RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 ZKSCAN3Q9BRR0 538 aa22.77■■□□□ 1.24
PNKP-207ENST00000596014 VCPKMTQ9H867 229 aa22.77■■□□□ 1.24
PNKP-207ENST00000596014 SLC45A1Q9Y2W3 748 aa22.77■■□□□ 1.24
PNKP-207ENST00000596014 TSGA10IPQ3SY00 556 aa22.76■■□□□ 1.23
PNKP-207ENST00000596014 TBC1D8O95759 1140 aa22.75■■□□□ 1.23
PNKP-207ENST00000596014 ZKSCAN1P17029 563 aaPredicted RBP22.75■■□□□ 1.23
PNKP-207ENST00000596014 VCAM1P19320 739 aa22.75■■□□□ 1.23
PNKP-207ENST00000596014 TAF1CQ15572 869 aaPredicted RBP22.75■■□□□ 1.23
PNKP-207ENST00000596014 C8orf34Q49A92 452 aa22.75■■□□□ 1.23
PNKP-207ENST00000596014 CYB5R4Q7L1T6 521 aa22.75■■□□□ 1.23
PNKP-207ENST00000596014 LPAR1Q92633 364 aa22.75■■□□□ 1.23
PNKP-207ENST00000596014 KCNB2Q92953 911 aa22.75■■□□□ 1.23
PNKP-207ENST00000596014 TTC14Q96N46 770 aa22.75■■□□□ 1.23
PNKP-207ENST00000596014 CFHR5Q9BXR6 569 aa22.75■■□□□ 1.23
PNKP-207ENST00000596014 GOPCQ9HD26 462 aa22.75■■□□□ 1.23
PNKP-207ENST00000596014 SYNPO2Q9UMS6 1093 aa22.75■■□□□ 1.23
PNKP-207ENST00000596014 HOXA7P31268 230 aaPredicted RBP22.74■■□□□ 1.23
PNKP-207ENST00000596014 PABPC4Q13310 644 aaKnown RBP eCLIP22.74■■□□□ 1.23
PNKP-207ENST00000596014 CRHR2Q13324 411 aa22.74■■□□□ 1.23
PNKP-207ENST00000596014 RCSD1Q6JBY9 416 aa22.74■■□□□ 1.23
PNKP-207ENST00000596014 SPICE1Q8N0Z3 855 aa22.74■■□□□ 1.23
PNKP-207ENST00000596014 LRRC47Q8N1G4 583 aaKnown RBP22.74■■□□□ 1.23
PNKP-207ENST00000596014 ZSCAN10Q96SZ4 725 aaPredicted RBP22.74■■□□□ 1.23
PNKP-207ENST00000596014 R3HDMLQ9H3Y0 253 aa22.74■■□□□ 1.23
PNKP-207ENST00000596014 F5H6K3 240 aa22.74■■□□□ 1.23
PNKP-207ENST00000596014 EIF5BO60841 1220 aaKnown RBP22.74■■□□□ 1.23
PNKP-207ENST00000596014 SEC24BO95487 1268 aa22.74■■□□□ 1.23
PNKP-207ENST00000596014 KLRC3Q07444 240 aa22.74■■□□□ 1.23
PNKP-207ENST00000596014 CCDC178Q5BJE1 867 aa22.74■■□□□ 1.23
PNKP-207ENST00000596014 MB21D2Q8IYB1 491 aaPredicted RBP22.74■■□□□ 1.23
PNKP-207ENST00000596014 TSKSQ9UJT2 592 aa22.74■■□□□ 1.23
PNKP-207ENST00000596014 FOXN1O15353 648 aa22.73■■□□□ 1.23
PNKP-207ENST00000596014 RAD21O60216 631 aa22.73■■□□□ 1.23
PNKP-207ENST00000596014 CYP2C8P10632 490 aa22.73■■□□□ 1.23
PNKP-207ENST00000596014 DGKHQ86XP1 1220 aa22.73■■□□□ 1.23
PNKP-207ENST00000596014 TMEM47Q9BQJ4 181 aa22.73■■□□□ 1.23
PNKP-207ENST00000596014 UBAC1Q9BSL1 405 aa22.73■■□□□ 1.23
PNKP-207ENST00000596014 ZFYVE28Q9HCC9 887 aa22.73■■□□□ 1.23
PNKP-207ENST00000596014 TOP1P11387 765 aaKnown RBP22.72■■□□□ 1.23
PNKP-207ENST00000596014 ENAHQ8N8S7 591 aaPredicted RBP22.72■■□□□ 1.23
PNKP-207ENST00000596014 GMCL1P1Q8NEA9 526 aa22.72■■□□□ 1.23
PNKP-207ENST00000596014 PARK7Q99497 189 aaKnown RBP22.72■■□□□ 1.23
PNKP-207ENST00000596014 RPAP3Q9H6T3 665 aaPredicted RBP22.72■■□□□ 1.23
PNKP-207ENST00000596014 PNMA3Q9UL41 463 aa22.72■■□□□ 1.23
PNKP-207ENST00000596014 USP17L15C9J2P7 530 aa22.71■■□□□ 1.23
PNKP-207ENST00000596014 USP17L13C9JLJ4 530 aa22.71■■□□□ 1.23
PNKP-207ENST00000596014 USP17L11C9JVI0 530 aa22.71■■□□□ 1.23
PNKP-207ENST00000596014 USP17L18D6R9N7 530 aa22.71■■□□□ 1.23
PNKP-207ENST00000596014 USP17L22D6RA61 530 aa22.71■■□□□ 1.23
PNKP-207ENST00000596014 USP17L17D6RBQ6 530 aa22.71■■□□□ 1.23
PNKP-207ENST00000596014 USP17L19D6RCP7 530 aa22.71■■□□□ 1.23
PNKP-207ENST00000596014 USP17L20D6RJB6 530 aa22.71■■□□□ 1.23
PNKP-207ENST00000596014 NDUFB10O96000 172 aa22.71■■□□□ 1.23
PNKP-207ENST00000596014 OSBPP22059 807 aa22.71■■□□□ 1.23
PNKP-207ENST00000596014 USP17L24Q0WX57 530 aa22.71■■□□□ 1.23
PNKP-207ENST00000596014 COL9A3Q14050 684 aaPredicted RBP22.71■■□□□ 1.23
PNKP-207ENST00000596014 KRT32Q14532 448 aa22.71■■□□□ 1.23
PNKP-207ENST00000596014 CATSPERGQ6ZRH7 1159 aa22.71■■□□□ 1.23
PNKP-207ENST00000596014 CHST3Q7LGC8 479 aa22.71■■□□□ 1.23
PNKP-207ENST00000596014 ANKS1AQ92625 1134 aa22.71■■□□□ 1.23
PNKP-207ENST00000596014 ASCC2Q9H1I8 757 aaPredicted RBP22.71■■□□□ 1.23
PNKP-207ENST00000596014 SNX14Q9Y5W7 946 aa22.71■■□□□ 1.23
PNKP-207ENST00000596014 TNKSO95271 1327 aa22.71■■□□□ 1.23
PNKP-207ENST00000596014 WDR46O15213 610 aaKnown RBP22.71■■□□□ 1.23
PNKP-207ENST00000596014 ANTXR2P58335 489 aa22.71■■□□□ 1.23
PNKP-207ENST00000596014 ADCK5Q3MIX3 580 aa22.71■■□□□ 1.23
PNKP-207ENST00000596014 NEK1Q96PY6 1258 aa22.71■■□□□ 1.23
PNKP-207ENST00000596014 TLR2O60603 784 aa22.7■■□□□ 1.22
PNKP-207ENST00000596014 MCM5P33992 734 aa22.7■■□□□ 1.22
PNKP-207ENST00000596014 IRX3P78415 501 aaPredicted RBP22.7■■□□□ 1.22
PNKP-207ENST00000596014 SLFN13Q68D06 897 aa22.7■■□□□ 1.22
PNKP-207ENST00000596014 MCCP23508 829 aa22.69■■□□□ 1.22
PNKP-207ENST00000596014 SEC23AQ15436 765 aa22.69■■□□□ 1.22
PNKP-207ENST00000596014 P2RX7Q99572 595 aaKnown RBP22.69■■□□□ 1.22
PNKP-207ENST00000596014 TANGO6Q9C0B7 1094 aa22.69■■□□□ 1.22
PNKP-207ENST00000596014 IFIT3O14879 490 aaKnown RBP22.68■■□□□ 1.22
PNKP-207ENST00000596014 HSPA8P11142 646 aaKnown RBP22.68■■□□□ 1.22
PNKP-207ENST00000596014 CTCFP49711 727 aaPredicted RBP22.68■■□□□ 1.22
PNKP-207ENST00000596014 FAM83BQ5T0W9 1011 aa22.68■■□□□ 1.22
PNKP-207ENST00000596014 SMCR8Q8TEV9 937 aaPredicted RBP22.68■■□□□ 1.22
PNKP-207ENST00000596014 NUP88Q99567 741 aaPredicted RBP22.68■■□□□ 1.22
PNKP-207ENST00000596014 RLFQ13129 1914 aa22.68■■□□□ 1.22
PNKP-207ENST00000596014 ADGRA2Q96PE1 1338 aa22.68■■□□□ 1.22
PNKP-207ENST00000596014 PRC1O43663 620 aa22.68■■□□□ 1.22
PNKP-207ENST00000596014 SART3Q15020 963 aaKnown RBP22.68■■□□□ 1.22
PNKP-207ENST00000596014 ERICH2A1L162 156 aa22.67■■□□□ 1.22
PNKP-207ENST00000596014 GPR25O00155 361 aa22.67■■□□□ 1.22
PNKP-207ENST00000596014 COG2Q14746 738 aa22.67■■□□□ 1.22
PNKP-207ENST00000596014 IFIT1BQ5T764 474 aaKnown RBP22.67■■□□□ 1.22
PNKP-207ENST00000596014 C17orf99Q6UX52 265 aa22.67■■□□□ 1.22
PNKP-207ENST00000596014 IGDCC4Q8TDY8 1250 aa22.67■■□□□ 1.22
PNKP-207ENST00000596014 CHMP4CQ96CF2 233 aa22.67■■□□□ 1.22
PNKP-207ENST00000596014 GMCL1Q96IK5 515 aa22.67■■□□□ 1.22
PNKP-207ENST00000596014 MTA3Q9BTC8 594 aa22.67■■□□□ 1.22
PNKP-207ENST00000596014 KAT14Q9H8E8 782 aa22.67■■□□□ 1.22
PNKP-207ENST00000596014 MTMR7Q9Y216 660 aa22.67■■□□□ 1.22
PNKP-207ENST00000596014 PARP14Q460N5 1801 aa22.67■■□□□ 1.22
PNKP-207ENST00000596014 BMP3P12645 472 aa22.66■■□□□ 1.22
PNKP-207ENST00000596014 HERVK_113P62684 666 aa22.66■■□□□ 1.22
PNKP-207ENST00000596014 NOM1Q5C9Z4 860 aaKnown RBP22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms