RNA–Protein interactions for RNA: ENST00000599264.1

LINC00343-208, long intergenic non-protein coding RNA 343, humanhuman

TSL 3

Gene LINC00343, Length 807 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-208ENST00000599264 SLAMF8Q9P0V8 285 aa9.98□□□□□ -0.81
LINC00343-208ENST00000599264 GARTP22102 1010 aa9.97□□□□□ -0.81
LINC00343-208ENST00000599264 TPP2P29144 1249 aaPredicted RBP9.97□□□□□ -0.81
LINC00343-208ENST00000599264 PKN1Q16512 942 aa9.97□□□□□ -0.81
LINC00343-208ENST00000599264 TMEM67Q5HYA8 995 aa9.97□□□□□ -0.81
LINC00343-208ENST00000599264 SLC38A3Q99624 504 aa9.97□□□□□ -0.81
LINC00343-208ENST00000599264 GPR62Q9BZJ7 368 aa9.97□□□□□ -0.81
LINC00343-208ENST00000599264 COPRSQ9NQ92 184 aa9.97□□□□□ -0.81
LINC00343-208ENST00000599264 LRRC10BA6NIK2 292 aa9.96□□□□□ -0.82
LINC00343-208ENST00000599264 CHURC1-FNTBB4DL54 471 aa9.96□□□□□ -0.82
LINC00343-208ENST00000599264 TLR3O15455 904 aaKnown RBP9.96□□□□□ -0.82
LINC00343-208ENST00000599264 GLI1P08151 1106 aa9.96□□□□□ -0.82
LINC00343-208ENST00000599264 GBP1P32455 592 aa9.96□□□□□ -0.82
LINC00343-208ENST00000599264 MRPL58Q14197 206 aaKnown RBP9.96□□□□□ -0.82
LINC00343-208ENST00000599264 FBXL19Q6PCT2 694 aa9.96□□□□□ -0.82
LINC00343-208ENST00000599264 KSR1Q8IVT5 923 aa9.96□□□□□ -0.82
LINC00343-208ENST00000599264 DTWD2Q8NBA8 298 aa9.96□□□□□ -0.82
LINC00343-208ENST00000599264 FBXO27Q8NI29 283 aa9.96□□□□□ -0.82
LINC00343-208ENST00000599264 SYTL4Q96C24 671 aaPredicted RBP9.96□□□□□ -0.82
LINC00343-208ENST00000599264 ASPNQ9BXN1 380 aa9.96□□□□□ -0.82
LINC00343-208ENST00000599264 LRRC3Q9BY71 257 aa9.96□□□□□ -0.82
LINC00343-208ENST00000599264 DUSP15Q9H1R2 295 aaPredicted RBP9.96□□□□□ -0.82
LINC00343-208ENST00000599264 KCNQ5Q9NR82 932 aa9.96□□□□□ -0.82
LINC00343-208ENST00000599264 CLASP1Q7Z460 1538 aa9.96□□□□□ -0.82
LINC00343-208ENST00000599264 TOPBP1Q92547 1522 aa9.96□□□□□ -0.82
LINC00343-208ENST00000599264 ZNF648Q5T619 568 aaPredicted RBP9.95□□□□□ -0.82
LINC00343-208ENST00000599264 TTC6Q86TZ1 520 aa9.95□□□□□ -0.82
LINC00343-208ENST00000599264 KREMEN1Q96MU8 473 aa9.95□□□□□ -0.82
LINC00343-208ENST00000599264 DUSP13Q9UII6 198 aa9.95□□□□□ -0.82
LINC00343-208ENST00000599264 TARBP1Q13395 1621 aaKnown RBP9.94□□□□□ -0.82
LINC00343-208ENST00000599264 AQRO60306 1485 aaKnown RBP eCLIP9.94□□□□□ -0.82
LINC00343-208ENST00000599264 ESR1P03372 595 aa9.94□□□□□ -0.82
LINC00343-208ENST00000599264 MPZL3Q6UWV2 235 aa9.94□□□□□ -0.82
LINC00343-208ENST00000599264 TSPYL5Q86VY4 417 aaPredicted RBP9.94□□□□□ -0.82
LINC00343-208ENST00000599264 BAHD1Q8TBE0 780 aaPredicted RBP9.94□□□□□ -0.82
LINC00343-208ENST00000599264 ZNF296Q8WUU4 475 aaPredicted RBP9.94□□□□□ -0.82
LINC00343-208ENST00000599264 TMEM59LQ9UK28 342 aa9.94□□□□□ -0.82
LINC00343-208ENST00000599264 GREM1O60565 184 aa9.93□□□□□ -0.82
LINC00343-208ENST00000599264 SRFP11831 508 aa9.93□□□□□ -0.82
LINC00343-208ENST00000599264 FYB2Q5VWT5 728 aa9.93□□□□□ -0.82
LINC00343-208ENST00000599264 FAM84AQ96KN4 292 aa9.93□□□□□ -0.82
LINC00343-208ENST00000599264 KIF2CQ99661 725 aa9.93□□□□□ -0.82
LINC00343-208ENST00000599264 ASCC2Q9H1I8 757 aaPredicted RBP9.93□□□□□ -0.82
LINC00343-208ENST00000599264 C19orf73Q9NVV2 129 aa9.93□□□□□ -0.82
LINC00343-208ENST00000599264 PCDHB14Q9Y5E9 798 aa9.93□□□□□ -0.82
LINC00343-208ENST00000599264 RAG1P15918 1043 aa9.92□□□□□ -0.82
LINC00343-208ENST00000599264 LTKP29376 864 aa9.92□□□□□ -0.82
LINC00343-208ENST00000599264 MLANAQ16655 118 aa9.92□□□□□ -0.82
LINC00343-208ENST00000599264 GAB4Q2WGN9 574 aa9.92□□□□□ -0.82
LINC00343-208ENST00000599264 BRMS1Q9HCU9 246 aa9.92□□□□□ -0.82
LINC00343-208ENST00000599264 ZNF503-AS2A6NEH8 195 aa9.91□□□□□ -0.82
LINC00343-208ENST00000599264 RGS13O14921 159 aa9.91□□□□□ -0.82
LINC00343-208ENST00000599264 ATE1O95260 518 aa9.91□□□□□ -0.82
LINC00343-208ENST00000599264 RNF4P78317 190 aa9.91□□□□□ -0.82
LINC00343-208ENST00000599264 EGR3Q06889 387 aa9.91□□□□□ -0.82
LINC00343-208ENST00000599264 CLEC16AQ2KHT3 1053 aa9.91□□□□□ -0.82
LINC00343-208ENST00000599264 TMEM87AQ8NBN3 555 aa9.91□□□□□ -0.82
LINC00343-208ENST00000599264 ABHD4Q8TB40 342 aa9.91□□□□□ -0.82
LINC00343-208ENST00000599264 GMIPQ9P107 970 aa9.91□□□□□ -0.82
LINC00343-208ENST00000599264 DNAJC25-GNG10A0A024R161 153 aa9.9□□□□□ -0.82
LINC00343-208ENST00000599264 SLC22A31A6NKX4 558 aa9.9□□□□□ -0.82
LINC00343-208ENST00000599264 FZD5Q13467 585 aa9.9□□□□□ -0.82
LINC00343-208ENST00000599264 ARSHQ5FYA8 562 aa9.9□□□□□ -0.82
LINC00343-208ENST00000599264 DHX38Q92620 1227 aaKnown RBP9.9□□□□□ -0.82
LINC00343-208ENST00000599264 LIN37Q96GY3 246 aaPredicted RBP9.9□□□□□ -0.82
LINC00343-208ENST00000599264 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.9□□□□□ -0.82
LINC00343-208ENST00000599264 KIF13AQ9H1H9 1805 aa9.9□□□□□ -0.82
LINC00343-208ENST00000599264 WASH4PA8MWX3 477 aa9.89□□□□□ -0.83
LINC00343-208ENST00000599264 LRRN2O75325 713 aa9.89□□□□□ -0.83
LINC00343-208ENST00000599264 ZNF16P17020 682 aaPredicted RBP9.89□□□□□ -0.83
LINC00343-208ENST00000599264 ZNF165P49910 485 aa9.89□□□□□ -0.83
LINC00343-208ENST00000599264 HK2P52789 917 aa9.89□□□□□ -0.83
LINC00343-208ENST00000599264 APOBRQ0VD83 1088 aa9.89□□□□□ -0.83
LINC00343-208ENST00000599264 RALGPS1Q5JS13 557 aa9.89□□□□□ -0.83
LINC00343-208ENST00000599264 MYLIPQ8WY64 445 aa9.89□□□□□ -0.83
LINC00343-208ENST00000599264 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.89□□□□□ -0.83
LINC00343-208ENST00000599264 SYNJ1O43426 1573 aa9.88□□□□□ -0.83
LINC00343-208ENST00000599264 DNAJA2O60884 412 aa9.88□□□□□ -0.83
LINC00343-208ENST00000599264 MCM4P33991 863 aa9.88□□□□□ -0.83
LINC00343-208ENST00000599264 RAD51AP2Q09MP3 1159 aa9.88□□□□□ -0.83
LINC00343-208ENST00000599264 SEZ6Q53EL9 994 aa9.88□□□□□ -0.83
LINC00343-208ENST00000599264 REXO1Q8N1G1 1221 aaKnown RBP9.88□□□□□ -0.83
LINC00343-208ENST00000599264 BHLHE22Q8NFJ8 381 aaPredicted RBP9.88□□□□□ -0.83
LINC00343-208ENST00000599264 ENOX1Q8TC92 643 aaKnown RBP9.88□□□□□ -0.83
LINC00343-208ENST00000599264 ADAMTS10Q9H324 1103 aa9.88□□□□□ -0.83
LINC00343-208ENST00000599264 EHMT1Q9H9B1 1298 aa9.88□□□□□ -0.83
LINC00343-208ENST00000599264 ABCC8Q09428 1581 aa9.88□□□□□ -0.83
LINC00343-208ENST00000599264 DNMBPQ6XZF7 1577 aa9.88□□□□□ -0.83
LINC00343-208ENST00000599264 RBM47A0AV96 593 aaKnown RBP9.87□□□□□ -0.83
LINC00343-208ENST00000599264 LRRFIP1Q32MZ4 808 aaKnown RBP9.87□□□□□ -0.83
LINC00343-208ENST00000599264 OXR1Q8N573 874 aa9.87□□□□□ -0.83
LINC00343-208ENST00000599264 ADAMTS1Q9UHI8 967 aa9.87□□□□□ -0.83
LINC00343-208ENST00000599264 TOP2AP11388 1531 aaKnown RBP9.87□□□□□ -0.83
LINC00343-208ENST00000599264 HPXP02790 462 aa9.86□□□□□ -0.83
LINC00343-208ENST00000599264 PDZD8Q8NEN9 1154 aa9.86□□□□□ -0.83
LINC00343-208ENST00000599264 NKD1Q969G9 470 aa9.86□□□□□ -0.83
LINC00343-208ENST00000599264 PPP1R16BQ96T49 567 aa9.86□□□□□ -0.83
LINC00343-208ENST00000599264 NT5C1AQ9BXI3 368 aa9.86□□□□□ -0.83
LINC00343-208ENST00000599264 UBP1Q9NZI7 540 aa9.86□□□□□ -0.83
LINC00343-208ENST00000599264 PCDHA11Q9Y5I1 949 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms