RNA–Protein interactions for RNA: ENST00000595681.5

SH2D3A-204, Transcript of SH2 domain containing 3A, humanhuman

TSL 5

Gene SH2D3A, Length 1,750 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-204ENST00000595681 VCPKMTQ9H867 229 aa24.69■■□□□ 1.54
SH2D3A-204ENST00000595681 LAMA4Q16363 1823 aa24.69■■□□□ 1.54
SH2D3A-204ENST00000595681 USP17L15C9J2P7 530 aa24.68■■□□□ 1.54
SH2D3A-204ENST00000595681 USP17L13C9JLJ4 530 aa24.68■■□□□ 1.54
SH2D3A-204ENST00000595681 USP17L11C9JVI0 530 aa24.68■■□□□ 1.54
SH2D3A-204ENST00000595681 USP17L18D6R9N7 530 aa24.68■■□□□ 1.54
SH2D3A-204ENST00000595681 USP17L22D6RA61 530 aa24.68■■□□□ 1.54
SH2D3A-204ENST00000595681 USP17L17D6RBQ6 530 aa24.68■■□□□ 1.54
SH2D3A-204ENST00000595681 USP17L19D6RCP7 530 aa24.68■■□□□ 1.54
SH2D3A-204ENST00000595681 USP17L20D6RJB6 530 aa24.68■■□□□ 1.54
SH2D3A-204ENST00000595681 USP17L24Q0WX57 530 aa24.68■■□□□ 1.54
SH2D3A-204ENST00000595681 MTMR4Q9NYA4 1195 aa24.68■■□□□ 1.54
SH2D3A-204ENST00000595681 PLIN4Q96Q06 1357 aa24.68■■□□□ 1.54
SH2D3A-204ENST00000595681 RANBP6O60518 1105 aaKnown RBP24.67■■□□□ 1.54
SH2D3A-204ENST00000595681 NMT2O60551 498 aa24.67■■□□□ 1.54
SH2D3A-204ENST00000595681 CLIP2Q9UDT6 1046 aa24.67■■□□□ 1.54
SH2D3A-204ENST00000595681 ZNF213O14771 459 aa24.67■■□□□ 1.54
SH2D3A-204ENST00000595681 ORC4O43929 436 aa24.67■■□□□ 1.54
SH2D3A-204ENST00000595681 CAPN15O75808 1086 aa24.67■■□□□ 1.54
SH2D3A-204ENST00000595681 GCLCP48506 637 aaPredicted RBP24.67■■□□□ 1.54
SH2D3A-204ENST00000595681 PKN2Q16513 984 aaKnown RBP24.67■■□□□ 1.54
SH2D3A-204ENST00000595681 FAM110CQ1W6H9 321 aa24.67■■□□□ 1.54
SH2D3A-204ENST00000595681 FBXO46Q6PJ61 603 aaPredicted RBP24.67■■□□□ 1.54
SH2D3A-204ENST00000595681 SH2D4AQ9H788 454 aa24.67■■□□□ 1.54
SH2D3A-204ENST00000595681 IL17RBQ9NRM6 502 aa24.67■■□□□ 1.54
SH2D3A-204ENST00000595681 NYAP2Q9P242 653 aa24.67■■□□□ 1.54
SH2D3A-204ENST00000595681 RBPJLQ9UBG7 517 aa24.67■■□□□ 1.54
SH2D3A-204ENST00000595681 PTPN22Q9Y2R2 807 aa24.67■■□□□ 1.54
SH2D3A-204ENST00000595681 MYH4Q9Y623 1939 aa24.66■■□□□ 1.54
SH2D3A-204ENST00000595681 TSPY2A6NKD2 308 aa24.66■■□□□ 1.54
SH2D3A-204ENST00000595681 RAD21O60216 631 aa24.66■■□□□ 1.54
SH2D3A-204ENST00000595681 KIF22Q14807 665 aa24.66■■□□□ 1.54
SH2D3A-204ENST00000595681 HPS5Q9UPZ3 1129 aa24.66■■□□□ 1.54
SH2D3A-204ENST00000595681 LPAR1Q92633 364 aa24.65■■□□□ 1.54
SH2D3A-204ENST00000595681 ESYT1Q9BSJ8 1104 aa24.65■■□□□ 1.54
SH2D3A-204ENST00000595681 TANGO6Q9C0B7 1094 aa24.65■■□□□ 1.54
SH2D3A-204ENST00000595681 NEDD4P46934 1319 aa24.65■■□□□ 1.54
SH2D3A-204ENST00000595681 FMNL1O95466 1100 aaPredicted RBP24.65■■□□□ 1.54
SH2D3A-204ENST00000595681 AKNAD1Q5T1N1 836 aa24.65■■□□□ 1.54
SH2D3A-204ENST00000595681 LRRC47Q8N1G4 583 aaKnown RBP24.65■■□□□ 1.54
SH2D3A-204ENST00000595681 STAG1Q8WVM7 1258 aa24.65■■□□□ 1.54
SH2D3A-204ENST00000595681 MORF4L1Q9UBU8 362 aa24.65■■□□□ 1.54
SH2D3A-204ENST00000595681 SPDYE16A6NNV3 312 aaPredicted RBP24.64■■□□□ 1.53
SH2D3A-204ENST00000595681 Q3C1V9 767 aa24.64■■□□□ 1.53
SH2D3A-204ENST00000595681 IFFO2Q5TF58 517 aa24.64■■□□□ 1.53
SH2D3A-204ENST00000595681 MFSD6Q6ZSS7 791 aa24.64■■□□□ 1.53
SH2D3A-204ENST00000595681 NUP88Q99567 741 aaPredicted RBP24.64■■□□□ 1.53
SH2D3A-204ENST00000595681 PAGR1Q9BTK6 254 aa24.64■■□□□ 1.53
SH2D3A-204ENST00000595681 CNMDO75829 334 aa24.63■■□□□ 1.53
SH2D3A-204ENST00000595681 TTLL1O95922 423 aa24.63■■□□□ 1.53
SH2D3A-204ENST00000595681 IMMTQ16891 758 aaKnown RBP24.63■■□□□ 1.53
SH2D3A-204ENST00000595681 PTCH2Q9Y6C5 1203 aa24.63■■□□□ 1.53
SH2D3A-204ENST00000595681 F5H6K3 240 aa24.62■■□□□ 1.53
SH2D3A-204ENST00000595681 NDUFB10O96000 172 aa24.62■■□□□ 1.53
SH2D3A-204ENST00000595681 FCGRTP55899 365 aa24.62■■□□□ 1.53
SH2D3A-204ENST00000595681 KLRC3Q07444 240 aa24.62■■□□□ 1.53
SH2D3A-204ENST00000595681 MKL1Q969V6 931 aa24.62■■□□□ 1.53
SH2D3A-204ENST00000595681 GOPCQ9HD26 462 aa24.62■■□□□ 1.53
SH2D3A-204ENST00000595681 FBXO28Q9NVF7 368 aa24.62■■□□□ 1.53
SH2D3A-204ENST00000595681 CTNNA3Q9UI47 895 aa24.62■■□□□ 1.53
SH2D3A-204ENST00000595681 WDR46O15213 610 aaKnown RBP24.62■■□□□ 1.53
SH2D3A-204ENST00000595681 FAM83BQ5T0W9 1011 aa24.62■■□□□ 1.53
SH2D3A-204ENST00000595681 CHMP4CQ96CF2 233 aa24.62■■□□□ 1.53
SH2D3A-204ENST00000595681 BTBD7Q9P203 1132 aa24.62■■□□□ 1.53
SH2D3A-204ENST00000595681 BRCA2P51587 3418 aa24.61■■□□□ 1.53
SH2D3A-204ENST00000595681 CDC45O75419 566 aa24.61■■□□□ 1.53
SH2D3A-204ENST00000595681 COG2Q14746 738 aa24.61■■□□□ 1.53
SH2D3A-204ENST00000595681 ARHGEF6Q15052 776 aa24.61■■□□□ 1.53
SH2D3A-204ENST00000595681 GPRC5AQ8NFJ5 357 aa24.61■■□□□ 1.53
SH2D3A-204ENST00000595681 SRRDQ9UH36 339 aa24.61■■□□□ 1.53
SH2D3A-204ENST00000595681 GABRQQ9UN88 632 aa24.61■■□□□ 1.53
SH2D3A-204ENST00000595681 CCDC85CA6NKD9 419 aa24.6■■□□□ 1.53
SH2D3A-204ENST00000595681 FLOT1O75955 427 aa24.6■■□□□ 1.53
SH2D3A-204ENST00000595681 ERVK-9P63128 1117 aa24.6■■□□□ 1.53
SH2D3A-204ENST00000595681 ERVK-24P63145 666 aa24.6■■□□□ 1.53
SH2D3A-204ENST00000595681 PRKCZQ05513 592 aa24.6■■□□□ 1.53
SH2D3A-204ENST00000595681 SAMD1Q6SPF0 538 aaPredicted RBP24.6■■□□□ 1.53
SH2D3A-204ENST00000595681 STX8Q9UNK0 236 aa24.6■■□□□ 1.53
SH2D3A-204ENST00000595681 TAF6LQ9Y6J9 622 aa24.6■■□□□ 1.53
SH2D3A-204ENST00000595681 TNPO2O14787 897 aaKnown RBP24.59■■□□□ 1.53
SH2D3A-204ENST00000595681 LBX2Q6XYB7 198 aa24.59■■□□□ 1.53
SH2D3A-204ENST00000595681 LSG1Q9H089 658 aaKnown RBP24.59■■□□□ 1.53
SH2D3A-204ENST00000595681 PORCNQ9H237 461 aa24.59■■□□□ 1.53
SH2D3A-204ENST00000595681 RNF41Q9H4P4 317 aaPredicted RBP24.59■■□□□ 1.53
SH2D3A-204ENST00000595681 RLFQ13129 1914 aa24.59■■□□□ 1.53
SH2D3A-204ENST00000595681 GNRH1P01148 92 aa24.59■■□□□ 1.53
SH2D3A-204ENST00000595681 CYP21A2P08686 494 aa24.59■■□□□ 1.53
SH2D3A-204ENST00000595681 NOVP48745 357 aa24.59■■□□□ 1.53
SH2D3A-204ENST00000595681 KIAA1211Q6ZU35 1233 aa24.59■■□□□ 1.53
SH2D3A-204ENST00000595681 RASGRP2Q7LDG7 609 aa24.59■■□□□ 1.53
SH2D3A-204ENST00000595681 MAP4K1Q92918 833 aa24.59■■□□□ 1.53
SH2D3A-204ENST00000595681 ATG4CQ96DT6 458 aa24.59■■□□□ 1.53
SH2D3A-204ENST00000595681 ZKSCAN3Q9BRR0 538 aa24.59■■□□□ 1.53
SH2D3A-204ENST00000595681 ANO2Q9NQ90 1003 aa24.59■■□□□ 1.53
SH2D3A-204ENST00000595681 RABGAP1Q9Y3P9 1069 aa24.59■■□□□ 1.53
SH2D3A-204ENST00000595681 RBM8AQ9Y5S9 174 aaKnown RBP24.59■■□□□ 1.53
SH2D3A-204ENST00000595681 U3KPZ7 1027 aaPredicted RBP24.59■■□□□ 1.53
SH2D3A-204ENST00000595681 B4E1Z4 1266 aa24.58■■□□□ 1.53
SH2D3A-204ENST00000595681 DSG3P32926 999 aa24.58■■□□□ 1.53
SH2D3A-204ENST00000595681 GTF3C2Q8WUA4 911 aaPredicted RBP24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms