RNA–Protein interactions for RNA: ENST00000596445.5

VRK3-211, Transcript of vaccinia related kinase 3, humanhuman

TSL 5

Gene VRK3, Length 840 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-211ENST00000596445 FAM43AQ8N2R8 423 aa9.84□□□□□ -0.83
VRK3-211ENST00000596445 ANKS1AQ92625 1134 aa9.84□□□□□ -0.83
VRK3-211ENST00000596445 LPAR1Q92633 364 aa9.84□□□□□ -0.83
VRK3-211ENST00000596445 ZSCAN10Q96SZ4 725 aaPredicted RBP9.84□□□□□ -0.83
VRK3-211ENST00000596445 ZKSCAN3Q9BRR0 538 aa9.84□□□□□ -0.83
VRK3-211ENST00000596445 UBAC1Q9BSL1 405 aa9.84□□□□□ -0.83
VRK3-211ENST00000596445 VCPKMTQ9H867 229 aa9.84□□□□□ -0.83
VRK3-211ENST00000596445 GOPCQ9HD26 462 aa9.84□□□□□ -0.83
VRK3-211ENST00000596445 WBP1LQ9NX94 342 aa9.84□□□□□ -0.83
VRK3-211ENST00000596445 AGTPBP1Q9UPW5 1226 aa9.84□□□□□ -0.83
VRK3-211ENST00000596445 SLC45A1Q9Y2W3 748 aa9.84□□□□□ -0.83
VRK3-211ENST00000596445 SNX14Q9Y5W7 946 aa9.84□□□□□ -0.83
VRK3-211ENST00000596445 PDHXO00330 501 aa9.83□□□□□ -0.84
VRK3-211ENST00000596445 CA12O43570 354 aa9.83□□□□□ -0.84
VRK3-211ENST00000596445 HMGB1P09429 215 aaKnown RBP9.83□□□□□ -0.84
VRK3-211ENST00000596445 TOP1P11387 765 aaKnown RBP9.83□□□□□ -0.84
VRK3-211ENST00000596445 VCAM1P19320 739 aa9.83□□□□□ -0.84
VRK3-211ENST00000596445 HOXA7P31268 230 aaPredicted RBP9.83□□□□□ -0.84
VRK3-211ENST00000596445 MCM5P33992 734 aa9.83□□□□□ -0.84
VRK3-211ENST00000596445 PABPC4Q13310 644 aaKnown RBP eCLIP9.83□□□□□ -0.84
VRK3-211ENST00000596445 SART3Q15020 963 aaKnown RBP9.83□□□□□ -0.84
VRK3-211ENST00000596445 ADCK5Q3MIX3 580 aa9.83□□□□□ -0.84
VRK3-211ENST00000596445 KIAA1755Q5JYT7 1200 aa9.83□□□□□ -0.84
VRK3-211ENST00000596445 TREML2Q5T2D2 321 aa9.83□□□□□ -0.84
VRK3-211ENST00000596445 ENAHQ8N8S7 591 aaPredicted RBP9.83□□□□□ -0.84
VRK3-211ENST00000596445 GMCL1P1Q8NEA9 526 aa9.83□□□□□ -0.84
VRK3-211ENST00000596445 NEK1Q96PY6 1258 aa9.83□□□□□ -0.84
VRK3-211ENST00000596445 MTA3Q9BTC8 594 aa9.83□□□□□ -0.84
VRK3-211ENST00000596445 BEGAINQ9BUH8 593 aa9.83□□□□□ -0.84
VRK3-211ENST00000596445 RNF186Q9NXI6 227 aa9.83□□□□□ -0.84
VRK3-211ENST00000596445 TNKSO95271 1327 aa9.82□□□□□ -0.84
VRK3-211ENST00000596445 ERICH2A1L162 156 aa9.82□□□□□ -0.84
VRK3-211ENST00000596445 USP17L15C9J2P7 530 aa9.82□□□□□ -0.84
VRK3-211ENST00000596445 USP17L13C9JLJ4 530 aa9.82□□□□□ -0.84
VRK3-211ENST00000596445 USP17L11C9JVI0 530 aa9.82□□□□□ -0.84
VRK3-211ENST00000596445 USP17L18D6R9N7 530 aa9.82□□□□□ -0.84
VRK3-211ENST00000596445 USP17L22D6RA61 530 aa9.82□□□□□ -0.84
VRK3-211ENST00000596445 USP17L17D6RBQ6 530 aa9.82□□□□□ -0.84
VRK3-211ENST00000596445 USP17L19D6RCP7 530 aa9.82□□□□□ -0.84
VRK3-211ENST00000596445 USP17L20D6RJB6 530 aa9.82□□□□□ -0.84
VRK3-211ENST00000596445 F5H6K3 240 aa9.82□□□□□ -0.84
VRK3-211ENST00000596445 IFIT3O14879 490 aaKnown RBP9.82□□□□□ -0.84
VRK3-211ENST00000596445 WDR46O15213 610 aaKnown RBP9.82□□□□□ -0.84
VRK3-211ENST00000596445 PRC1O43663 620 aa9.82□□□□□ -0.84
VRK3-211ENST00000596445 RAD21O60216 631 aa9.82□□□□□ -0.84
VRK3-211ENST00000596445 TRPA1O75762 1119 aa9.82□□□□□ -0.84
VRK3-211ENST00000596445 PSMA5P28066 241 aa9.82□□□□□ -0.84
VRK3-211ENST00000596445 ANTXR2P58335 489 aa9.82□□□□□ -0.84
VRK3-211ENST00000596445 ANAPC15P60006 121 aa9.82□□□□□ -0.84
VRK3-211ENST00000596445 KLRC3Q07444 240 aa9.82□□□□□ -0.84
VRK3-211ENST00000596445 USP17L24Q0WX57 530 aa9.82□□□□□ -0.84
VRK3-211ENST00000596445 SEC23AQ15436 765 aa9.82□□□□□ -0.84
VRK3-211ENST00000596445 IFIT1BQ5T764 474 aaKnown RBP9.82□□□□□ -0.84
VRK3-211ENST00000596445 SPICE1Q8N0Z3 855 aa9.82□□□□□ -0.84
VRK3-211ENST00000596445 LRRC47Q8N1G4 583 aaKnown RBP9.82□□□□□ -0.84
VRK3-211ENST00000596445 TMEM87BQ96K49 555 aa9.82□□□□□ -0.84
VRK3-211ENST00000596445 JAKMIP1Q96N16 626 aaKnown RBP9.82□□□□□ -0.84
VRK3-211ENST00000596445 TMEM47Q9BQJ4 181 aa9.82□□□□□ -0.84
VRK3-211ENST00000596445 CFHR5Q9BXR6 569 aa9.82□□□□□ -0.84
VRK3-211ENST00000596445 SAGE1Q9NXZ1 904 aa9.82□□□□□ -0.84
VRK3-211ENST00000596445 RLFQ13129 1914 aa9.82□□□□□ -0.84
VRK3-211ENST00000596445 PARP14Q460N5 1801 aa9.82□□□□□ -0.84
VRK3-211ENST00000596445 WDR19Q8NEZ3 1342 aa9.82□□□□□ -0.84
VRK3-211ENST00000596445 NDUFB10O96000 172 aa9.81□□□□□ -0.84
VRK3-211ENST00000596445 OSBPP22059 807 aa9.81□□□□□ -0.84
VRK3-211ENST00000596445 EXOSC10Q01780 885 aaKnown RBP9.81□□□□□ -0.84
VRK3-211ENST00000596445 COL9A3Q14050 684 aaPredicted RBP9.81□□□□□ -0.84
VRK3-211ENST00000596445 WTAPQ15007 396 aa9.81□□□□□ -0.84
VRK3-211ENST00000596445 TAF1CQ15572 869 aaPredicted RBP9.81□□□□□ -0.84
VRK3-211ENST00000596445 TMEM67Q5HYA8 995 aa9.81□□□□□ -0.84
VRK3-211ENST00000596445 SLFN13Q68D06 897 aa9.81□□□□□ -0.84
VRK3-211ENST00000596445 CATSPERGQ6ZRH7 1159 aa9.81□□□□□ -0.84
VRK3-211ENST00000596445 DHX32Q7L7V1 743 aaKnown RBP9.81□□□□□ -0.84
VRK3-211ENST00000596445 CHST3Q7LGC8 479 aa9.81□□□□□ -0.84
VRK3-211ENST00000596445 TMTC2Q8N394 836 aa9.81□□□□□ -0.84
VRK3-211ENST00000596445 IGDCC4Q8TDY8 1250 aa9.81□□□□□ -0.84
VRK3-211ENST00000596445 IL17RAQ96F46 866 aa9.81□□□□□ -0.84
VRK3-211ENST00000596445 GMCL1Q96IK5 515 aa9.81□□□□□ -0.84
VRK3-211ENST00000596445 PARK7Q99497 189 aaKnown RBP9.81□□□□□ -0.84
VRK3-211ENST00000596445 TM6SF1Q9BZW5 370 aa9.81□□□□□ -0.84
VRK3-211ENST00000596445 ASCC2Q9H1I8 757 aaPredicted RBP9.81□□□□□ -0.84
VRK3-211ENST00000596445 RPAP3Q9H6T3 665 aaPredicted RBP9.81□□□□□ -0.84
VRK3-211ENST00000596445 KAT14Q9H8E8 782 aa9.81□□□□□ -0.84
VRK3-211ENST00000596445 ZFYVE28Q9HCC9 887 aa9.81□□□□□ -0.84
VRK3-211ENST00000596445 PNMA3Q9UL41 463 aa9.81□□□□□ -0.84
VRK3-211ENST00000596445 CYP2C8P10632 490 aa9.8□□□□□ -0.84
VRK3-211ENST00000596445 CASTP20810 708 aaKnown RBP9.8□□□□□ -0.84
VRK3-211ENST00000596445 LIFRP42702 1097 aa9.8□□□□□ -0.84
VRK3-211ENST00000596445 IRX3P78415 501 aaPredicted RBP9.8□□□□□ -0.84
VRK3-211ENST00000596445 CRHR2Q13324 411 aa9.8□□□□□ -0.84
VRK3-211ENST00000596445 FAM83BQ5T0W9 1011 aa9.8□□□□□ -0.84
VRK3-211ENST00000596445 BLOC1S2Q6QNY1 142 aa9.8□□□□□ -0.84
VRK3-211ENST00000596445 PNMA1Q8ND90 353 aa9.8□□□□□ -0.84
VRK3-211ENST00000596445 DCAF4Q8WV16 495 aa9.8□□□□□ -0.84
VRK3-211ENST00000596445 NUP88Q99567 741 aaPredicted RBP9.8□□□□□ -0.84
VRK3-211ENST00000596445 BACH2Q9BYV9 841 aa9.8□□□□□ -0.84
VRK3-211ENST00000596445 TANGO6Q9C0B7 1094 aa9.8□□□□□ -0.84
VRK3-211ENST00000596445 UPF2Q9HAU5 1272 aaKnown RBP9.8□□□□□ -0.84
VRK3-211ENST00000596445 LY9Q9HBG7 655 aa9.8□□□□□ -0.84
VRK3-211ENST00000596445 ZSWIM6Q9HCJ5 1215 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms