RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 KIAA1755Q5JYT7 1200 aa33.45■■■□□ 2.95
SSBP4-206ENST00000599699 PAGR1Q9BTK6 254 aa33.45■■■□□ 2.95
SSBP4-206ENST00000599699 TOMM22Q9NS69 142 aa33.45■■■□□ 2.95
SSBP4-206ENST00000599699 PTCH2Q9Y6C5 1203 aa33.45■■■□□ 2.95
SSBP4-206ENST00000599699 ZSWIM8A7E2V4 1837 aa33.44■■■□□ 2.94
SSBP4-206ENST00000599699 TNPO2O14787 897 aaKnown RBP33.44■■■□□ 2.94
SSBP4-206ENST00000599699 PRMT2P55345 433 aa33.44■■■□□ 2.94
SSBP4-206ENST00000599699 HAND2P61296 217 aa33.44■■■□□ 2.94
SSBP4-206ENST00000599699 GPRC5AQ8NFJ5 357 aa33.44■■■□□ 2.94
SSBP4-206ENST00000599699 RUFY2Q8WXA3 655 aa33.44■■■□□ 2.94
SSBP4-206ENST00000599699 NYAP2Q9P242 653 aa33.44■■■□□ 2.94
SSBP4-206ENST00000599699 CLIP2Q9UDT6 1046 aa33.44■■■□□ 2.94
SSBP4-206ENST00000599699 SRRDQ9UH36 339 aa33.44■■■□□ 2.94
SSBP4-206ENST00000599699 DDX52Q9Y2R4 599 aaKnown RBP eCLIP33.44■■■□□ 2.94
SSBP4-206ENST00000599699 NEDD1Q8NHV4 660 aa33.43■■■□□ 2.94
SSBP4-206ENST00000599699 CEP95Q96GE4 821 aa33.43■■■□□ 2.94
SSBP4-206ENST00000599699 MORF4L1Q9UBU8 362 aa33.43■■■□□ 2.94
SSBP4-206ENST00000599699 IGKV6D-41A0A0C4DH26 115 aa33.42■■■□□ 2.94
SSBP4-206ENST00000599699 TSPY2A6NKD2 308 aa33.42■■■□□ 2.94
SSBP4-206ENST00000599699 RANBP6O60518 1105 aaKnown RBP33.42■■■□□ 2.94
SSBP4-206ENST00000599699 PEX10O60683 326 aa33.42■■■□□ 2.94
SSBP4-206ENST00000599699 CHMLP26374 656 aa33.42■■■□□ 2.94
SSBP4-206ENST00000599699 SKAP1Q86WV1 359 aa33.42■■■□□ 2.94
SSBP4-206ENST00000599699 TXNRD2Q9NNW7 524 aa33.42■■■□□ 2.94
SSBP4-206ENST00000599699 RBPJLQ9UBG7 517 aa33.42■■■□□ 2.94
SSBP4-206ENST00000599699 MYPNQ86TC9 1320 aa33.42■■■□□ 2.94
SSBP4-206ENST00000599699 RRP12Q5JTH9 1297 aaKnown RBP33.41■■■□□ 2.94
SSBP4-206ENST00000599699 COA7Q96BR5 231 aa33.41■■■□□ 2.94
SSBP4-206ENST00000599699 MTMR4Q9NYA4 1195 aa33.41■■■□□ 2.94
SSBP4-206ENST00000599699 WDR46O15213 610 aaKnown RBP33.4■■■□□ 2.94
SSBP4-206ENST00000599699 TTLL1O95922 423 aa33.4■■■□□ 2.94
SSBP4-206ENST00000599699 COG2Q14746 738 aa33.4■■■□□ 2.94
SSBP4-206ENST00000599699 SLC9C1Q4G0N8 1177 aa33.4■■■□□ 2.94
SSBP4-206ENST00000599699 CCAR1Q8IX12 1150 aaKnown RBP33.4■■■□□ 2.94
SSBP4-206ENST00000599699 RAET1EQ8TD07 263 aa33.4■■■□□ 2.94
SSBP4-206ENST00000599699 DSCC1Q9BVC3 393 aa33.4■■■□□ 2.94
SSBP4-206ENST00000599699 RAD50Q92878 1312 aa33.39■■■□□ 2.94
SSBP4-206ENST00000599699 ZNF213O14771 459 aa33.39■■■□□ 2.94
SSBP4-206ENST00000599699 ORC4O43929 436 aa33.39■■■□□ 2.94
SSBP4-206ENST00000599699 ERVK-9P63128 1117 aa33.39■■■□□ 2.94
SSBP4-206ENST00000599699 ERVK-24P63145 666 aa33.39■■■□□ 2.94
SSBP4-206ENST00000599699 PRKCZQ05513 592 aa33.39■■■□□ 2.94
SSBP4-206ENST00000599699 SAMD1Q6SPF0 538 aaPredicted RBP33.39■■■□□ 2.94
SSBP4-206ENST00000599699 HOXC10Q9NYD6 342 aa33.39■■■□□ 2.94
SSBP4-206ENST00000599699 RABGAP1Q9Y3P9 1069 aa33.39■■■□□ 2.94
SSBP4-206ENST00000599699 TACC3Q9Y6A5 838 aa33.39■■■□□ 2.94
SSBP4-206ENST00000599699 PLIN4Q96Q06 1357 aa33.38■■■□□ 2.93
SSBP4-206ENST00000599699 GREB1LQ9C091 1923 aaPredicted RBP33.38■■■□□ 2.93
SSBP4-206ENST00000599699 SPDYE16A6NNV3 312 aaPredicted RBP33.38■■■□□ 2.93
SSBP4-206ENST00000599699 FLOT1O75955 427 aa33.38■■■□□ 2.93
SSBP4-206ENST00000599699 IL25Q9H293 177 aa33.38■■■□□ 2.93
SSBP4-206ENST00000599699 PPP4R3BQ5MIZ7 849 aa33.37■■■□□ 2.93
SSBP4-206ENST00000599699 MFSD6Q6ZSS7 791 aa33.37■■■□□ 2.93
SSBP4-206ENST00000599699 CTNNA3Q9UI47 895 aa33.37■■■□□ 2.93
SSBP4-206ENST00000599699 GABRQQ9UN88 632 aa33.37■■■□□ 2.93
SSBP4-206ENST00000599699 FGRP09769 529 aa33.36■■■□□ 2.93
SSBP4-206ENST00000599699 Q3C1V9 767 aa33.36■■■□□ 2.93
SSBP4-206ENST00000599699 AKNAD1Q5T1N1 836 aa33.36■■■□□ 2.93
SSBP4-206ENST00000599699 POTEEQ6S8J3 1075 aa33.36■■■□□ 2.93
SSBP4-206ENST00000599699 NBPF11Q86T75 865 aa33.36■■■□□ 2.93
SSBP4-206ENST00000599699 LRRC47Q8N1G4 583 aaKnown RBP33.36■■■□□ 2.93
SSBP4-206ENST00000599699 RNF41Q9H4P4 317 aaPredicted RBP33.36■■■□□ 2.93
SSBP4-206ENST00000599699 CWC22Q9HCG8 908 aaKnown RBP33.36■■■□□ 2.93
SSBP4-206ENST00000599699 F5H6K3 240 aa33.35■■■□□ 2.93
SSBP4-206ENST00000599699 KLRC3Q07444 240 aa33.35■■■□□ 2.93
SSBP4-206ENST00000599699 FAM83BQ5T0W9 1011 aa33.35■■■□□ 2.93
SSBP4-206ENST00000599699 LBX2Q6XYB7 198 aa33.35■■■□□ 2.93
SSBP4-206ENST00000599699 MKL1Q969V6 931 aa33.35■■■□□ 2.93
SSBP4-206ENST00000599699 STX8Q9UNK0 236 aa33.35■■■□□ 2.93
SSBP4-206ENST00000599699 FLT3LGP49771 235 aa33.34■■■□□ 2.93
SSBP4-206ENST00000599699 CCNA1P78396 465 aa33.34■■■□□ 2.93
SSBP4-206ENST00000599699 IMMTQ16891 758 aaKnown RBP33.34■■■□□ 2.93
SSBP4-206ENST00000599699 TBC1D10CQ8IV04 446 aa33.34■■■□□ 2.93
SSBP4-206ENST00000599699 STAG1Q8WVM7 1258 aa33.34■■■□□ 2.93
SSBP4-206ENST00000599699 NBPF3Q9H094 633 aa33.34■■■□□ 2.93
SSBP4-206ENST00000599699 NMT2O60551 498 aa33.33■■■□□ 2.93
SSBP4-206ENST00000599699 CNMDO75829 334 aa33.33■■■□□ 2.93
SSBP4-206ENST00000599699 NDUFB10O96000 172 aa33.33■■■□□ 2.93
SSBP4-206ENST00000599699 PCP11498 1178 aaKnown RBP33.33■■■□□ 2.93
SSBP4-206ENST00000599699 MAPK4P31152 587 aa33.33■■■□□ 2.93
SSBP4-206ENST00000599699 DSG3P32926 999 aa33.33■■■□□ 2.93
SSBP4-206ENST00000599699 SOX10P56693 466 aa33.33■■■□□ 2.93
SSBP4-206ENST00000599699 SH3TC2Q8TF17 1288 aa33.33■■■□□ 2.93
SSBP4-206ENST00000599699 ARMC5Q96C12 935 aa33.33■■■□□ 2.93
SSBP4-206ENST00000599699 NUP88Q99567 741 aaPredicted RBP33.33■■■□□ 2.93
SSBP4-206ENST00000599699 BTBD7Q9P203 1132 aa33.33■■■□□ 2.93
SSBP4-206ENST00000599699 HTTP42858 3142 aa33.33■■■□□ 2.93
SSBP4-206ENST00000599699 MGAMO43451 1857 aa33.33■■■□□ 2.93
SSBP4-206ENST00000599699 IL17RBQ9NRM6 502 aa33.32■■■□□ 2.92
SSBP4-206ENST00000599699 SYNPO2Q9UMS6 1093 aa33.32■■■□□ 2.92
SSBP4-206ENST00000599699 WDR78Q5VTH9 848 aa33.31■■■□□ 2.92
SSBP4-206ENST00000599699 ATG4CQ96DT6 458 aa33.31■■■□□ 2.92
SSBP4-206ENST00000599699 PORCNQ9H237 461 aa33.31■■■□□ 2.92
SSBP4-206ENST00000599699 FBXO28Q9NVF7 368 aa33.31■■■□□ 2.92
SSBP4-206ENST00000599699 ISY1Q9ULR0 285 aaKnown RBP33.31■■■□□ 2.92
SSBP4-206ENST00000599699 SGSM2O43147 1006 aa33.3■■■□□ 2.92
SSBP4-206ENST00000599699 GRK4P32298 578 aa33.3■■■□□ 2.92
SSBP4-206ENST00000599699 BMP2KLQ5H9B9 411 aa33.3■■■□□ 2.92
SSBP4-206ENST00000599699 BIN2Q9UBW5 565 aaPredicted RBP33.3■■■□□ 2.92
SSBP4-206ENST00000599699 MYCP01106 439 aaPredicted RBP33.29■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms