RNA–Protein interactions for RNA: ENST00000600778.3

SOX2-OT-233, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 762 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-233ENST00000600778 ANKRD45Q5TZF3 282 aa13.88□□□□□ -0.19
SOX2-OT-233ENST00000600778 WDR78Q5VTH9 848 aa13.88□□□□□ -0.19
SOX2-OT-233ENST00000600778 LBX2Q6XYB7 198 aa13.88□□□□□ -0.19
SOX2-OT-233ENST00000600778 EXOC6Q8TAG9 804 aa13.88□□□□□ -0.19
SOX2-OT-233ENST00000600778 PI4K2BQ8TCG2 481 aa13.88□□□□□ -0.19
SOX2-OT-233ENST00000600778 TRIB2Q92519 343 aa13.88□□□□□ -0.19
SOX2-OT-233ENST00000600778 DPF3Q92784 378 aa13.88□□□□□ -0.19
SOX2-OT-233ENST00000600778 TANGO6Q9C0B7 1094 aa13.88□□□□□ -0.19
SOX2-OT-233ENST00000600778 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.88□□□□□ -0.19
SOX2-OT-233ENST00000600778 HMX1Q9NP08 348 aaPredicted RBP13.88□□□□□ -0.19
SOX2-OT-233ENST00000600778 ZBTB47Q9UFB7 747 aaPredicted RBP13.88□□□□□ -0.19
SOX2-OT-233ENST00000600778 TMX2Q9Y320 296 aa13.88□□□□□ -0.19
SOX2-OT-233ENST00000600778 MYH8P13535 1937 aa13.88□□□□□ -0.19
SOX2-OT-233ENST00000600778 FARP2O94887 1054 aaPredicted RBP13.87□□□□□ -0.19
SOX2-OT-233ENST00000600778 RGS2P41220 211 aa13.87□□□□□ -0.19
SOX2-OT-233ENST00000600778 LRRFIP1Q32MZ4 808 aaKnown RBP13.87□□□□□ -0.19
SOX2-OT-233ENST00000600778 SBK1Q52WX2 424 aa13.87□□□□□ -0.19
SOX2-OT-233ENST00000600778 MORN1Q5T089 497 aa13.87□□□□□ -0.19
SOX2-OT-233ENST00000600778 GIMAP6Q6P9H5 292 aa13.87□□□□□ -0.19
SOX2-OT-233ENST00000600778 UBE2Q1Q7Z7E8 422 aa13.87□□□□□ -0.19
SOX2-OT-233ENST00000600778 SPICE1Q8N0Z3 855 aa13.87□□□□□ -0.19
SOX2-OT-233ENST00000600778 USP6NLQ92738 828 aa13.87□□□□□ -0.19
SOX2-OT-233ENST00000600778 GCC1Q96CN9 775 aa13.87□□□□□ -0.19
SOX2-OT-233ENST00000600778 HOXC10Q9NYD6 342 aa13.87□□□□□ -0.19
SOX2-OT-233ENST00000600778 RPTORQ8N122 1335 aa13.87□□□□□ -0.19
SOX2-OT-233ENST00000600778 SLC34A2O95436 690 aa13.86□□□□□ -0.19
SOX2-OT-233ENST00000600778 APPP05067 770 aa13.86□□□□□ -0.19
SOX2-OT-233ENST00000600778 XRCC5P13010 732 aaKnown RBP13.86□□□□□ -0.19
SOX2-OT-233ENST00000600778 EEF2P13639 858 aaKnown RBP13.86□□□□□ -0.19
SOX2-OT-233ENST00000600778 GNAT2P19087 354 aa13.86□□□□□ -0.19
SOX2-OT-233ENST00000600778 MX1P20591 662 aa13.86□□□□□ -0.19
SOX2-OT-233ENST00000600778 CCL14Q16627 93 aa13.86□□□□□ -0.19
SOX2-OT-233ENST00000600778 SAMD1Q6SPF0 538 aaPredicted RBP13.86□□□□□ -0.19
SOX2-OT-233ENST00000600778 TRMT44Q8IYL2 757 aaKnown RBP13.86□□□□□ -0.19
SOX2-OT-233ENST00000600778 SEC62Q99442 399 aaKnown RBP13.86□□□□□ -0.19
SOX2-OT-233ENST00000600778 FSD1Q9BTV5 496 aa13.86□□□□□ -0.19
SOX2-OT-233ENST00000600778 HTATIP2Q9BUP3 242 aa13.86□□□□□ -0.19
SOX2-OT-233ENST00000600778 SH2D4AQ9H788 454 aa13.86□□□□□ -0.19
SOX2-OT-233ENST00000600778 VCPKMTQ9H867 229 aa13.86□□□□□ -0.19
SOX2-OT-233ENST00000600778 MKNK2Q9HBH9 465 aa13.86□□□□□ -0.19
SOX2-OT-233ENST00000600778 PATL2C9JE40 543 aaKnown RBP13.85□□□□□ -0.19
SOX2-OT-233ENST00000600778 ZKSCAN1P17029 563 aaPredicted RBP13.85□□□□□ -0.19
SOX2-OT-233ENST00000600778 CAPN2P17655 700 aa13.85□□□□□ -0.19
SOX2-OT-233ENST00000600778 PTPREP23469 700 aa13.85□□□□□ -0.19
SOX2-OT-233ENST00000600778 DSG3P32926 999 aa13.85□□□□□ -0.19
SOX2-OT-233ENST00000600778 TDO2P48775 406 aa13.85□□□□□ -0.19
SOX2-OT-233ENST00000600778 MAP2K5Q13163 448 aa13.85□□□□□ -0.19
SOX2-OT-233ENST00000600778 HDAC1Q13547 482 aaPredicted RBP13.85□□□□□ -0.19
SOX2-OT-233ENST00000600778 LPAR1Q92633 364 aa13.85□□□□□ -0.19
SOX2-OT-233ENST00000600778 CRISPLD2Q9H0B8 497 aa13.85□□□□□ -0.19
SOX2-OT-233ENST00000600778 KANSL2Q9H9L4 492 aa13.85□□□□□ -0.19
SOX2-OT-233ENST00000600778 EPB41L4AQ9HCS5 686 aaPredicted RBP13.85□□□□□ -0.19
SOX2-OT-233ENST00000600778 H0YGN5 161 aa13.84□□□□□ -0.19
SOX2-OT-233ENST00000600778 WDR46O15213 610 aaKnown RBP13.84□□□□□ -0.19
SOX2-OT-233ENST00000600778 RAD21O60216 631 aa13.84□□□□□ -0.19
SOX2-OT-233ENST00000600778 FLOT1O75955 427 aa13.84□□□□□ -0.19
SOX2-OT-233ENST00000600778 PRKAR2AP13861 404 aaKnown RBP13.84□□□□□ -0.19
SOX2-OT-233ENST00000600778 RASA1P20936 1047 aa13.84□□□□□ -0.19
SOX2-OT-233ENST00000600778 CACNB2Q08289 660 aaPredicted RBP13.84□□□□□ -0.19
SOX2-OT-233ENST00000600778 MAP3K21Q5TCX8 1036 aa13.84□□□□□ -0.19
SOX2-OT-233ENST00000600778 IFNL3Q8IZI9 196 aa13.84□□□□□ -0.19
SOX2-OT-233ENST00000600778 PAWRQ96IZ0 340 aaKnown RBP13.84□□□□□ -0.19
SOX2-OT-233ENST00000600778 APBA2Q99767 749 aa13.84□□□□□ -0.19
SOX2-OT-233ENST00000600778 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.84□□□□□ -0.19
SOX2-OT-233ENST00000600778 MOV10L1Q9BXT6 1211 aaKnown RBP13.84□□□□□ -0.19
SOX2-OT-233ENST00000600778 IVNS1ABPQ9Y6Y0 642 aa13.84□□□□□ -0.19
SOX2-OT-233ENST00000600778 SALL3Q9BXA9 1300 aa13.84□□□□□ -0.19
SOX2-OT-233ENST00000600778 SLC15A5A6NIM6 579 aa13.83□□□□□ -0.2
SOX2-OT-233ENST00000600778 KCNA4P22459 653 aa13.83□□□□□ -0.2
SOX2-OT-233ENST00000600778 IRX6P78412 446 aaPredicted RBP13.83□□□□□ -0.2
SOX2-OT-233ENST00000600778 PLS1Q14651 629 aa13.83□□□□□ -0.2
SOX2-OT-233ENST00000600778 ZMYM1Q5SVZ6 1142 aa13.83□□□□□ -0.2
SOX2-OT-233ENST00000600778 ZNF444Q8N0Y2 327 aaPredicted RBP13.83□□□□□ -0.2
SOX2-OT-233ENST00000600778 ATG4CQ96DT6 458 aa13.83□□□□□ -0.2
SOX2-OT-233ENST00000600778 SPATC1LQ9H0A9 340 aa13.83□□□□□ -0.2
SOX2-OT-233ENST00000600778 GOPCQ9HD26 462 aa13.83□□□□□ -0.2
SOX2-OT-233ENST00000600778 PRDM1O75626 825 aa13.82□□□□□ -0.2
SOX2-OT-233ENST00000600778 CCND3P30281 292 aaPredicted RBP13.82□□□□□ -0.2
SOX2-OT-233ENST00000600778 GRB14Q14449 540 aa13.82□□□□□ -0.2
SOX2-OT-233ENST00000600778 HABP4Q5JVS0 413 aaKnown RBP13.82□□□□□ -0.2
SOX2-OT-233ENST00000600778 NECAB2Q7Z6G3 386 aa13.82□□□□□ -0.2
SOX2-OT-233ENST00000600778 MB21D1Q8N884 522 aa13.82□□□□□ -0.2
SOX2-OT-233ENST00000600778 NPLOC4Q8TAT6 608 aa13.82□□□□□ -0.2
SOX2-OT-233ENST00000600778 DIS3LQ8TF46 1054 aaKnown RBP13.82□□□□□ -0.2
SOX2-OT-233ENST00000600778 NACAP1Q9BZK3 213 aa13.82□□□□□ -0.2
SOX2-OT-233ENST00000600778 FLRT1Q9NZU1 646 aa13.82□□□□□ -0.2
SOX2-OT-233ENST00000600778 ROBO3Q96MS0 1386 aa13.82□□□□□ -0.2
SOX2-OT-233ENST00000600778 ERCC3P19447 782 aa13.81□□□□□ -0.2
SOX2-OT-233ENST00000600778 PDE1AP54750 535 aa13.81□□□□□ -0.2
SOX2-OT-233ENST00000600778 FAM83BQ5T0W9 1011 aa13.81□□□□□ -0.2
SOX2-OT-233ENST00000600778 MFSD14CQ5VZR4 134 aa13.81□□□□□ -0.2
SOX2-OT-233ENST00000600778 CCDC129Q6ZRS4 1044 aa13.81□□□□□ -0.2
SOX2-OT-233ENST00000600778 DPP9Q86TI2 863 aa13.81□□□□□ -0.2
SOX2-OT-233ENST00000600778 NCAPG2Q86XI2 1143 aa13.81□□□□□ -0.2
SOX2-OT-233ENST00000600778 ANKLE1Q8NAG6 615 aa13.81□□□□□ -0.2
SOX2-OT-233ENST00000600778 NAPBQ9H115 298 aa13.81□□□□□ -0.2
SOX2-OT-233ENST00000600778 RWDD1Q9H446 243 aaPredicted RBP13.81□□□□□ -0.2
SOX2-OT-233ENST00000600778 ZNF287Q9HBT7 754 aa13.81□□□□□ -0.2
SOX2-OT-233ENST00000600778 FBXO28Q9NVF7 368 aa13.81□□□□□ -0.2
SOX2-OT-233ENST00000600778 CLIP2Q9UDT6 1046 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms