RNA–Protein interactions for RNA: ENST00000601538.5

SHANK2-218, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHANK2, Length 9,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-218ENST00000601538 SRLQ86TD4 932 aa13.44□□□□□ -0.26
SHANK2-218ENST00000601538 C3orf20Q8ND61 904 aa13.44□□□□□ -0.26
SHANK2-218ENST00000601538 CCDC8Q9H0W5 538 aaPredicted RBP13.44□□□□□ -0.26
SHANK2-218ENST00000601538 SLC12A5Q9H2X9 1139 aa13.44□□□□□ -0.26
SHANK2-218ENST00000601538 TMTC3Q6ZXV5 915 aa13.44□□□□□ -0.26
SHANK2-218ENST00000601538 NUB1Q9Y5A7 615 aa13.44□□□□□ -0.26
SHANK2-218ENST00000601538 TRAF5O00463 557 aa13.44□□□□□ -0.26
SHANK2-218ENST00000601538 CASC4Q6P4E1 433 aa13.44□□□□□ -0.26
SHANK2-218ENST00000601538 LRRC8CQ8TDW0 803 aa13.44□□□□□ -0.26
SHANK2-218ENST00000601538 TROQ12816 1431 aaPredicted RBP13.44□□□□□ -0.26
SHANK2-218ENST00000601538 TMEM232C9JQI7 657 aa13.44□□□□□ -0.26
SHANK2-218ENST00000601538 FANCCQ00597 558 aa13.44□□□□□ -0.26
SHANK2-218ENST00000601538 TMEM132EQ6IEE7 984 aa13.44□□□□□ -0.26
SHANK2-218ENST00000601538 C16orf87Q6PH81 154 aa13.44□□□□□ -0.26
SHANK2-218ENST00000601538 NOC2LQ9Y3T9 749 aaKnown RBP13.44□□□□□ -0.26
SHANK2-218ENST00000601538 RBM8AQ9Y5S9 174 aaKnown RBP13.44□□□□□ -0.26
SHANK2-218ENST00000601538 KIF20BQ96Q89 1820 aa13.44□□□□□ -0.26
SHANK2-218ENST00000601538 AMFRQ9UKV5 643 aa13.44□□□□□ -0.26
SHANK2-218ENST00000601538 DAPK3O43293 454 aa13.44□□□□□ -0.26
SHANK2-218ENST00000601538 ATICP31939 592 aa13.44□□□□□ -0.26
SHANK2-218ENST00000601538 SERPINI1Q99574 410 aa13.44□□□□□ -0.26
SHANK2-218ENST00000601538 LCA5Q86VQ0 697 aa13.43□□□□□ -0.26
SHANK2-218ENST00000601538 CCDC138Q96M89 665 aa13.43□□□□□ -0.26
SHANK2-218ENST00000601538 FNBP1Q96RU3 617 aa13.43□□□□□ -0.26
SHANK2-218ENST00000601538 SERPINI2O75830 405 aa13.43□□□□□ -0.26
SHANK2-218ENST00000601538 PLCG2P16885 1265 aa13.43□□□□□ -0.26
SHANK2-218ENST00000601538 DDX54Q8TDD1 881 aaKnown RBP13.43□□□□□ -0.26
SHANK2-218ENST00000601538 CABP1Q9NZU7 370 aa13.43□□□□□ -0.26
SHANK2-218ENST00000601538 MCF2L2Q86YR7 1114 aa13.43□□□□□ -0.26
SHANK2-218ENST00000601538 MYD88Q99836 296 aa13.43□□□□□ -0.26
SHANK2-218ENST00000601538 KCNG1Q9UIX4 513 aa13.43□□□□□ -0.26
SHANK2-218ENST00000601538 JADE1Q6IE81 842 aa13.43□□□□□ -0.26
SHANK2-218ENST00000601538 MAP7D3Q8IWC1 876 aa13.43□□□□□ -0.26
SHANK2-218ENST00000601538 OGFOD1Q8N543 542 aa13.43□□□□□ -0.26
SHANK2-218ENST00000601538 TDRD7Q8NHU6 1098 aaKnown RBP13.43□□□□□ -0.26
SHANK2-218ENST00000601538 CEP19Q96LK0 163 aa13.43□□□□□ -0.26
SHANK2-218ENST00000601538 KAT6AQ92794 2004 aa13.43□□□□□ -0.26
SHANK2-218ENST00000601538 MYH7P12883 1935 aa13.43□□□□□ -0.26
SHANK2-218ENST00000601538 HNRNPCL1O60812 293 aaKnown RBP13.43□□□□□ -0.26
SHANK2-218ENST00000601538 ANKRD7Q92527 254 aa13.43□□□□□ -0.26
SHANK2-218ENST00000601538 FAM8A1Q9UBU6 413 aa13.43□□□□□ -0.26
SHANK2-218ENST00000601538 THAP12O43422 761 aa13.42□□□□□ -0.26
SHANK2-218ENST00000601538 EPHB4P54760 987 aa13.42□□□□□ -0.26
SHANK2-218ENST00000601538 PPWD1Q96BP3 646 aaKnown RBP13.42□□□□□ -0.26
SHANK2-218ENST00000601538 VAT1LQ9HCJ6 419 aa13.42□□□□□ -0.26
SHANK2-218ENST00000601538 SFMBT2Q5VUG0 894 aa13.42□□□□□ -0.26
SHANK2-218ENST00000601538 ZNF277Q9NRM2 450 aaPredicted RBP13.42□□□□□ -0.26
SHANK2-218ENST00000601538 CTIFO43310 598 aaKnown RBP13.42□□□□□ -0.26
SHANK2-218ENST00000601538 CDR2Q01850 454 aa13.42□□□□□ -0.26
SHANK2-218ENST00000601538 ADAM21Q9UKJ8 722 aa13.42□□□□□ -0.26
SHANK2-218ENST00000601538 GOLGA4Q13439 2230 aaKnown RBP13.42□□□□□ -0.26
SHANK2-218ENST00000601538 RASSF10A6NK89 507 aa13.42□□□□□ -0.26
SHANK2-218ENST00000601538 RSAD2Q8WXG1 361 aa13.42□□□□□ -0.26
SHANK2-218ENST00000601538 POLR3CQ9BUI4 534 aaPredicted RBP13.42□□□□□ -0.26
SHANK2-218ENST00000601538 MAP3K5Q99683 1374 aa13.42□□□□□ -0.26
SHANK2-218ENST00000601538 LONP1P36776 959 aaKnown RBP13.42□□□□□ -0.26
SHANK2-218ENST00000601538 PALM2Q8IXS6 379 aa13.42□□□□□ -0.26
SHANK2-218ENST00000601538 TRIM15Q9C019 465 aa13.42□□□□□ -0.26
SHANK2-218ENST00000601538 PACSIN2Q9UNF0 486 aaPredicted RBP13.42□□□□□ -0.26
SHANK2-218ENST00000601538 MAD1L1Q9Y6D9 718 aa13.42□□□□□ -0.26
SHANK2-218ENST00000601538 PDE11AQ9HCR9 933 aa13.42□□□□□ -0.26
SHANK2-218ENST00000601538 TMOD3Q9NYL9 352 aa13.42□□□□□ -0.26
SHANK2-218ENST00000601538 IGF1RP08069 1367 aa13.42□□□□□ -0.26
SHANK2-218ENST00000601538 BRD1O95696 1058 aa13.42□□□□□ -0.26
SHANK2-218ENST00000601538 TCP1P17987 556 aaKnown RBP13.42□□□□□ -0.26
SHANK2-218ENST00000601538 EIF3BP55884 814 aaKnown RBP13.42□□□□□ -0.26
SHANK2-218ENST00000601538 OCA2Q04671 838 aa13.42□□□□□ -0.26
SHANK2-218ENST00000601538 KRT80Q6KB66 452 aa13.42□□□□□ -0.26
SHANK2-218ENST00000601538 IPO11Q9UI26 975 aaKnown RBP13.42□□□□□ -0.26
SHANK2-218ENST00000601538 CUTAO60888 179 aa13.41□□□□□ -0.26
SHANK2-218ENST00000601538 PDE1AP54750 535 aa13.41□□□□□ -0.26
SHANK2-218ENST00000601538 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.41□□□□□ -0.262e-6■■■■■ 57.2
SHANK2-218ENST00000601538 DHX32Q7L7V1 743 aaKnown RBP13.41□□□□□ -0.26
SHANK2-218ENST00000601538 TEKT1Q969V4 418 aa13.41□□□□□ -0.26
SHANK2-218ENST00000601538 PPP1R42Q7Z4L9 355 aa13.41□□□□□ -0.26
SHANK2-218ENST00000601538 NECAB1Q8N987 351 aa13.41□□□□□ -0.26
SHANK2-218ENST00000601538 USP26Q9BXU7 913 aa13.41□□□□□ -0.26
SHANK2-218ENST00000601538 HNRNPH2P55795 449 aaKnown RBP13.41□□□□□ -0.26
SHANK2-218ENST00000601538 NLRP12P59046 1061 aa13.41□□□□□ -0.26
SHANK2-218ENST00000601538 YWHAEP62258 255 aaKnown RBP13.41□□□□□ -0.26
SHANK2-218ENST00000601538 BIRC3Q13489 604 aa13.41□□□□□ -0.26
SHANK2-218ENST00000601538 NONOQ15233 471 aaKnown RBP eCLIP13.41□□□□□ -0.26
SHANK2-218ENST00000601538 CFAP70Q5T0N1 1121 aa13.41□□□□□ -0.26
SHANK2-218ENST00000601538 SCYL3Q8IZE3 742 aa13.41□□□□□ -0.26
SHANK2-218ENST00000601538 CSGALNACT2Q8N6G5 542 aa13.41□□□□□ -0.26
SHANK2-218ENST00000601538 TRIML1Q8N9V2 468 aa13.41□□□□□ -0.26
SHANK2-218ENST00000601538 MGARPQ8TDB4 240 aa13.41□□□□□ -0.26
SHANK2-218ENST00000601538 TEKT2Q9UIF3 430 aa13.41□□□□□ -0.26
SHANK2-218ENST00000601538 HAND2P61296 217 aa13.41□□□□□ -0.26
SHANK2-218ENST00000601538 MRFAP1Q9Y605 127 aa13.41□□□□□ -0.26
SHANK2-218ENST00000601538 ASPHQ12797 758 aa13.41□□□□□ -0.26
SHANK2-218ENST00000601538 DCUN1D2Q6PH85 259 aa13.41□□□□□ -0.26
SHANK2-218ENST00000601538 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.41□□□□□ -0.262e-6■□□□□ 9.4
SHANK2-218ENST00000601538 MICAL3Q7RTP6 2002 aa13.41□□□□□ -0.26
SHANK2-218ENST00000601538 TCOF1Q13428 1488 aaKnown RBP13.41□□□□□ -0.26
SHANK2-218ENST00000601538 CUL3Q13618 768 aa13.41□□□□□ -0.26
SHANK2-218ENST00000601538 KCNH3Q9ULD8 1083 aa13.41□□□□□ -0.26
SHANK2-218ENST00000601538 GABPAQ06546 454 aa13.4□□□□□ -0.26
SHANK2-218ENST00000601538 VPS37BQ9H9H4 285 aa13.4□□□□□ -0.26
SHANK2-218ENST00000601538 GARSP41250 739 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms