RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 GADL1Q6ZQY3 521 aa19.49■□□□□ 0.71
SHKBP1-219ENST00000599575 ZSCAN10Q96SZ4 725 aaPredicted RBP19.49■□□□□ 0.71
SHKBP1-219ENST00000599575 EMILIN3Q9NT22 766 aa19.49■□□□□ 0.71
SHKBP1-219ENST00000599575 WDR19Q8NEZ3 1342 aa19.49■□□□□ 0.71
SHKBP1-219ENST00000599575 PHIPQ8WWQ0 1821 aa19.48■□□□□ 0.71
SHKBP1-219ENST00000599575 ERICH2A1L162 156 aa19.48■□□□□ 0.71
SHKBP1-219ENST00000599575 WDR46O15213 610 aaKnown RBP19.48■□□□□ 0.71
SHKBP1-219ENST00000599575 PSMA5P28066 241 aa19.48■□□□□ 0.71
SHKBP1-219ENST00000599575 ANAPC15P60006 121 aa19.48■□□□□ 0.71
SHKBP1-219ENST00000599575 ATP2B2Q01814 1243 aa19.48■□□□□ 0.71
SHKBP1-219ENST00000599575 NOM1Q5C9Z4 860 aaKnown RBP19.48■□□□□ 0.71
SHKBP1-219ENST00000599575 GPAT2Q6NUI2 795 aa19.48■□□□□ 0.71
SHKBP1-219ENST00000599575 STOX1Q6ZVD7 989 aa19.48■□□□□ 0.71
SHKBP1-219ENST00000599575 PARK7Q99497 189 aaKnown RBP19.48■□□□□ 0.71
SHKBP1-219ENST00000599575 USP17L15C9J2P7 530 aa19.47■□□□□ 0.71
SHKBP1-219ENST00000599575 USP17L13C9JLJ4 530 aa19.47■□□□□ 0.71
SHKBP1-219ENST00000599575 USP17L11C9JVI0 530 aa19.47■□□□□ 0.71
SHKBP1-219ENST00000599575 USP17L18D6R9N7 530 aa19.47■□□□□ 0.71
SHKBP1-219ENST00000599575 USP17L22D6RA61 530 aa19.47■□□□□ 0.71
SHKBP1-219ENST00000599575 USP17L17D6RBQ6 530 aa19.47■□□□□ 0.71
SHKBP1-219ENST00000599575 USP17L19D6RCP7 530 aa19.47■□□□□ 0.71
SHKBP1-219ENST00000599575 USP17L20D6RJB6 530 aa19.47■□□□□ 0.71
SHKBP1-219ENST00000599575 PDHXO00330 501 aa19.47■□□□□ 0.71
SHKBP1-219ENST00000599575 OSBPP22059 807 aa19.47■□□□□ 0.71
SHKBP1-219ENST00000599575 USP17L24Q0WX57 530 aa19.47■□□□□ 0.71
SHKBP1-219ENST00000599575 MB21D2Q8IYB1 491 aaPredicted RBP19.47■□□□□ 0.71
SHKBP1-219ENST00000599575 FAM43AQ8N2R8 423 aa19.47■□□□□ 0.71
SHKBP1-219ENST00000599575 TMTC2Q8N394 836 aa19.47■□□□□ 0.71
SHKBP1-219ENST00000599575 GTF3C2Q8WUA4 911 aaPredicted RBP19.47■□□□□ 0.71
SHKBP1-219ENST00000599575 TMEM87BQ96K49 555 aa19.47■□□□□ 0.71
SHKBP1-219ENST00000599575 NEK1Q96PY6 1258 aa19.47■□□□□ 0.71
SHKBP1-219ENST00000599575 ZFYVE28Q9HCC9 887 aa19.47■□□□□ 0.71
SHKBP1-219ENST00000599575 RNF186Q9NXI6 227 aa19.47■□□□□ 0.71
SHKBP1-219ENST00000599575 F5H6K3 240 aa19.46■□□□□ 0.71
SHKBP1-219ENST00000599575 VCAM1P19320 739 aa19.46■□□□□ 0.71
SHKBP1-219ENST00000599575 KLRC3Q07444 240 aa19.46■□□□□ 0.71
SHKBP1-219ENST00000599575 RCSD1Q6JBY9 416 aa19.46■□□□□ 0.71
SHKBP1-219ENST00000599575 CLEC10AQ8IUN9 316 aa19.46■□□□□ 0.71
SHKBP1-219ENST00000599575 RASEFQ8IZ41 740 aa19.46■□□□□ 0.71
SHKBP1-219ENST00000599575 GMCL1Q96IK5 515 aa19.46■□□□□ 0.71
SHKBP1-219ENST00000599575 TAF6LQ9Y6J9 622 aa19.46■□□□□ 0.71
SHKBP1-219ENST00000599575 TNKSO95271 1327 aa19.46■□□□□ 0.71
SHKBP1-219ENST00000599575 PCNTO95613 3336 aa19.46■□□□□ 0.71
SHKBP1-219ENST00000599575 DHX32Q7L7V1 743 aaKnown RBP19.45■□□□□ 0.7
SHKBP1-219ENST00000599575 ENAHQ8N8S7 591 aaPredicted RBP19.45■□□□□ 0.7
SHKBP1-219ENST00000599575 TM6SF1Q9BZW5 370 aa19.45■□□□□ 0.7
SHKBP1-219ENST00000599575 UPF2Q9HAU5 1272 aaKnown RBP19.45■□□□□ 0.7
SHKBP1-219ENST00000599575 SNX14Q9Y5W7 946 aa19.45■□□□□ 0.7
SHKBP1-219ENST00000599575 MYPNQ86TC9 1320 aa19.45■□□□□ 0.7
SHKBP1-219ENST00000599575 IFIT3O14879 490 aaKnown RBP19.44■□□□□ 0.7
SHKBP1-219ENST00000599575 NMT2O60551 498 aa19.44■□□□□ 0.7
SHKBP1-219ENST00000599575 GCLCP48506 637 aaPredicted RBP19.44■□□□□ 0.7
SHKBP1-219ENST00000599575 IRX3P78415 501 aaPredicted RBP19.44■□□□□ 0.7
SHKBP1-219ENST00000599575 TAF1CQ15572 869 aaPredicted RBP19.44■□□□□ 0.7
SHKBP1-219ENST00000599575 ZYXQ15942 572 aaKnown RBP19.44■□□□□ 0.7
SHKBP1-219ENST00000599575 TREML2Q5T2D2 321 aa19.44■□□□□ 0.7
SHKBP1-219ENST00000599575 CATSPERGQ6ZRH7 1159 aa19.44■□□□□ 0.7
SHKBP1-219ENST00000599575 IL17RAQ96F46 866 aa19.44■□□□□ 0.7
SHKBP1-219ENST00000599575 TMEM47Q9BQJ4 181 aa19.44■□□□□ 0.7
SHKBP1-219ENST00000599575 KAT14Q9H8E8 782 aa19.44■□□□□ 0.7
SHKBP1-219ENST00000599575 HOXC10Q9NYD6 342 aa19.44■□□□□ 0.7
SHKBP1-219ENST00000599575 LOC285556D6RIA3 1793 aa19.44■□□□□ 0.7
SHKBP1-219ENST00000599575 PRC1O43663 620 aa19.43■□□□□ 0.7
SHKBP1-219ENST00000599575 TLR2O60603 784 aa19.43■□□□□ 0.7
SHKBP1-219ENST00000599575 TRPA1O75762 1119 aa19.43■□□□□ 0.7
SHKBP1-219ENST00000599575 NDUFB10O96000 172 aa19.43■□□□□ 0.7
SHKBP1-219ENST00000599575 LIFRP42702 1097 aa19.43■□□□□ 0.7
SHKBP1-219ENST00000599575 SEC23AQ15436 765 aa19.43■□□□□ 0.7
SHKBP1-219ENST00000599575 IFIT1BQ5T764 474 aaKnown RBP19.43■□□□□ 0.7
SHKBP1-219ENST00000599575 LBX2Q6XYB7 198 aa19.43■□□□□ 0.7
SHKBP1-219ENST00000599575 CYB5R4Q7L1T6 521 aa19.43■□□□□ 0.7
SHKBP1-219ENST00000599575 FBXL16Q8N461 479 aa19.43■□□□□ 0.7
SHKBP1-219ENST00000599575 IL27Q8NEV9 243 aa19.43■□□□□ 0.7
SHKBP1-219ENST00000599575 DCAF4Q8WV16 495 aa19.43■□□□□ 0.7
SHKBP1-219ENST00000599575 PLA2G6O60733 806 aa19.42■□□□□ 0.7
SHKBP1-219ENST00000599575 COG2Q14746 738 aa19.42■□□□□ 0.7
SHKBP1-219ENST00000599575 WTAPQ15007 396 aa19.42■□□□□ 0.7
SHKBP1-219ENST00000599575 SLFN13Q68D06 897 aa19.42■□□□□ 0.7
SHKBP1-219ENST00000599575 BLOC1S2Q6QNY1 142 aa19.42■□□□□ 0.7
SHKBP1-219ENST00000599575 IGDCC4Q8TDY8 1250 aa19.42■□□□□ 0.7
SHKBP1-219ENST00000599575 SMCR8Q8TEV9 937 aaPredicted RBP19.42■□□□□ 0.7
SHKBP1-219ENST00000599575 ZKSCAN3Q9BRR0 538 aa19.42■□□□□ 0.7
SHKBP1-219ENST00000599575 ASCC2Q9H1I8 757 aaPredicted RBP19.42■□□□□ 0.7
SHKBP1-219ENST00000599575 RPAP3Q9H6T3 665 aaPredicted RBP19.42■□□□□ 0.7
SHKBP1-219ENST00000599575 FDX1P10109 184 aa19.41■□□□□ 0.7
SHKBP1-219ENST00000599575 SLC1A4P43007 532 aa19.41■□□□□ 0.7
SHKBP1-219ENST00000599575 ANTXR2P58335 489 aa19.41■□□□□ 0.7
SHKBP1-219ENST00000599575 EXOSC10Q01780 885 aaKnown RBP19.41■□□□□ 0.7
SHKBP1-219ENST00000599575 CRHR2Q13324 411 aa19.41■□□□□ 0.7
SHKBP1-219ENST00000599575 TMEM67Q5HYA8 995 aa19.41■□□□□ 0.7
SHKBP1-219ENST00000599575 LRRC47Q8N1G4 583 aaKnown RBP19.41■□□□□ 0.7
SHKBP1-219ENST00000599575 PNMA1Q8ND90 353 aa19.41■□□□□ 0.7
SHKBP1-219ENST00000599575 NKX2-3Q8TAU0 364 aa19.41■□□□□ 0.7
SHKBP1-219ENST00000599575 JAKMIP1Q96N16 626 aaKnown RBP19.41■□□□□ 0.7
SHKBP1-219ENST00000599575 PTPRFP10586 1907 aa19.41■□□□□ 0.7
SHKBP1-219ENST00000599575 SNHG28P0DPA3 235 aa19.4■□□□□ 0.7
SHKBP1-219ENST00000599575 BMP3P12645 472 aa19.4■□□□□ 0.7
SHKBP1-219ENST00000599575 CTCFP49711 727 aaPredicted RBP19.4■□□□□ 0.7
SHKBP1-219ENST00000599575 ADCK5Q3MIX3 580 aa19.4■□□□□ 0.7
SHKBP1-219ENST00000599575 GPATCH4Q5T3I0 446 aaKnown RBP19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms