RNA–Protein interactions for RNA: ENST00000602164.5

USF2-215, Transcript of upstream transcription factor 2, c-fos interacting, human

TSL 3

Gene USF2, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USF2-215	ENST00000602164	PPP4R2	Q9NY27	417 aa		31.84	■■■□□ 2.69
USF2-215	ENST00000602164	RLF	Q13129	1914 aa		31.83	■■■□□ 2.69
USF2-215	ENST00000602164	SGSM2	O43147	1006 aa		31.83	■■■□□ 2.69
USF2-215	ENST00000602164	TFAP4	Q01664	338 aa		31.83	■■■□□ 2.69
USF2-215	ENST00000602164	RUFY2	Q8WXA3	655 aa		31.83	■■■□□ 2.69
USF2-215	ENST00000602164	TRIM47	Q96LD4	638 aa		31.83	■■■□□ 2.69
USF2-215	ENST00000602164	MTMR4	Q9NYA4	1195 aa		31.83	■■■□□ 2.69
USF2-215	ENST00000602164	MORF4L1	Q9UBU8	362 aa		31.83	■■■□□ 2.69
USF2-215	ENST00000602164	MGAM	O43451	1857 aa		31.82	■■■□□ 2.69
USF2-215	ENST00000602164	HTT	P42858	3142 aa		31.82	■■■□□ 2.69
USF2-215	ENST00000602164	TSPY3	P0CV98	308 aa		31.82	■■■□□ 2.68
USF2-215	ENST00000602164	TSPY8	P0CW00	308 aa		31.82	■■■□□ 2.68
USF2-215	ENST00000602164	ATP2B2	Q01814	1243 aa		31.82	■■■□□ 2.68
USF2-215	ENST00000602164	FBXO46	Q6PJ61	603 aa	Predicted RBP	31.82	■■■□□ 2.68
USF2-215	ENST00000602164	MYH4	Q9Y623	1939 aa		31.81	■■■□□ 2.68
USF2-215	ENST00000602164	KIF22	Q14807	665 aa		31.81	■■■□□ 2.68
USF2-215	ENST00000602164	STAG1	Q8WVM7	1258 aa		31.81	■■■□□ 2.68
USF2-215	ENST00000602164	TXNRD2	Q9NNW7	524 aa		31.81	■■■□□ 2.68
USF2-215	ENST00000602164	PARP14	Q460N5	1801 aa		31.8	■■■□□ 2.68
USF2-215	ENST00000602164	PSMC4	P43686	418 aa		31.8	■■■□□ 2.68
USF2-215	ENST00000602164	SPICE1	Q8N0Z3	855 aa		31.8	■■■□□ 2.68
USF2-215	ENST00000602164	PTPN22	Q9Y2R2	807 aa		31.8	■■■□□ 2.68
USF2-215	ENST00000602164		A0A0G2JMZ2	1700 aa		31.8	■■■□□ 2.68
USF2-215	ENST00000602164	PEX10	O60683	326 aa		31.79	■■■□□ 2.68
USF2-215	ENST00000602164	ARHGEF6	Q15052	776 aa		31.79	■■■□□ 2.68
USF2-215	ENST00000602164	AKNAD1	Q5T1N1	836 aa		31.79	■■■□□ 2.68
USF2-215	ENST00000602164	LBX2	Q6XYB7	198 aa		31.79	■■■□□ 2.68
USF2-215	ENST00000602164	NKX2-3	Q8TAU0	364 aa		31.79	■■■□□ 2.68
USF2-215	ENST00000602164	MKL1	Q969V6	931 aa		31.79	■■■□□ 2.68
USF2-215	ENST00000602164	IL17RB	Q9NRM6	502 aa		31.79	■■■□□ 2.68
USF2-215	ENST00000602164	RBPJL	Q9UBG7	517 aa		31.79	■■■□□ 2.68
USF2-215	ENST00000602164	SPDYE16	A6NNV3	312 aa	Predicted RBP	31.78	■■■□□ 2.68
USF2-215	ENST00000602164	WDR46	O15213	610 aa	Known RBP	31.78	■■■□□ 2.68
USF2-215	ENST00000602164	ECM2	O94769	699 aa	Predicted RBP	31.78	■■■□□ 2.68
USF2-215	ENST00000602164	GNRH1	P01148	92 aa		31.78	■■■□□ 2.68
USF2-215	ENST00000602164	PC	P11498	1178 aa	Known RBP	31.78	■■■□□ 2.68
USF2-215	ENST00000602164	PTH1R	Q03431	593 aa		31.78	■■■□□ 2.68
USF2-215	ENST00000602164	GTF3C2	Q8WUA4	911 aa	Predicted RBP	31.78	■■■□□ 2.68
USF2-215	ENST00000602164	GOPC	Q9HD26	462 aa		31.78	■■■□□ 2.68
USF2-215	ENST00000602164	CLIP2	Q9UDT6	1046 aa		31.78	■■■□□ 2.68
USF2-215	ENST00000602164	SYNPO2	Q9UMS6	1093 aa		31.78	■■■□□ 2.68
USF2-215	ENST00000602164	HPS5	Q9UPZ3	1129 aa		31.78	■■■□□ 2.68
USF2-215	ENST00000602164	NEDD4	P46934	1319 aa		31.77	■■■□□ 2.68
USF2-215	ENST00000602164	TSPY2	A6NKD2	308 aa		31.77	■■■□□ 2.68
USF2-215	ENST00000602164	ZNF213	O14771	459 aa		31.77	■■■□□ 2.68
USF2-215	ENST00000602164	RANBP6	O60518	1105 aa	Known RBP	31.77	■■■□□ 2.68
USF2-215	ENST00000602164	TTLL1	O95922	423 aa		31.77	■■■□□ 2.68
USF2-215	ENST00000602164	NOV	P48745	357 aa		31.77	■■■□□ 2.68
USF2-215	ENST00000602164	NMT2	O60551	498 aa		31.76	■■■□□ 2.67
USF2-215	ENST00000602164	CNMD	O75829	334 aa		31.76	■■■□□ 2.67
USF2-215	ENST00000602164	TANGO6	Q9C0B7	1094 aa		31.76	■■■□□ 2.67
USF2-215	ENST00000602164	CTNNA3	Q9UI47	895 aa		31.76	■■■□□ 2.67
USF2-215	ENST00000602164	FCGRT	P55899	365 aa		31.75	■■■□□ 2.67
USF2-215	ENST00000602164	MFSD6	Q6ZSS7	791 aa		31.75	■■■□□ 2.67
USF2-215	ENST00000602164	RNF41	Q9H4P4	317 aa	Predicted RBP	31.75	■■■□□ 2.67
USF2-215	ENST00000602164		F5H6K3	240 aa		31.74	■■■□□ 2.67
USF2-215	ENST00000602164	FMNL1	O95466	1100 aa	Predicted RBP	31.74	■■■□□ 2.67
USF2-215	ENST00000602164	NDUFB10	O96000	172 aa		31.74	■■■□□ 2.67
USF2-215	ENST00000602164	KLRC3	Q07444	240 aa		31.74	■■■□□ 2.67
USF2-215	ENST00000602164	IMMT	Q16891	758 aa	Known RBP	31.74	■■■□□ 2.67
USF2-215	ENST00000602164	RRP12	Q5JTH9	1297 aa	Known RBP	31.74	■■■□□ 2.67
USF2-215	ENST00000602164	IFFO2	Q5TF58	517 aa		31.74	■■■□□ 2.67
USF2-215	ENST00000602164	LRRC47	Q8N1G4	583 aa	Known RBP	31.74	■■■□□ 2.67
USF2-215	ENST00000602164	TOMM22	Q9NS69	142 aa		31.74	■■■□□ 2.67
USF2-215	ENST00000602164	SRRD	Q9UH36	339 aa		31.74	■■■□□ 2.67
USF2-215	ENST00000602164	RABGAP1	Q9Y3P9	1069 aa		31.74	■■■□□ 2.67
USF2-215	ENST00000602164	ERVK-9	P63128	1117 aa		31.73	■■■□□ 2.67
USF2-215	ENST00000602164	ERVK-24	P63145	666 aa		31.73	■■■□□ 2.67
USF2-215	ENST00000602164	COG2	Q14746	738 aa		31.73	■■■□□ 2.67
USF2-215	ENST00000602164	ESYT1	Q9BSJ8	1104 aa		31.73	■■■□□ 2.67
USF2-215	ENST00000602164	PTCH2	Q9Y6C5	1203 aa		31.73	■■■□□ 2.67
USF2-215	ENST00000602164		Q3C1V9	767 aa		31.72	■■■□□ 2.67
USF2-215	ENST00000602164	FAM83B	Q5T0W9	1011 aa		31.72	■■■□□ 2.67
USF2-215	ENST00000602164	GMCL1P1	Q8NEA9	526 aa		31.72	■■■□□ 2.67
USF2-215	ENST00000602164	GPRC5A	Q8NFJ5	357 aa		31.72	■■■□□ 2.67
USF2-215	ENST00000602164	PAGR1	Q9BTK6	254 aa		31.72	■■■□□ 2.67
USF2-215	ENST00000602164	TCP11L1	Q9NUJ3	509 aa		31.72	■■■□□ 2.67
USF2-215	ENST00000602164	BTBD7	Q9P203	1132 aa		31.72	■■■□□ 2.67
USF2-215	ENST00000602164	MYPN	Q86TC9	1320 aa		31.72	■■■□□ 2.67
USF2-215	ENST00000602164	DSG3	P32926	999 aa		31.71	■■■□□ 2.67
USF2-215	ENST00000602164	PRMT2	P55345	433 aa		31.71	■■■□□ 2.67
USF2-215	ENST00000602164	PPP4R3B	Q5MIZ7	849 aa		31.71	■■■□□ 2.67
USF2-215	ENST00000602164	NUP88	Q99567	741 aa	Predicted RBP	31.71	■■■□□ 2.67
USF2-215	ENST00000602164	FLOT1	O75955	427 aa		31.7	■■■□□ 2.67
USF2-215	ENST00000602164	MAP4K1	Q92918	833 aa		31.7	■■■□□ 2.67
USF2-215	ENST00000602164	FBXO28	Q9NVF7	368 aa		31.7	■■■□□ 2.67
USF2-215	ENST00000602164	HOXC10	Q9NYD6	342 aa		31.7	■■■□□ 2.67
USF2-215	ENST00000602164		U3KPZ7	1027 aa	Predicted RBP	31.7	■■■□□ 2.67
USF2-215	ENST00000602164	TNPO2	O14787	897 aa	Known RBP	31.69	■■■□□ 2.66
USF2-215	ENST00000602164	PRKCZ	Q05513	592 aa		31.69	■■■□□ 2.66
USF2-215	ENST00000602164	ATG4C	Q96DT6	458 aa		31.69	■■■□□ 2.66
USF2-215	ENST00000602164	LSG1	Q9H089	658 aa	Known RBP	31.69	■■■□□ 2.66
USF2-215	ENST00000602164	PORCN	Q9H237	461 aa		31.69	■■■□□ 2.66
USF2-215	ENST00000602164	GABRQ	Q9UN88	632 aa		31.69	■■■□□ 2.66
USF2-215	ENST00000602164	STX8	Q9UNK0	236 aa		31.69	■■■□□ 2.66
USF2-215	ENST00000602164	RAD21	O60216	631 aa		31.68	■■■□□ 2.66
USF2-215	ENST00000602164	CYP21A2	P08686	494 aa		31.68	■■■□□ 2.66
USF2-215	ENST00000602164	HOXD10	P28358	340 aa		31.68	■■■□□ 2.66
USF2-215	ENST00000602164	NT5C2	P49902	561 aa		31.68	■■■□□ 2.66
USF2-215	ENST00000602164	ESR2	Q92731	530 aa		31.68	■■■□□ 2.66

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms