RNA–Protein interactions for RNA: ENST00000598607.1

GTF2F1-206, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 4

Gene GTF2F1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-206ENST00000598607 HSPA1BP0DMV9 641 aaKnown RBP17.78■□□□□ 0.44
GTF2F1-206ENST00000598607 OSBPP22059 807 aa17.78■□□□□ 0.44
GTF2F1-206ENST00000598607 HSPA4P34932 840 aa17.78■□□□□ 0.44
GTF2F1-206ENST00000598607 TSGA10IPQ3SY00 556 aa17.78■□□□□ 0.44
GTF2F1-206ENST00000598607 PARK7Q99497 189 aaKnown RBP17.78■□□□□ 0.44
GTF2F1-206ENST00000598607 UBAC1Q9BSL1 405 aa17.78■□□□□ 0.44
GTF2F1-206ENST00000598607 ZFYVE28Q9HCC9 887 aa17.78■□□□□ 0.44
GTF2F1-206ENST00000598607 ZSWIM5Q9P217 1185 aa17.78■□□□□ 0.44
GTF2F1-206ENST00000598607 RLFQ13129 1914 aa17.78■□□□□ 0.44
GTF2F1-206ENST00000598607 NMT2O60551 498 aa17.77■□□□□ 0.44
GTF2F1-206ENST00000598607 HOXA7P31268 230 aaPredicted RBP17.77■□□□□ 0.44
GTF2F1-206ENST00000598607 NOVP48745 357 aa17.77■□□□□ 0.44
GTF2F1-206ENST00000598607 TREML2Q5T2D2 321 aa17.77■□□□□ 0.44
GTF2F1-206ENST00000598607 STOX1Q6ZVD7 989 aa17.77■□□□□ 0.44
GTF2F1-206ENST00000598607 USP26Q9BXU7 913 aa17.77■□□□□ 0.44
GTF2F1-206ENST00000598607 MGAMO43451 1857 aa17.77■□□□□ 0.43
GTF2F1-206ENST00000598607 COL11A1P12107 1806 aaPredicted RBP17.77■□□□□ 0.43
GTF2F1-206ENST00000598607 ERICH2A1L162 156 aa17.76■□□□□ 0.43
GTF2F1-206ENST00000598607 USP17L15C9J2P7 530 aa17.76■□□□□ 0.43
GTF2F1-206ENST00000598607 USP17L13C9JLJ4 530 aa17.76■□□□□ 0.43
GTF2F1-206ENST00000598607 USP17L11C9JVI0 530 aa17.76■□□□□ 0.43
GTF2F1-206ENST00000598607 USP17L18D6R9N7 530 aa17.76■□□□□ 0.43
GTF2F1-206ENST00000598607 USP17L22D6RA61 530 aa17.76■□□□□ 0.43
GTF2F1-206ENST00000598607 USP17L17D6RBQ6 530 aa17.76■□□□□ 0.43
GTF2F1-206ENST00000598607 USP17L19D6RCP7 530 aa17.76■□□□□ 0.43
GTF2F1-206ENST00000598607 USP17L20D6RJB6 530 aa17.76■□□□□ 0.43
GTF2F1-206ENST00000598607 WDR46O15213 610 aaKnown RBP17.76■□□□□ 0.43
GTF2F1-206ENST00000598607 RAD21O60216 631 aa17.76■□□□□ 0.43
GTF2F1-206ENST00000598607 TOP1P11387 765 aaKnown RBP17.76■□□□□ 0.43
GTF2F1-206ENST00000598607 VCAM1P19320 739 aa17.76■□□□□ 0.43
GTF2F1-206ENST00000598607 IRX3P78415 501 aaPredicted RBP17.76■□□□□ 0.43
GTF2F1-206ENST00000598607 USP17L24Q0WX57 530 aa17.76■□□□□ 0.43
GTF2F1-206ENST00000598607 DGKZQ13574 1117 aa17.76■□□□□ 0.43
GTF2F1-206ENST00000598607 SART3Q15020 963 aaKnown RBP17.76■□□□□ 0.43
GTF2F1-206ENST00000598607 DGKHQ86XP1 1220 aa17.76■□□□□ 0.43
GTF2F1-206ENST00000598607 ZSCAN10Q96SZ4 725 aaPredicted RBP17.76■□□□□ 0.43
GTF2F1-206ENST00000598607 TAF6LQ9Y6J9 622 aa17.76■□□□□ 0.43
GTF2F1-206ENST00000598607 CASP8AP2Q9UKL3 1982 aa17.76■□□□□ 0.43
GTF2F1-206ENST00000598607 TNKSO95271 1327 aa17.75■□□□□ 0.43
GTF2F1-206ENST00000598607 F5H6K3 240 aa17.75■□□□□ 0.43
GTF2F1-206ENST00000598607 MCM5P33992 734 aa17.75■□□□□ 0.43
GTF2F1-206ENST00000598607 KLRC3Q07444 240 aa17.75■□□□□ 0.43
GTF2F1-206ENST00000598607 CRHR2Q13324 411 aa17.75■□□□□ 0.43
GTF2F1-206ENST00000598607 C8orf34Q49A92 452 aa17.75■□□□□ 0.43
GTF2F1-206ENST00000598607 CYB5R4Q7L1T6 521 aa17.75■□□□□ 0.43
GTF2F1-206ENST00000598607 MB21D2Q8IYB1 491 aaPredicted RBP17.75■□□□□ 0.43
GTF2F1-206ENST00000598607 LRRC47Q8N1G4 583 aaKnown RBP17.75■□□□□ 0.43
GTF2F1-206ENST00000598607 GMCL1P1Q8NEA9 526 aa17.75■□□□□ 0.43
GTF2F1-206ENST00000598607 KCNB2Q92953 911 aa17.75■□□□□ 0.43
GTF2F1-206ENST00000598607 ZKSCAN3Q9BRR0 538 aa17.75■□□□□ 0.43
GTF2F1-206ENST00000598607 MTA3Q9BTC8 594 aa17.75■□□□□ 0.43
GTF2F1-206ENST00000598607 MYH6P13533 1939 aa17.74■□□□□ 0.43
GTF2F1-206ENST00000598607 HMGB1P09429 215 aaKnown RBP17.74■□□□□ 0.43
GTF2F1-206ENST00000598607 CTCFP49711 727 aaPredicted RBP17.74■□□□□ 0.43
GTF2F1-206ENST00000598607 CATSPERGQ6ZRH7 1159 aa17.74■□□□□ 0.43
GTF2F1-206ENST00000598607 RASEFQ8IZ41 740 aa17.74■□□□□ 0.43
GTF2F1-206ENST00000598607 NKX2-3Q8TAU0 364 aa17.74■□□□□ 0.43
GTF2F1-206ENST00000598607 SMCR8Q8TEV9 937 aaPredicted RBP17.74■□□□□ 0.43
GTF2F1-206ENST00000598607 ANKS1AQ92625 1134 aa17.74■□□□□ 0.43
GTF2F1-206ENST00000598607 NEK1Q96PY6 1258 aa17.74■□□□□ 0.43
GTF2F1-206ENST00000598607 TMEM47Q9BQJ4 181 aa17.74■□□□□ 0.43
GTF2F1-206ENST00000598607 ASCC2Q9H1I8 757 aaPredicted RBP17.74■□□□□ 0.43
GTF2F1-206ENST00000598607 RPAP3Q9H6T3 665 aaPredicted RBP17.74■□□□□ 0.43
GTF2F1-206ENST00000598607 A0A0G2JMZ2 1700 aa17.73■□□□□ 0.43
GTF2F1-206ENST00000598607 IFIT3O14879 490 aaKnown RBP17.73■□□□□ 0.43
GTF2F1-206ENST00000598607 FOXN1O15353 648 aa17.73■□□□□ 0.43
GTF2F1-206ENST00000598607 TLR2O60603 784 aa17.73■□□□□ 0.43
GTF2F1-206ENST00000598607 TBC1D8O95759 1140 aa17.73■□□□□ 0.43
GTF2F1-206ENST00000598607 NDUFB10O96000 172 aa17.73■□□□□ 0.43
GTF2F1-206ENST00000598607 NOM1Q5C9Z4 860 aaKnown RBP17.73■□□□□ 0.43
GTF2F1-206ENST00000598607 IFIT1BQ5T764 474 aaKnown RBP17.73■□□□□ 0.43
GTF2F1-206ENST00000598607 SLFN13Q68D06 897 aa17.73■□□□□ 0.43
GTF2F1-206ENST00000598607 RCSD1Q6JBY9 416 aa17.73■□□□□ 0.43
GTF2F1-206ENST00000598607 SPICE1Q8N0Z3 855 aa17.73■□□□□ 0.43
GTF2F1-206ENST00000598607 ENAHQ8N8S7 591 aaPredicted RBP17.73■□□□□ 0.43
GTF2F1-206ENST00000598607 GTF3C2Q8WUA4 911 aaPredicted RBP17.73■□□□□ 0.43
GTF2F1-206ENST00000598607 TANGO6Q9C0B7 1094 aa17.73■□□□□ 0.43
GTF2F1-206ENST00000598607 KAT14Q9H8E8 782 aa17.73■□□□□ 0.43
GTF2F1-206ENST00000598607 SNX14Q9Y5W7 946 aa17.73■□□□□ 0.43
GTF2F1-206ENST00000598607 CYP2C8P10632 490 aa17.72■□□□□ 0.43
GTF2F1-206ENST00000598607 PSMA5P28066 241 aa17.72■□□□□ 0.43
GTF2F1-206ENST00000598607 GCLCP48506 637 aaPredicted RBP17.72■□□□□ 0.43
GTF2F1-206ENST00000598607 KIAA1755Q5JYT7 1200 aa17.72■□□□□ 0.43
GTF2F1-206ENST00000598607 GMCL1Q96IK5 515 aa17.72■□□□□ 0.43
GTF2F1-206ENST00000598607 TMEM87BQ96K49 555 aa17.72■□□□□ 0.43
GTF2F1-206ENST00000598607 PCNTO95613 3336 aa17.72■□□□□ 0.43
GTF2F1-206ENST00000598607 MYPNQ86TC9 1320 aa17.72■□□□□ 0.43
GTF2F1-206ENST00000598607 WDR19Q8NEZ3 1342 aa17.72■□□□□ 0.43
GTF2F1-206ENST00000598607 PRC1O43663 620 aa17.71■□□□□ 0.43
GTF2F1-206ENST00000598607 HSPA8P11142 646 aaKnown RBP17.71■□□□□ 0.43
GTF2F1-206ENST00000598607 WTAPQ15007 396 aa17.71■□□□□ 0.43
GTF2F1-206ENST00000598607 SEC23AQ15436 765 aa17.71■□□□□ 0.43
GTF2F1-206ENST00000598607 FAM83BQ5T0W9 1011 aa17.71■□□□□ 0.43
GTF2F1-206ENST00000598607 DCAF4Q8WV16 495 aa17.71■□□□□ 0.43
GTF2F1-206ENST00000598607 HOXC10Q9NYD6 342 aa17.71■□□□□ 0.43
GTF2F1-206ENST00000598607 TSKSQ9UJT2 592 aa17.71■□□□□ 0.43
GTF2F1-206ENST00000598607 ADGRA2Q96PE1 1338 aa17.71■□□□□ 0.42
GTF2F1-206ENST00000598607 GPR25O00155 361 aa17.7■□□□□ 0.42
GTF2F1-206ENST00000598607 BMP3P12645 472 aa17.7■□□□□ 0.42
GTF2F1-206ENST00000598607 SLC1A4P43007 532 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms