RNA–Protein interactions for RNA: ENST00000595081.5

PNKP-205, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 513 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-205ENST00000595081 ZKSCAN3Q9BRR0 538 aa27.02■■□□□ 1.92
PNKP-205ENST00000595081 ASCC2Q9H1I8 757 aaPredicted RBP27.02■■□□□ 1.92
PNKP-205ENST00000595081 PABPC4Q13310 644 aaKnown RBP eCLIP27.01■■□□□ 1.91
PNKP-205ENST00000595081 RPAP3Q9H6T3 665 aaPredicted RBP27.01■■□□□ 1.91
PNKP-205ENST00000595081 GOPCQ9HD26 462 aa27.01■■□□□ 1.91
PNKP-205ENST00000595081 TCP11L1Q9NUJ3 509 aa27.01■■□□□ 1.91
PNKP-205ENST00000595081 ZSWIM5Q9P217 1185 aa27.01■■□□□ 1.91
PNKP-205ENST00000595081 ADGRA2Q96PE1 1338 aa27■■□□□ 1.91
PNKP-205ENST00000595081 GPR25O00155 361 aa27■■□□□ 1.91
PNKP-205ENST00000595081 REC8O95072 547 aa27■■□□□ 1.91
PNKP-205ENST00000595081 OSBPP22059 807 aa27■■□□□ 1.91
PNKP-205ENST00000595081 HOXA7P31268 230 aaPredicted RBP27■■□□□ 1.91
PNKP-205ENST00000595081 LPAR1Q92633 364 aa27■■□□□ 1.91
PNKP-205ENST00000595081 MKL1Q969V6 931 aa27■■□□□ 1.91
PNKP-205ENST00000595081 PNMA3Q9UL41 463 aa27■■□□□ 1.91
PNKP-205ENST00000595081 TLR2O60603 784 aa26.99■■□□□ 1.91
PNKP-205ENST00000595081 IRX3P78415 501 aaPredicted RBP26.99■■□□□ 1.91
PNKP-205ENST00000595081 TRDNQ13061 729 aa26.99■■□□□ 1.91
PNKP-205ENST00000595081 CYB5R4Q7L1T6 521 aa26.99■■□□□ 1.91
PNKP-205ENST00000595081 CPA4Q9UI42 421 aa26.99■■□□□ 1.91
PNKP-205ENST00000595081 MYH4Q9Y623 1939 aa26.98■■□□□ 1.91
PNKP-205ENST00000595081 USP17L15C9J2P7 530 aa26.98■■□□□ 1.91
PNKP-205ENST00000595081 USP17L13C9JLJ4 530 aa26.98■■□□□ 1.91
PNKP-205ENST00000595081 USP17L11C9JVI0 530 aa26.98■■□□□ 1.91
PNKP-205ENST00000595081 USP17L18D6R9N7 530 aa26.98■■□□□ 1.91
PNKP-205ENST00000595081 USP17L22D6RA61 530 aa26.98■■□□□ 1.91
PNKP-205ENST00000595081 USP17L17D6RBQ6 530 aa26.98■■□□□ 1.91
PNKP-205ENST00000595081 USP17L19D6RCP7 530 aa26.98■■□□□ 1.91
PNKP-205ENST00000595081 USP17L20D6RJB6 530 aa26.98■■□□□ 1.91
PNKP-205ENST00000595081 F5H6K3 240 aa26.98■■□□□ 1.91
PNKP-205ENST00000595081 NDUFB10O96000 172 aa26.98■■□□□ 1.91
PNKP-205ENST00000595081 NOVP48745 357 aa26.98■■□□□ 1.91
PNKP-205ENST00000595081 NT5C2P49902 561 aa26.98■■□□□ 1.91
PNKP-205ENST00000595081 KLRC3Q07444 240 aa26.98■■□□□ 1.91
PNKP-205ENST00000595081 USP17L24Q0WX57 530 aa26.98■■□□□ 1.91
PNKP-205ENST00000595081 PPP4R3BQ5MIZ7 849 aa26.98■■□□□ 1.91
PNKP-205ENST00000595081 RALYLQ86SE5 291 aaKnown RBP26.98■■□□□ 1.91
PNKP-205ENST00000595081 SMCR8Q8TEV9 937 aaPredicted RBP26.98■■□□□ 1.91
PNKP-205ENST00000595081 RNF20Q5VTR2 975 aa26.97■■□□□ 1.91
PNKP-205ENST00000595081 RCSD1Q6JBY9 416 aa26.97■■□□□ 1.91
PNKP-205ENST00000595081 CATSPERGQ6ZRH7 1159 aa26.97■■□□□ 1.91
PNKP-205ENST00000595081 NCOA7Q8NI08 942 aa26.97■■□□□ 1.91
PNKP-205ENST00000595081 ZNF296Q8WUU4 475 aaPredicted RBP26.97■■□□□ 1.91
PNKP-205ENST00000595081 NUP88Q99567 741 aaPredicted RBP26.97■■□□□ 1.91
PNKP-205ENST00000595081 P2RX7Q99572 595 aaKnown RBP26.97■■□□□ 1.91
PNKP-205ENST00000595081 TANGO6Q9C0B7 1094 aa26.97■■□□□ 1.91
PNKP-205ENST00000595081 WDR46O15213 610 aaKnown RBP26.96■■□□□ 1.91
PNKP-205ENST00000595081 C17orf99Q6UX52 265 aa26.96■■□□□ 1.91
PNKP-205ENST00000595081 IQCA1Q86XH1 822 aa26.96■■□□□ 1.91
PNKP-205ENST00000595081 RASEFQ8IZ41 740 aa26.96■■□□□ 1.91
PNKP-205ENST00000595081 CHMP4CQ96CF2 233 aa26.96■■□□□ 1.91
PNKP-205ENST00000595081 ZSCAN10Q96SZ4 725 aaPredicted RBP26.96■■□□□ 1.91
PNKP-205ENST00000595081 SYNPO2Q9UMS6 1093 aa26.96■■□□□ 1.91
PNKP-205ENST00000595081 COL9A3Q14050 684 aaPredicted RBP26.95■■□□□ 1.9
PNKP-205ENST00000595081 NOM1Q5C9Z4 860 aaKnown RBP26.95■■□□□ 1.9
PNKP-205ENST00000595081 FAM83BQ5T0W9 1011 aa26.95■■□□□ 1.9
PNKP-205ENST00000595081 GMCL1P1Q8NEA9 526 aa26.95■■□□□ 1.9
PNKP-205ENST00000595081 TMEM47Q9BQJ4 181 aa26.95■■□□□ 1.9
PNKP-205ENST00000595081 TOP1P11387 765 aaKnown RBP26.94■■□□□ 1.9
PNKP-205ENST00000595081 HERVK_113P62684 666 aa26.94■■□□□ 1.9
PNKP-205ENST00000595081 SLFN13Q68D06 897 aa26.94■■□□□ 1.9
PNKP-205ENST00000595081 CHST3Q7LGC8 479 aa26.94■■□□□ 1.9
PNKP-205ENST00000595081 MB21D2Q8IYB1 491 aaPredicted RBP26.94■■□□□ 1.9
PNKP-205ENST00000595081 ENAHQ8N8S7 591 aaPredicted RBP26.94■■□□□ 1.9
PNKP-205ENST00000595081 UBAC1Q9BSL1 405 aa26.94■■□□□ 1.9
PNKP-205ENST00000595081 MTMR7Q9Y216 660 aa26.94■■□□□ 1.9
PNKP-205ENST00000595081 TNKSO95271 1327 aa26.93■■□□□ 1.9
PNKP-205ENST00000595081 FKTNO75072 461 aa26.93■■□□□ 1.9
PNKP-205ENST00000595081 BCRP11274 1271 aa26.93■■□□□ 1.9
PNKP-205ENST00000595081 HSPA4P34932 840 aa26.93■■□□□ 1.9
PNKP-205ENST00000595081 RASGRP2Q7LDG7 609 aa26.93■■□□□ 1.9
PNKP-205ENST00000595081 TTC14Q96N46 770 aa26.93■■□□□ 1.9
PNKP-205ENST00000595081 PRDM10Q9NQV6 1147 aa26.93■■□□□ 1.9
PNKP-205ENST00000595081 CASP8AP2Q9UKL3 1982 aa26.92■■□□□ 1.9
PNKP-205ENST00000595081 PEX10O60683 326 aa26.92■■□□□ 1.9
PNKP-205ENST00000595081 ANTXR2P58335 489 aa26.92■■□□□ 1.9
PNKP-205ENST00000595081 SP3Q02447 781 aa26.92■■□□□ 1.9
PNKP-205ENST00000595081 CCDC178Q5BJE1 867 aa26.92■■□□□ 1.9
PNKP-205ENST00000595081 DGKHQ86XP1 1220 aa26.92■■□□□ 1.9
PNKP-205ENST00000595081 ANKRD13CQ8N6S4 541 aa26.92■■□□□ 1.9
PNKP-205ENST00000595081 USP26Q9BXU7 913 aa26.92■■□□□ 1.9
PNKP-205ENST00000595081 FBXO28Q9NVF7 368 aa26.92■■□□□ 1.9
PNKP-205ENST00000595081 FLOT1O75955 427 aa26.91■■□□□ 1.9
PNKP-205ENST00000595081 ZKSCAN1P17029 563 aaPredicted RBP26.91■■□□□ 1.9
PNKP-205ENST00000595081 MCCP23508 829 aa26.91■■□□□ 1.9
PNKP-205ENST00000595081 POTEEQ6S8J3 1075 aa26.91■■□□□ 1.9
PNKP-205ENST00000595081 SAMD1Q6SPF0 538 aaPredicted RBP26.91■■□□□ 1.9
PNKP-205ENST00000595081 SPDYE16A6NNV3 312 aaPredicted RBP26.9■■□□□ 1.9
PNKP-205ENST00000595081 ECM2O94769 699 aaPredicted RBP26.9■■□□□ 1.9
PNKP-205ENST00000595081 GCLCP48506 637 aaPredicted RBP26.9■■□□□ 1.9
PNKP-205ENST00000595081 COG2Q14746 738 aa26.9■■□□□ 1.9
PNKP-205ENST00000595081 ADCK5Q3MIX3 580 aa26.9■■□□□ 1.9
PNKP-205ENST00000595081 ANKS1AQ92625 1134 aa26.9■■□□□ 1.9
PNKP-205ENST00000595081 KCNB2Q92953 911 aa26.9■■□□□ 1.9
PNKP-205ENST00000595081 ISY1Q9ULR0 285 aaKnown RBP26.9■■□□□ 1.9
PNKP-205ENST00000595081 IFIT3O14879 490 aaKnown RBP26.89■■□□□ 1.9
PNKP-205ENST00000595081 CAP1Q01518 475 aa26.89■■□□□ 1.9
PNKP-205ENST00000595081 SEC23AQ15436 765 aa26.89■■□□□ 1.9
PNKP-205ENST00000595081 TSGA10IPQ3SY00 556 aa26.89■■□□□ 1.9
PNKP-205ENST00000595081 CD99L2Q8TCZ2 262 aa26.89■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms