RNA–Protein interactions for RNA: ENST00000599964.1

COPE-209, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 4

Gene COPE, Length 542 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-209ENST00000599964 ANKS1AQ92625 1134 aa22.32■■□□□ 1.16
COPE-209ENST00000599964 KAT14Q9H8E8 782 aa22.32■■□□□ 1.16
COPE-209ENST00000599964 MYH4Q9Y623 1939 aa22.31■■□□□ 1.16
COPE-209ENST00000599964 A0A0G2JLL6 359 aaPredicted RBP22.31■■□□□ 1.16
COPE-209ENST00000599964 A0A1W2PRG0 241 aa22.31■■□□□ 1.16
COPE-209ENST00000599964 EXOSC10Q01780 885 aaKnown RBP22.31■■□□□ 1.16
COPE-209ENST00000599964 SREBF2Q12772 1141 aa22.31■■□□□ 1.16
COPE-209ENST00000599964 ZYXQ15942 572 aaKnown RBP22.31■■□□□ 1.16
COPE-209ENST00000599964 PRRT2Q7Z6L0 340 aaPredicted RBP22.31■■□□□ 1.16
COPE-209ENST00000599964 LPAR1Q92633 364 aa22.31■■□□□ 1.16
COPE-209ENST00000599964 WDR33Q9C0J8 1336 aaKnown RBP22.31■■□□□ 1.16
COPE-209ENST00000599964 RAD21O60216 631 aa22.3■■□□□ 1.16
COPE-209ENST00000599964 LIFRP42702 1097 aa22.3■■□□□ 1.16
COPE-209ENST00000599964 HMGCS2P54868 508 aa22.3■■□□□ 1.16
COPE-209ENST00000599964 SEC23AQ15436 765 aa22.3■■□□□ 1.16
COPE-209ENST00000599964 RCSD1Q6JBY9 416 aa22.3■■□□□ 1.16
COPE-209ENST00000599964 PROCA1Q8NCQ7 364 aaPredicted RBP22.3■■□□□ 1.16
COPE-209ENST00000599964 GMCL1P1Q8NEA9 526 aa22.3■■□□□ 1.16
COPE-209ENST00000599964 IL27Q8NEV9 243 aa22.3■■□□□ 1.16
COPE-209ENST00000599964 IGDCC4Q8TDY8 1250 aa22.3■■□□□ 1.16
COPE-209ENST00000599964 TMEM47Q9BQJ4 181 aa22.3■■□□□ 1.16
COPE-209ENST00000599964 VCPKMTQ9H867 229 aa22.3■■□□□ 1.16
COPE-209ENST00000599964 CCL15-CCL14A0A0B4J2E2 113 aa22.29■■□□□ 1.16
COPE-209ENST00000599964 CCDC69A6NI79 296 aa22.29■■□□□ 1.16
COPE-209ENST00000599964 SH2B2O14492 632 aaPredicted RBP22.29■■□□□ 1.16
COPE-209ENST00000599964 MAP2K2P36507 400 aa22.29■■□□□ 1.16
COPE-209ENST00000599964 VEGFBP49765 207 aa22.29■■□□□ 1.16
COPE-209ENST00000599964 CCL15Q16663 113 aa22.29■■□□□ 1.16
COPE-209ENST00000599964 NFXL1Q6ZNB6 911 aa22.29■■□□□ 1.16
COPE-209ENST00000599964 GADL1Q6ZQY3 521 aa22.29■■□□□ 1.16
COPE-209ENST00000599964 LRRC47Q8N1G4 583 aaKnown RBP22.29■■□□□ 1.16
COPE-209ENST00000599964 C12orf42Q96LP6 360 aa22.29■■□□□ 1.16
COPE-209ENST00000599964 UPF3BQ9BZI7 483 aaKnown RBP22.29■■□□□ 1.16
COPE-209ENST00000599964 PDRG1Q9NUG6 133 aa22.29■■□□□ 1.16
COPE-209ENST00000599964 F5H6K3 240 aa22.28■■□□□ 1.16
COPE-209ENST00000599964 CPA1P15085 419 aa22.28■■□□□ 1.16
COPE-209ENST00000599964 KIF23Q02241 960 aaPredicted RBP22.28■■□□□ 1.16
COPE-209ENST00000599964 KLRC3Q07444 240 aa22.28■■□□□ 1.16
COPE-209ENST00000599964 PABPC4Q13310 644 aaKnown RBP eCLIP22.28■■□□□ 1.16
COPE-209ENST00000599964 OTUD7BQ6GQQ9 843 aa22.28■■□□□ 1.16
COPE-209ENST00000599964 SYNE3Q6ZMZ3 975 aa22.28■■□□□ 1.16
COPE-209ENST00000599964 PNMA1Q8ND90 353 aa22.28■■□□□ 1.16
COPE-209ENST00000599964 MS4A4AQ96JQ5 239 aa22.28■■□□□ 1.16
COPE-209ENST00000599964 Q6ZUG5 572 aa22.27■■□□□ 1.16
COPE-209ENST00000599964 CATIPQ7Z7H3 387 aa22.27■■□□□ 1.16
COPE-209ENST00000599964 FBXL16Q8N461 479 aa22.27■■□□□ 1.16
COPE-209ENST00000599964 TCEANC2Q96MN5 208 aa22.27■■□□□ 1.16
COPE-209ENST00000599964 LRRC2Q9BYS8 371 aa22.27■■□□□ 1.16
COPE-209ENST00000599964 LY9Q9HBG7 655 aa22.27■■□□□ 1.16
COPE-209ENST00000599964 EMILIN3Q9NT22 766 aa22.27■■□□□ 1.16
COPE-209ENST00000599964 PTPRFP10586 1907 aa22.27■■□□□ 1.16
COPE-209ENST00000599964 TESPA1A2RU30 521 aaPredicted RBP22.26■■□□□ 1.15
COPE-209ENST00000599964 WDR46O15213 610 aaKnown RBP22.26■■□□□ 1.15
COPE-209ENST00000599964 NEK4P51957 841 aa22.26■■□□□ 1.15
COPE-209ENST00000599964 RABEP1Q15276 862 aa22.26■■□□□ 1.15
COPE-209ENST00000599964 ANKRD1Q15327 319 aa22.26■■□□□ 1.15
COPE-209ENST00000599964 SLFN13Q68D06 897 aa22.26■■□□□ 1.15
COPE-209ENST00000599964 GMCL1Q96IK5 515 aa22.26■■□□□ 1.15
COPE-209ENST00000599964 LOC285556D6RIA3 1793 aa22.25■■□□□ 1.15
COPE-209ENST00000599964 NDUFB10O96000 172 aa22.25■■□□□ 1.15
COPE-209ENST00000599964 COL9A3Q14050 684 aaPredicted RBP22.25■■□□□ 1.15
COPE-209ENST00000599964 SGMS1Q86VZ5 419 aa22.25■■□□□ 1.15
COPE-209ENST00000599964 SPICE1Q8N0Z3 855 aa22.25■■□□□ 1.15
COPE-209ENST00000599964 DCAF4Q8WV16 495 aa22.25■■□□□ 1.15
COPE-209ENST00000599964 BRI3BPQ8WY22 251 aa22.25■■□□□ 1.15
COPE-209ENST00000599964 ZCCHC17Q9NP64 241 aaKnown RBP22.25■■□□□ 1.15
COPE-209ENST00000599964 AGTPBP1Q9UPW5 1226 aa22.25■■□□□ 1.15
COPE-209ENST00000599964 SLC12A7Q9Y666 1083 aa22.25■■□□□ 1.15
COPE-209ENST00000599964 AOC2O75106 756 aa22.24■■□□□ 1.15
COPE-209ENST00000599964 CALM1P0DP23 149 aa22.24■■□□□ 1.15
COPE-209ENST00000599964 CALM2P0DP24 149 aa22.24■■□□□ 1.15
COPE-209ENST00000599964 CALM3P0DP25 149 aa22.24■■□□□ 1.15
COPE-209ENST00000599964 VCAM1P19320 739 aa22.24■■□□□ 1.15
COPE-209ENST00000599964 SLC1A4P43007 532 aa22.24■■□□□ 1.15
COPE-209ENST00000599964 TM4SF4P48230 202 aa22.24■■□□□ 1.15
COPE-209ENST00000599964 ANKRD23Q86SG2 305 aa22.24■■□□□ 1.15
COPE-209ENST00000599964 BRF1Q92994 677 aa22.24■■□□□ 1.15
COPE-209ENST00000599964 KIF2CQ99661 725 aa22.24■■□□□ 1.15
COPE-209ENST00000599964 ALDH8A1Q9H2A2 487 aaPredicted RBP22.24■■□□□ 1.15
COPE-209ENST00000599964 ISY1Q9ULR0 285 aaKnown RBP22.24■■□□□ 1.15
COPE-209ENST00000599964 MTMR7Q9Y216 660 aa22.24■■□□□ 1.15
COPE-209ENST00000599964 SLC45A1Q9Y2W3 748 aa22.24■■□□□ 1.15
COPE-209ENST00000599964 USP17L15C9J2P7 530 aa22.23■■□□□ 1.15
COPE-209ENST00000599964 USP17L13C9JLJ4 530 aa22.23■■□□□ 1.15
COPE-209ENST00000599964 USP17L11C9JVI0 530 aa22.23■■□□□ 1.15
COPE-209ENST00000599964 USP17L18D6R9N7 530 aa22.23■■□□□ 1.15
COPE-209ENST00000599964 USP17L22D6RA61 530 aa22.23■■□□□ 1.15
COPE-209ENST00000599964 USP17L17D6RBQ6 530 aa22.23■■□□□ 1.15
COPE-209ENST00000599964 USP17L19D6RCP7 530 aa22.23■■□□□ 1.15
COPE-209ENST00000599964 USP17L20D6RJB6 530 aa22.23■■□□□ 1.15
COPE-209ENST00000599964 DDAH1O94760 285 aa22.23■■□□□ 1.15
COPE-209ENST00000599964 USP17L24Q0WX57 530 aa22.23■■□□□ 1.15
COPE-209ENST00000599964 ZNF654Q8IZM8 581 aa22.23■■□□□ 1.15
COPE-209ENST00000599964 AGXT2Q9BYV1 514 aa22.23■■□□□ 1.15
COPE-209ENST00000599964 TANGO6Q9C0B7 1094 aa22.23■■□□□ 1.15
COPE-209ENST00000599964 GPHNQ9NQX3 736 aaPredicted RBP22.23■■□□□ 1.15
COPE-209ENST00000599964 PNMA3Q9UL41 463 aa22.23■■□□□ 1.15
COPE-209ENST00000599964 ST18O60284 1047 aa22.22■■□□□ 1.15
COPE-209ENST00000599964 ALDH1A1P00352 501 aa22.22■■□□□ 1.15
COPE-209ENST00000599964 BMP3P12645 472 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms