RNA–Protein interactions for RNA: ENST00000596348.2

SCN1B-204, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 1,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-204ENST00000596348 DOCK3Q8IZD9 2030 aa17.76■□□□□ 0.43
SCN1B-204ENST00000596348 PARP14Q460N5 1801 aa17.75■□□□□ 0.43
SCN1B-204ENST00000596348 TSPY2A6NKD2 308 aa17.75■□□□□ 0.43
SCN1B-204ENST00000596348 USP17L15C9J2P7 530 aa17.75■□□□□ 0.43
SCN1B-204ENST00000596348 USP17L13C9JLJ4 530 aa17.75■□□□□ 0.43
SCN1B-204ENST00000596348 USP17L11C9JVI0 530 aa17.75■□□□□ 0.43
SCN1B-204ENST00000596348 USP17L18D6R9N7 530 aa17.75■□□□□ 0.43
SCN1B-204ENST00000596348 USP17L22D6RA61 530 aa17.75■□□□□ 0.43
SCN1B-204ENST00000596348 USP17L17D6RBQ6 530 aa17.75■□□□□ 0.43
SCN1B-204ENST00000596348 USP17L19D6RCP7 530 aa17.75■□□□□ 0.43
SCN1B-204ENST00000596348 USP17L20D6RJB6 530 aa17.75■□□□□ 0.43
SCN1B-204ENST00000596348 ZNF213O14771 459 aa17.75■□□□□ 0.43
SCN1B-204ENST00000596348 PEX10O60683 326 aa17.75■□□□□ 0.43
SCN1B-204ENST00000596348 HERVK_113P62684 666 aa17.75■□□□□ 0.43
SCN1B-204ENST00000596348 USP17L24Q0WX57 530 aa17.75■□□□□ 0.43
SCN1B-204ENST00000596348 RRP12Q5JTH9 1297 aaKnown RBP17.75■□□□□ 0.43
SCN1B-204ENST00000596348 CATSPERGQ6ZRH7 1159 aa17.75■□□□□ 0.43
SCN1B-204ENST00000596348 MFSD6Q6ZSS7 791 aa17.75■□□□□ 0.43
SCN1B-204ENST00000596348 ANKRD13CQ8N6S4 541 aa17.75■□□□□ 0.43
SCN1B-204ENST00000596348 MCOLN1Q9GZU1 580 aa17.75■□□□□ 0.43
SCN1B-204ENST00000596348 TOMM22Q9NS69 142 aa17.75■□□□□ 0.43
SCN1B-204ENST00000596348 CLIP2Q9UDT6 1046 aa17.75■□□□□ 0.43
SCN1B-204ENST00000596348 CTNNA3Q9UI47 895 aa17.75■□□□□ 0.43
SCN1B-204ENST00000596348 MGAMO43451 1857 aa17.75■□□□□ 0.43
SCN1B-204ENST00000596348 ECM2O94769 699 aaPredicted RBP17.74■□□□□ 0.43
SCN1B-204ENST00000596348 IMMTQ16891 758 aaKnown RBP17.74■□□□□ 0.43
SCN1B-204ENST00000596348 OTOP1Q7RTM1 612 aa17.74■□□□□ 0.43
SCN1B-204ENST00000596348 LPAR1Q92633 364 aa17.74■□□□□ 0.43
SCN1B-204ENST00000596348 TXNRD2Q9NNW7 524 aa17.74■□□□□ 0.43
SCN1B-204ENST00000596348 TAF6LQ9Y6J9 622 aa17.74■□□□□ 0.43
SCN1B-204ENST00000596348 CENPFP49454 3210 aa17.74■□□□□ 0.43
SCN1B-204ENST00000596348 CDC45O75419 566 aa17.73■□□□□ 0.43
SCN1B-204ENST00000596348 TTLL1O95922 423 aa17.73■□□□□ 0.43
SCN1B-204ENST00000596348 PCP11498 1178 aaKnown RBP17.73■□□□□ 0.43
SCN1B-204ENST00000596348 GCLCP48506 637 aaPredicted RBP17.73■□□□□ 0.43
SCN1B-204ENST00000596348 FAM110CQ1W6H9 321 aa17.73■□□□□ 0.43
SCN1B-204ENST00000596348 LRRC47Q8N1G4 583 aaKnown RBP17.73■□□□□ 0.43
SCN1B-204ENST00000596348 MAP4K1Q92918 833 aa17.73■□□□□ 0.43
SCN1B-204ENST00000596348 MKL1Q969V6 931 aa17.73■□□□□ 0.43
SCN1B-204ENST00000596348 TRIM47Q96LD4 638 aa17.73■□□□□ 0.43
SCN1B-204ENST00000596348 LSG1Q9H089 658 aaKnown RBP17.73■□□□□ 0.43
SCN1B-204ENST00000596348 RNF41Q9H4P4 317 aaPredicted RBP17.73■□□□□ 0.43
SCN1B-204ENST00000596348 GOPCQ9HD26 462 aa17.73■□□□□ 0.43
SCN1B-204ENST00000596348 TRIM17Q9Y577 477 aa17.73■□□□□ 0.43
SCN1B-204ENST00000596348 SPDYE16A6NNV3 312 aaPredicted RBP17.72■□□□□ 0.43
SCN1B-204ENST00000596348 WDR46O15213 610 aaKnown RBP17.72■□□□□ 0.43
SCN1B-204ENST00000596348 NDUFB10O96000 172 aa17.72■□□□□ 0.43
SCN1B-204ENST00000596348 CYP21A2P08686 494 aa17.72■□□□□ 0.43
SCN1B-204ENST00000596348 NOVP48745 357 aa17.72■□□□□ 0.43
SCN1B-204ENST00000596348 NUP88Q99567 741 aaPredicted RBP17.72■□□□□ 0.43
SCN1B-204ENST00000596348 TANGO6Q9C0B7 1094 aa17.72■□□□□ 0.43
SCN1B-204ENST00000596348 EFCC1Q9HA90 598 aa17.72■□□□□ 0.43
SCN1B-204ENST00000596348 RBPJLQ9UBG7 517 aa17.72■□□□□ 0.43
SCN1B-204ENST00000596348 MORF4L1Q9UBU8 362 aa17.72■□□□□ 0.43
SCN1B-204ENST00000596348 U3KPZ7 1027 aaPredicted RBP17.72■□□□□ 0.43
SCN1B-204ENST00000596348 A0A0G2JMZ2 1700 aa17.72■□□□□ 0.43
SCN1B-204ENST00000596348 F5H6K3 240 aa17.71■□□□□ 0.43
SCN1B-204ENST00000596348 RAD21O60216 631 aa17.71■□□□□ 0.43
SCN1B-204ENST00000596348 CNMDO75829 334 aa17.71■□□□□ 0.43
SCN1B-204ENST00000596348 PSMC4P43686 418 aa17.71■□□□□ 0.43
SCN1B-204ENST00000596348 KLRC3Q07444 240 aa17.71■□□□□ 0.43
SCN1B-204ENST00000596348 FAM83BQ5T0W9 1011 aa17.71■□□□□ 0.43
SCN1B-204ENST00000596348 SYNPO2Q9UMS6 1093 aa17.71■□□□□ 0.43
SCN1B-204ENST00000596348 RBM8AQ9Y5S9 174 aaKnown RBP17.71■□□□□ 0.43
SCN1B-204ENST00000596348 B4E1Z4 1266 aa17.7■□□□□ 0.42
SCN1B-204ENST00000596348 KDM4AO75164 1064 aa17.7■□□□□ 0.42
SCN1B-204ENST00000596348 KIF22Q14807 665 aa17.7■□□□□ 0.42
SCN1B-204ENST00000596348 LBX2Q6XYB7 198 aa17.7■□□□□ 0.42
SCN1B-204ENST00000596348 ESR2Q92731 530 aa17.7■□□□□ 0.42
SCN1B-204ENST00000596348 PAGR1Q9BTK6 254 aa17.7■□□□□ 0.42
SCN1B-204ENST00000596348 TCP11L1Q9NUJ3 509 aa17.7■□□□□ 0.42
SCN1B-204ENST00000596348 FBXO28Q9NVF7 368 aa17.7■□□□□ 0.42
SCN1B-204ENST00000596348 STX8Q9UNK0 236 aa17.7■□□□□ 0.42
SCN1B-204ENST00000596348 FLOT1O75955 427 aa17.69■□□□□ 0.42
SCN1B-204ENST00000596348 COG2Q14746 738 aa17.69■□□□□ 0.42
SCN1B-204ENST00000596348 Q3C1V9 767 aa17.69■□□□□ 0.42
SCN1B-204ENST00000596348 RCSD1Q6JBY9 416 aa17.69■□□□□ 0.42
SCN1B-204ENST00000596348 KIAA1211Q6ZU35 1233 aa17.69■□□□□ 0.42
SCN1B-204ENST00000596348 STOX1Q6ZVD7 989 aa17.69■□□□□ 0.42
SCN1B-204ENST00000596348 RASGRP2Q7LDG7 609 aa17.69■□□□□ 0.42
SCN1B-204ENST00000596348 GMCL1P1Q8NEA9 526 aa17.69■□□□□ 0.42
SCN1B-204ENST00000596348 ANO2Q9NQ90 1003 aa17.69■□□□□ 0.42
SCN1B-204ENST00000596348 BTBD7Q9P203 1132 aa17.69■□□□□ 0.42
SCN1B-204ENST00000596348 COL11A1P12107 1806 aaPredicted RBP17.69■□□□□ 0.42
SCN1B-204ENST00000596348 DSG3P32926 999 aa17.68■□□□□ 0.42
SCN1B-204ENST00000596348 ERVK-9P63128 1117 aa17.68■□□□□ 0.42
SCN1B-204ENST00000596348 ERVK-24P63145 666 aa17.68■□□□□ 0.42
SCN1B-204ENST00000596348 PKN2Q16513 984 aaKnown RBP17.68■□□□□ 0.42
SCN1B-204ENST00000596348 PPP4R3BQ5MIZ7 849 aa17.68■□□□□ 0.42
SCN1B-204ENST00000596348 FBXO46Q6PJ61 603 aaPredicted RBP17.68■□□□□ 0.42
SCN1B-204ENST00000596348 GTF3C2Q8WUA4 911 aaPredicted RBP17.68■□□□□ 0.42
SCN1B-204ENST00000596348 ATG4CQ96DT6 458 aa17.68■□□□□ 0.42
SCN1B-204ENST00000596348 ABHD8Q96I13 439 aa17.68■□□□□ 0.42
SCN1B-204ENST00000596348 ZKSCAN3Q9BRR0 538 aa17.68■□□□□ 0.42
SCN1B-204ENST00000596348 ZSWIM5Q9P217 1185 aa17.68■□□□□ 0.42
SCN1B-204ENST00000596348 PTPN22Q9Y2R2 807 aa17.68■□□□□ 0.42
SCN1B-204ENST00000596348 RABGAP1Q9Y3P9 1069 aa17.68■□□□□ 0.42
SCN1B-204ENST00000596348 FMNL1O95466 1100 aaPredicted RBP17.67■□□□□ 0.42
SCN1B-204ENST00000596348 FCGRTP55899 365 aa17.67■□□□□ 0.42
SCN1B-204ENST00000596348 SLFN13Q68D06 897 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms