206	ENST00000602307	CCDC84	Q86UT8	332 aa	Predicted RBP	13.42	□□□□□ -0.26
PTPN23-206	ENST00000602307	C2CD5	Q86YS7	1000 aa		13.42	□□□□□ -0.26
PTPN23-206	ENST00000602307	KIAA0825	Q8IV33	1275 aa		13.42	□□□□□ -0.26
PTPN23-206	ENST00000602307	SSH2	Q76I76	1423 aa		13.42	□□□□□ -0.26
PTPN23-206	ENST00000602307	KLRF2	D3W0D1	207 aa		13.42	□□□□□ -0.26
PTPN23-206	ENST00000602307	DOK7	Q18PE1	504 aa		13.42	□□□□□ -0.26
PTPN23-206	ENST00000602307	STAP2	Q9UGK3	403 aa		13.42	□□□□□ -0.26
PTPN23-206	ENST00000602307	CLIC4	Q9Y696	253 aa		13.42	□□□□□ -0.26
PTPN23-206	ENST00000602307	PPIP5K2	O43314	1243 aa		13.42	□□□□□ -0.26
PTPN23-206	ENST00000602307	ATP2A2	P16615	1042 aa	Known RBP	13.42	□□□□□ -0.26
PTPN23-206	ENST00000602307	ZNF589	Q86UQ0	364 aa	Predicted RBP	13.42	□□□□□ -0.26
PTPN23-206	ENST00000602307	NAP1L3	Q99457	506 aa	Predicted RBP	13.42	□□□□□ -0.26
PTPN23-206	ENST00000602307	UST	Q9Y2C2	406 aa		13.42	□□□□□ -0.26
PTPN23-206	ENST00000602307	APBA3	O96018	575 aa		13.41	□□□□□ -0.26
PTPN23-206	ENST00000602307	VIM	P08670	466 aa	Known RBP	13.41	□□□□□ -0.26
PTPN23-206	ENST00000602307	CYP21A2	P08686	494 aa		13.41	□□□□□ -0.26
PTPN23-206	ENST00000602307	NDUFA8	P51970	172 aa		13.41	□□□□□ -0.26
PTPN23-206	ENST00000602307	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	13.41	□□□□□ -0.26
PTPN23-206	ENST00000602307	TEKT1	Q969V4	418 aa		13.41	□□□□□ -0.26
PTPN23-206	ENST00000602307	EXOC7	Q9UPT5	735 aa		13.41	□□□□□ -0.26
PTPN23-206	ENST00000602307	ARAP3	Q8WWN8	1544 aa		13.41	□□□□□ -0.26
PTPN23-206	ENST00000602307	ERCC5	P28715	1186 aa	Predicted RBP	13.41	□□□□□ -0.26
PTPN23-206	ENST00000602307	ZNF365	Q70YC5	407 aa		13.41	□□□□□ -0.26
PTPN23-206	ENST00000602307	SMC6	Q96SB8	1091 aa		13.41	□□□□□ -0.26
PTPN23-206	ENST00000602307	FANCL	Q9NW38	375 aa		13.41	□□□□□ -0.26
PTPN23-206	ENST00000602307	SAMD15	Q9P1V8	674 aa		13.41	□□□□□ -0.26
PTPN23-206	ENST00000602307	ZMYM6	O95789	1325 aa		13.41	□□□□□ -0.26
PTPN23-206	ENST00000602307	DAAM2	Q86T65	1068 aa		13.41	□□□□□ -0.26
PTPN23-206	ENST00000602307	C10orf67	Q8IYJ2	551 aa		13.41	□□□□□ -0.26
PTPN23-206	ENST00000602307	ZBTB1	Q9Y2K1	713 aa		13.41	□□□□□ -0.26
PTPN23-206	ENST00000602307	ZBED4	O75132	1171 aa		13.41	□□□□□ -0.26
PTPN23-206	ENST00000602307	SFMBT2	Q5VUG0	894 aa		13.41	□□□□□ -0.26
PTPN23-206	ENST00000602307	MAP3K15	Q6ZN16	1313 aa		13.41	□□□□□ -0.26
PTPN23-206	ENST00000602307	ADCY9	O60503	1353 aa		13.41	□□□□□ -0.26
PTPN23-206	ENST00000602307	ACTN4	O43707	911 aa	Known RBP	13.4	□□□□□ -0.26
PTPN23-206	ENST00000602307	CMA1	P23946	247 aa		13.4	□□□□□ -0.26
PTPN23-206	ENST00000602307	USPL1	Q5W0Q7	1092 aa		13.4	□□□□□ -0.26
PTPN23-206	ENST00000602307	PI16	Q6UXB8	463 aa		13.4	□□□□□ -0.26
PTPN23-206	ENST00000602307	FBXO18	Q8NFZ0	1043 aa		13.4	□□□□□ -0.26
PTPN23-206	ENST00000602307	IFIH1	Q9BYX4	1025 aa	Known RBP	13.4	□□□□□ -0.26
PTPN23-206	ENST00000602307	MADD	Q8WXG6	1647 aa		13.4	□□□□□ -0.26
PTPN23-206	ENST00000602307	LOC102724428	A0A0B4J2F2	783 aa		13.4	□□□□□ -0.26
PTPN23-206	ENST00000602307	CD19	P15391	556 aa		13.4	□□□□□ -0.26
PTPN23-206	ENST00000602307	SIK1	P57059	783 aa		13.4	□□□□□ -0.26
PTPN23-206	ENST00000602307	PRR16	Q569H4	304 aa		13.4	□□□□□ -0.26
PTPN23-206	ENST00000602307	PPP1R21	Q6ZMI0	780 aa		13.4	□□□□□ -0.26
PTPN23-206	ENST00000602307	PYCARD	Q9ULZ3	195 aa		13.4	□□□□□ -0.26
PTPN23-206	ENST00000602307	NDC80	O14777	642 aa		13.4	□□□□□ -0.26
PTPN23-206	ENST00000602307	HGS	O14964	777 aa	Predicted RBP	13.4	□□□□□ -0.26
PTPN23-206	ENST00000602307	SCG2	P13521	617 aa		13.4	□□□□□ -0.26
PTPN23-206	ENST00000602307	RASA3	Q14644	834 aa		13.4	□□□□□ -0.26
PTPN23-206	ENST00000602307	PPM1E	Q8WY54	764 aa		13.4	□□□□□ -0.26
PTPN23-206	ENST00000602307	PSTPIP2	Q9H939	334 aa		13.4	□□□□□ -0.26
PTPN23-206	ENST00000602307	NKIRAS1	Q9NYS0	192 aa		13.4	□□□□□ -0.26
PTPN23-206	ENST00000602307	GAS7	O60861	476 aa		13.4	□□□□□ -0.26
PTPN23-206	ENST00000602307	ARHGEF25	Q86VW2	580 aa		13.4	□□□□□ -0.26
PTPN23-206	ENST00000602307	MYO1A	Q9UBC5	1043 aa		13.4	□□□□□ -0.26
PTPN23-206	ENST00000602307	PCDHA12	Q9UN75	941 aa		13.4	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms