RNA–Protein interactions for RNA: ENST00000595756.1

HOMER3-208, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-208ENST00000595756 NECAB2Q7Z6G3 386 aa21.52■■□□□ 1.04
HOMER3-208ENST00000595756 LPAR1Q92633 364 aa21.52■■□□□ 1.04
HOMER3-208ENST00000595756 CCDC17Q96LX7 622 aa21.52■■□□□ 1.04
HOMER3-208ENST00000595756 PUS7LQ9H0K6 701 aaKnown RBP21.52■■□□□ 1.04
HOMER3-208ENST00000595756 SH2D4AQ9H788 454 aa21.52■■□□□ 1.04
HOMER3-208ENST00000595756 ARHGEF10LQ9HCE6 1279 aa21.52■■□□□ 1.04
HOMER3-208ENST00000595756 BTBD7Q9P203 1132 aa21.52■■□□□ 1.04
HOMER3-208ENST00000595756 SLC4A4Q9Y6R1 1079 aa21.52■■□□□ 1.04
HOMER3-208ENST00000595756 AKR1B1P15121 316 aa21.51■■□□□ 1.03
HOMER3-208ENST00000595756 FXR1P51114 621 aaKnown RBP eCLIP21.51■■□□□ 1.03
HOMER3-208ENST00000595756 ICA1Q05084 483 aa21.51■■□□□ 1.03
HOMER3-208ENST00000595756 MAP2K5Q13163 448 aa21.51■■□□□ 1.03
HOMER3-208ENST00000595756 CHRDL2Q6WN34 429 aa21.51■■□□□ 1.03
HOMER3-208ENST00000595756 EXOC6Q8TAG9 804 aa21.51■■□□□ 1.03
HOMER3-208ENST00000595756 PAWRQ96IZ0 340 aaKnown RBP21.51■■□□□ 1.03
HOMER3-208ENST00000595756 ARPP21Q9UBL0 812 aaPredicted RBP21.51■■□□□ 1.03
HOMER3-208ENST00000595756 OGDHLQ9ULD0 1010 aa21.51■■□□□ 1.03
HOMER3-208ENST00000595756 PCDHB15Q9Y5E8 787 aa21.51■■□□□ 1.03
HOMER3-208ENST00000595756 SLC15A5A6NIM6 579 aa21.5■■□□□ 1.03
HOMER3-208ENST00000595756 USP17L12C9JPN9 530 aa21.5■■□□□ 1.03
HOMER3-208ENST00000595756 USP17L21D6R901 530 aa21.5■■□□□ 1.03
HOMER3-208ENST00000595756 CDK8P49336 464 aa21.5■■□□□ 1.03
HOMER3-208ENST00000595756 KBTBD3Q8NAB2 608 aa21.5■■□□□ 1.03
HOMER3-208ENST00000595756 DIS3LQ8TF46 1054 aaKnown RBP21.5■■□□□ 1.03
HOMER3-208ENST00000595756 TANGO6Q9C0B7 1094 aa21.5■■□□□ 1.03
HOMER3-208ENST00000595756 CYP2D7A0A087X1C5 515 aa21.49■■□□□ 1.03
HOMER3-208ENST00000595756 EVI5O60447 810 aa21.49■■□□□ 1.03
HOMER3-208ENST00000595756 PTPREP23469 700 aa21.49■■□□□ 1.03
HOMER3-208ENST00000595756 CACNB2Q08289 660 aaPredicted RBP21.49■■□□□ 1.03
HOMER3-208ENST00000595756 GRB14Q14449 540 aa21.49■■□□□ 1.03
HOMER3-208ENST00000595756 COG2Q14746 738 aa21.49■■□□□ 1.03
HOMER3-208ENST00000595756 CCL14Q16627 93 aa21.49■■□□□ 1.03
HOMER3-208ENST00000595756 VCPKMTQ9H867 229 aa21.49■■□□□ 1.03
HOMER3-208ENST00000595756 TMX2Q9Y320 296 aa21.49■■□□□ 1.03
HOMER3-208ENST00000595756 IVNS1ABPQ9Y6Y0 642 aa21.49■■□□□ 1.03
HOMER3-208ENST00000595756 LAMA3Q16787 3333 aa21.49■■□□□ 1.03
HOMER3-208ENST00000595756 ROBO3Q96MS0 1386 aa21.48■■□□□ 1.03
HOMER3-208ENST00000595756 COL11A1P12107 1806 aaPredicted RBP21.48■■□□□ 1.03
HOMER3-208ENST00000595756 HOXC6P09630 235 aa21.48■■□□□ 1.03
HOMER3-208ENST00000595756 MNX1P50219 401 aaPredicted RBP21.48■■□□□ 1.03
HOMER3-208ENST00000595756 WDR78Q5VTH9 848 aa21.48■■□□□ 1.03
HOMER3-208ENST00000595756 CTR9Q6PD62 1173 aa21.48■■□□□ 1.03
HOMER3-208ENST00000595756 CLEC10AQ8IUN9 316 aa21.48■■□□□ 1.03
HOMER3-208ENST00000595756 MB21D1Q8N884 522 aa21.48■■□□□ 1.03
HOMER3-208ENST00000595756 HOXC10Q9NYD6 342 aa21.48■■□□□ 1.03
HOMER3-208ENST00000595756 SMIM22K7EJ46 135 aa21.47■■□□□ 1.03
HOMER3-208ENST00000595756 WDR46O15213 610 aaKnown RBP21.47■■□□□ 1.03
HOMER3-208ENST00000595756 HDAC1Q13547 482 aaPredicted RBP21.47■■□□□ 1.03
HOMER3-208ENST00000595756 KIAA1755Q5JYT7 1200 aa21.47■■□□□ 1.03
HOMER3-208ENST00000595756 GIMAP6Q6P9H5 292 aa21.47■■□□□ 1.03
HOMER3-208ENST00000595756 SIAH1Q8IUQ4 282 aa21.47■■□□□ 1.03
HOMER3-208ENST00000595756 APPBP2Q92624 585 aa21.47■■□□□ 1.03
HOMER3-208ENST00000595756 STRBPQ96SI9 672 aaKnown RBP21.47■■□□□ 1.03
HOMER3-208ENST00000595756 NBPF3Q9H094 633 aa21.47■■□□□ 1.03
HOMER3-208ENST00000595756 PRO3102Q9H379 93 aa21.47■■□□□ 1.03
HOMER3-208ENST00000595756 DNAH12Q6ZR08 3092 aa21.46■■□□□ 1.03
HOMER3-208ENST00000595756 ZFYP08048 801 aaPredicted RBP21.46■■□□□ 1.03
HOMER3-208ENST00000595756 SBK1Q52WX2 424 aa21.46■■□□□ 1.03
HOMER3-208ENST00000595756 TSHZ3Q63HK5 1081 aa21.46■■□□□ 1.03
HOMER3-208ENST00000595756 SHCBP1Q8NEM2 672 aa21.46■■□□□ 1.03
HOMER3-208ENST00000595756 SPATC1LQ9H0A9 340 aa21.46■■□□□ 1.03
HOMER3-208ENST00000595756 RWDD1Q9H446 243 aaPredicted RBP21.46■■□□□ 1.03
HOMER3-208ENST00000595756 C11orf49Q9H6J7 331 aa21.46■■□□□ 1.03
HOMER3-208ENST00000595756 TTC41PQ6P2S7 1318 aa21.46■■□□□ 1.03
HOMER3-208ENST00000595756 CCND3P30281 292 aaPredicted RBP21.45■■□□□ 1.02
HOMER3-208ENST00000595756 DSG3P32926 999 aa21.45■■□□□ 1.02
HOMER3-208ENST00000595756 MOV10L1Q9BXT6 1211 aaKnown RBP21.45■■□□□ 1.02
HOMER3-208ENST00000595756 KANSL2Q9H9L4 492 aa21.45■■□□□ 1.02
HOMER3-208ENST00000595756 RBM27Q9P2N5 1060 aaKnown RBP21.45■■□□□ 1.02
HOMER3-208ENST00000595756 GSG1L2A8MUP6 293 aa21.44■■□□□ 1.02
HOMER3-208ENST00000595756 RNF113AO15541 343 aaKnown RBP21.44■■□□□ 1.02
HOMER3-208ENST00000595756 FLOT1O75955 427 aa21.44■■□□□ 1.02
HOMER3-208ENST00000595756 MFSD14CQ5VZR4 134 aa21.44■■□□□ 1.02
HOMER3-208ENST00000595756 LHX8Q68G74 356 aa21.44■■□□□ 1.02
HOMER3-208ENST00000595756 SPICE1Q8N0Z3 855 aa21.44■■□□□ 1.02
HOMER3-208ENST00000595756 OSBP2Q969R2 916 aa21.44■■□□□ 1.02
HOMER3-208ENST00000595756 FLRT1Q9NZU1 646 aa21.44■■□□□ 1.02
HOMER3-208ENST00000595756 MYH4Q9Y623 1939 aa21.44■■□□□ 1.02
HOMER3-208ENST00000595756 STRNO43815 780 aa21.43■■□□□ 1.02
HOMER3-208ENST00000595756 EEF2P13639 858 aaKnown RBP21.43■■□□□ 1.02
HOMER3-208ENST00000595756 GNAT2P19087 354 aa21.43■■□□□ 1.02
HOMER3-208ENST00000595756 IRX6P78412 446 aaPredicted RBP21.43■■□□□ 1.02
HOMER3-208ENST00000595756 LRRFIP1Q32MZ4 808 aaKnown RBP21.43■■□□□ 1.02
HOMER3-208ENST00000595756 A0A1W2PPC1 479 aa21.42■■□□□ 1.02
HOMER3-208ENST00000595756 PFASO15067 1338 aa21.42■■□□□ 1.02
HOMER3-208ENST00000595756 ERC2O15083 957 aa21.42■■□□□ 1.02
HOMER3-208ENST00000595756 GPAA1O43292 621 aa21.42■■□□□ 1.02
HOMER3-208ENST00000595756 IGHA2P01877 340 aa21.42■■□□□ 1.02
HOMER3-208ENST00000595756 ATG4CQ96DT6 458 aa21.42■■□□□ 1.02
HOMER3-208ENST00000595756 MROH8Q9H579 483 aa21.42■■□□□ 1.02
HOMER3-208ENST00000595756 GOPCQ9HD26 462 aa21.42■■□□□ 1.02
HOMER3-208ENST00000595756 ZBTB47Q9UFB7 747 aaPredicted RBP21.42■■□□□ 1.02
HOMER3-208ENST00000595756 MSCO60682 206 aa21.41■■□□□ 1.02
HOMER3-208ENST00000595756 COL6A1P12109 1028 aa21.41■■□□□ 1.02
HOMER3-208ENST00000595756 ERCC3P19447 782 aa21.41■■□□□ 1.02
HOMER3-208ENST00000595756 ADORA2AP29274 412 aa21.41■■□□□ 1.02
HOMER3-208ENST00000595756 ATP2B2Q01814 1243 aa21.41■■□□□ 1.02
HOMER3-208ENST00000595756 OLFML2BQ68BL8 750 aa21.41■■□□□ 1.02
HOMER3-208ENST00000595756 ABRAQ8N0Z2 381 aa21.41■■□□□ 1.02
HOMER3-208ENST00000595756 NPLOC4Q8TAT6 608 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms