RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-227ENST00000600026 LBX1P52954 281 aa25.82■■□□□ 1.72
LTBP4-227ENST00000600026 PROCA1Q8NCQ7 364 aaPredicted RBP25.82■■□□□ 1.72
LTBP4-227ENST00000600026 C12orf42Q96LP6 360 aa25.82■■□□□ 1.72
LTBP4-227ENST00000600026 ZKSCAN3Q9BRR0 538 aa25.82■■□□□ 1.72
LTBP4-227ENST00000600026 EMILIN3Q9NT22 766 aa25.82■■□□□ 1.72
LTBP4-227ENST00000600026 TMOD4Q9NZQ9 345 aa25.82■■□□□ 1.72
LTBP4-227ENST00000600026 ZSWIM5Q9P217 1185 aa25.82■■□□□ 1.72
LTBP4-227ENST00000600026 CLIP2Q9UDT6 1046 aa25.82■■□□□ 1.72
LTBP4-227ENST00000600026 CYP46A1Q9Y6A2 500 aa25.82■■□□□ 1.72
LTBP4-227ENST00000600026 NOVP48745 357 aa25.81■■□□□ 1.72
LTBP4-227ENST00000600026 USP14P54578 494 aa25.81■■□□□ 1.72
LTBP4-227ENST00000600026 MAP2K1Q02750 393 aaPredicted RBP25.81■■□□□ 1.72
LTBP4-227ENST00000600026 RABEP1Q15276 862 aa25.81■■□□□ 1.72
LTBP4-227ENST00000600026 PPP4R3BQ5MIZ7 849 aa25.81■■□□□ 1.72
LTBP4-227ENST00000600026 GPAT2Q6NUI2 795 aa25.81■■□□□ 1.72
LTBP4-227ENST00000600026 CYB5R4Q7L1T6 521 aa25.81■■□□□ 1.72
LTBP4-227ENST00000600026 MB21D2Q8IYB1 491 aaPredicted RBP25.81■■□□□ 1.72
LTBP4-227ENST00000600026 FAM43AQ8N2R8 423 aa25.81■■□□□ 1.72
LTBP4-227ENST00000600026 STX8Q9UNK0 236 aa25.81■■□□□ 1.72
LTBP4-227ENST00000600026 MCM5P33992 734 aa25.8■■□□□ 1.72
LTBP4-227ENST00000600026 CTCFP49711 727 aaPredicted RBP25.8■■□□□ 1.72
LTBP4-227ENST00000600026 TREML2Q5T2D2 321 aa25.8■■□□□ 1.72
LTBP4-227ENST00000600026 ANKRD23Q86SG2 305 aa25.8■■□□□ 1.72
LTBP4-227ENST00000600026 IQCA1Q86XH1 822 aa25.8■■□□□ 1.72
LTBP4-227ENST00000600026 LRRC47Q8N1G4 583 aaKnown RBP25.8■■□□□ 1.72
LTBP4-227ENST00000600026 KIF2CQ99661 725 aa25.8■■□□□ 1.72
LTBP4-227ENST00000600026 VCPKMTQ9H867 229 aa25.8■■□□□ 1.72
LTBP4-227ENST00000600026 ZSWIM6Q9HCJ5 1215 aa25.8■■□□□ 1.72
LTBP4-227ENST00000600026 AGTPBP1Q9UPW5 1226 aa25.8■■□□□ 1.72
LTBP4-227ENST00000600026 RUFY3Q7L099 469 aa25.79■■□□□ 1.72
LTBP4-227ENST00000600026 DHX32Q7L7V1 743 aaKnown RBP25.79■■□□□ 1.72
LTBP4-227ENST00000600026 IL27Q8NEV9 243 aa25.79■■□□□ 1.72
LTBP4-227ENST00000600026 MKL1Q969V6 931 aa25.79■■□□□ 1.72
LTBP4-227ENST00000600026 WBP1LQ9NX94 342 aa25.79■■□□□ 1.72
LTBP4-227ENST00000600026 COL9A3Q14050 684 aaPredicted RBP25.78■■□□□ 1.72
LTBP4-227ENST00000600026 KIAA1755Q5JYT7 1200 aa25.78■■□□□ 1.72
LTBP4-227ENST00000600026 OTUD7BQ6GQQ9 843 aa25.78■■□□□ 1.72
LTBP4-227ENST00000600026 ZSCAN10Q96SZ4 725 aaPredicted RBP25.78■■□□□ 1.72
LTBP4-227ENST00000600026 PARP14Q460N5 1801 aa25.78■■□□□ 1.72
LTBP4-227ENST00000600026 TNKSO95271 1327 aa25.78■■□□□ 1.72
LTBP4-227ENST00000600026 VCAM1P19320 739 aa25.77■■□□□ 1.72
LTBP4-227ENST00000600026 RPS6KB1P23443 525 aa25.77■■□□□ 1.72
LTBP4-227ENST00000600026 ANTXR2P58335 489 aa25.77■■□□□ 1.72
LTBP4-227ENST00000600026 RCSD1Q6JBY9 416 aa25.77■■□□□ 1.72
LTBP4-227ENST00000600026 UBAC1Q9BSL1 405 aa25.77■■□□□ 1.72
LTBP4-227ENST00000600026 UPF3BQ9BZI7 483 aaKnown RBP25.77■■□□□ 1.72
LTBP4-227ENST00000600026 GOPCQ9HD26 462 aa25.77■■□□□ 1.72
LTBP4-227ENST00000600026 ZCCHC17Q9NP64 241 aaKnown RBP25.77■■□□□ 1.72
LTBP4-227ENST00000600026 RNF186Q9NXI6 227 aa25.77■■□□□ 1.72
LTBP4-227ENST00000600026 SYNPO2Q9UMS6 1093 aa25.77■■□□□ 1.72
LTBP4-227ENST00000600026 WDR19Q8NEZ3 1342 aa25.77■■□□□ 1.72
LTBP4-227ENST00000600026 PDHXO00330 501 aa25.76■■□□□ 1.71
LTBP4-227ENST00000600026 PRC1O43663 620 aa25.76■■□□□ 1.71
LTBP4-227ENST00000600026 ALDH1A1P00352 501 aa25.76■■□□□ 1.71
LTBP4-227ENST00000600026 NEK4P51957 841 aa25.76■■□□□ 1.71
LTBP4-227ENST00000600026 SART3Q15020 963 aaKnown RBP25.76■■□□□ 1.71
LTBP4-227ENST00000600026 CCDC178Q5BJE1 867 aa25.76■■□□□ 1.71
LTBP4-227ENST00000600026 CHST3Q7LGC8 479 aa25.76■■□□□ 1.71
LTBP4-227ENST00000600026 TMEM47Q9BQJ4 181 aa25.76■■□□□ 1.71
LTBP4-227ENST00000600026 CPA1P15085 419 aa25.75■■□□□ 1.71
LTBP4-227ENST00000600026 DGKHQ86XP1 1220 aa25.75■■□□□ 1.71
LTBP4-227ENST00000600026 SPICE1Q8N0Z3 855 aa25.75■■□□□ 1.71
LTBP4-227ENST00000600026 ENAHQ8N8S7 591 aaPredicted RBP25.75■■□□□ 1.71
LTBP4-227ENST00000600026 LPAR1Q92633 364 aa25.75■■□□□ 1.71
LTBP4-227ENST00000600026 TTC14Q96N46 770 aa25.75■■□□□ 1.71
LTBP4-227ENST00000600026 MTA3Q9BTC8 594 aa25.75■■□□□ 1.71
LTBP4-227ENST00000600026 PDRG1Q9NUG6 133 aa25.75■■□□□ 1.71
LTBP4-227ENST00000600026 SLC45A1Q9Y2W3 748 aa25.75■■□□□ 1.71
LTBP4-227ENST00000600026 ERICH2A1L162 156 aa25.74■■□□□ 1.71
LTBP4-227ENST00000600026 F5H6K3 240 aa25.74■■□□□ 1.71
LTBP4-227ENST00000600026 RAD21O60216 631 aa25.74■■□□□ 1.71
LTBP4-227ENST00000600026 NDUFB10O96000 172 aa25.74■■□□□ 1.71
LTBP4-227ENST00000600026 TOP1P11387 765 aaKnown RBP25.74■■□□□ 1.71
LTBP4-227ENST00000600026 FGD1P98174 961 aa25.74■■□□□ 1.71
LTBP4-227ENST00000600026 EXOSC10Q01780 885 aaKnown RBP25.74■■□□□ 1.71
LTBP4-227ENST00000600026 KLRC3Q07444 240 aa25.74■■□□□ 1.71
LTBP4-227ENST00000600026 PABPC4Q13310 644 aaKnown RBP eCLIP25.74■■□□□ 1.71
LTBP4-227ENST00000600026 SEC23AQ15436 765 aa25.74■■□□□ 1.71
LTBP4-227ENST00000600026 TAF1CQ15572 869 aaPredicted RBP25.74■■□□□ 1.71
LTBP4-227ENST00000600026 GMCL1P1Q8NEA9 526 aa25.74■■□□□ 1.71
LTBP4-227ENST00000600026 ABHD8Q96I13 439 aa25.74■■□□□ 1.71
LTBP4-227ENST00000600026 TMEM87BQ96K49 555 aa25.74■■□□□ 1.71
LTBP4-227ENST00000600026 BEGAINQ9BUH8 593 aa25.74■■□□□ 1.71
LTBP4-227ENST00000600026 RPAP3Q9H6T3 665 aaPredicted RBP25.74■■□□□ 1.71
LTBP4-227ENST00000600026 SAGE1Q9NXZ1 904 aa25.74■■□□□ 1.71
LTBP4-227ENST00000600026 RLFQ13129 1914 aa25.73■■□□□ 1.71
LTBP4-227ENST00000600026 ST18O60284 1047 aa25.73■■□□□ 1.71
LTBP4-227ENST00000600026 TRPA1O75762 1119 aa25.73■■□□□ 1.71
LTBP4-227ENST00000600026 HSPA8P11142 646 aaKnown RBP25.73■■□□□ 1.71
LTBP4-227ENST00000600026 ANKS1AQ92625 1134 aa25.73■■□□□ 1.71
LTBP4-227ENST00000600026 IFIT3O14879 490 aaKnown RBP25.72■■□□□ 1.71
LTBP4-227ENST00000600026 WDR46O15213 610 aaKnown RBP25.72■■□□□ 1.71
LTBP4-227ENST00000600026 HOXA7P31268 230 aaPredicted RBP25.72■■□□□ 1.71
LTBP4-227ENST00000600026 SLFN13Q68D06 897 aa25.72■■□□□ 1.71
LTBP4-227ENST00000600026 PARK7Q99497 189 aaKnown RBP25.72■■□□□ 1.71
LTBP4-227ENST00000600026 TSHZ2Q9NRE2 1034 aa25.72■■□□□ 1.71
LTBP4-227ENST00000600026 PNMA3Q9UL41 463 aa25.72■■□□□ 1.71
LTBP4-227ENST00000600026 USP17L15C9J2P7 530 aa25.71■■□□□ 1.71
LTBP4-227ENST00000600026 USP17L13C9JLJ4 530 aa25.71■■□□□ 1.71
LTBP4-227ENST00000600026 USP17L11C9JVI0 530 aa25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms