RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 ZFPM1Q8IX07 1006 aa4.02□□□□□ -1.77
VRK3-204ENST00000593912 CCAR1Q8IX12 1150 aaKnown RBP4.02□□□□□ -1.77
VRK3-204ENST00000593912 PROCA1Q8NCQ7 364 aaPredicted RBP4.02□□□□□ -1.77
VRK3-204ENST00000593912 GPRC5AQ8NFJ5 357 aa4.02□□□□□ -1.77
VRK3-204ENST00000593912 TDRD7Q8NHU6 1098 aaKnown RBP4.02□□□□□ -1.77
VRK3-204ENST00000593912 SCLYQ96I15 445 aa4.02□□□□□ -1.77
VRK3-204ENST00000593912 SUGCTQ9HAC7 445 aa4.02□□□□□ -1.77
VRK3-204ENST00000593912 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.02□□□□□ -1.77
VRK3-204ENST00000593912 XPNPEP3Q9NQH7 507 aa4.02□□□□□ -1.77
VRK3-204ENST00000593912 STARD7Q9NQZ5 370 aa4.02□□□□□ -1.77
VRK3-204ENST00000593912 TMOD2Q9NZR1 351 aa4.02□□□□□ -1.77
VRK3-204ENST00000593912 RBPJLQ9UBG7 517 aa4.02□□□□□ -1.77
VRK3-204ENST00000593912 ZMIZ1Q9ULJ6 1067 aa4.02□□□□□ -1.77
VRK3-204ENST00000593912 FAM50BQ9Y247 325 aa4.02□□□□□ -1.77
VRK3-204ENST00000593912 PCDHGC5Q9Y5F6 944 aa4.02□□□□□ -1.77
VRK3-204ENST00000593912 DMXL2Q8TDJ6 3036 aa4.02□□□□□ -1.77
VRK3-204ENST00000593912 IGF2RP11717 2491 aa4.01□□□□□ -1.77
VRK3-204ENST00000593912 TNKSO95271 1327 aa4.01□□□□□ -1.77
VRK3-204ENST00000593912 MYO7AQ13402 2215 aa4.01□□□□□ -1.77
VRK3-204ENST00000593912 COL11A1P12107 1806 aaPredicted RBP4.01□□□□□ -1.77
VRK3-204ENST00000593912 MBTPS2O43462 519 aa4.01□□□□□ -1.77
VRK3-204ENST00000593912 KRT38O76015 456 aa4.01□□□□□ -1.77
VRK3-204ENST00000593912 IGHA2P01877 340 aa4.01□□□□□ -1.77
VRK3-204ENST00000593912 LMNAP02545 664 aaKnown RBP4.01□□□□□ -1.77
VRK3-204ENST00000593912 LTBRP36941 435 aa4.01□□□□□ -1.77
VRK3-204ENST00000593912 CTSWP56202 376 aa4.01□□□□□ -1.77
VRK3-204ENST00000593912 IRX3P78415 501 aaPredicted RBP4.01□□□□□ -1.77
VRK3-204ENST00000593912 RING1Q06587 406 aa4.01□□□□□ -1.77
VRK3-204ENST00000593912 CHRNDQ07001 517 aa4.01□□□□□ -1.77
VRK3-204ENST00000593912 DLX2Q07687 328 aaPredicted RBP4.01□□□□□ -1.77
VRK3-204ENST00000593912 SPP2Q13103 211 aa4.01□□□□□ -1.77
VRK3-204ENST00000593912 NBPF20Q3BBV1 942 aa4.01□□□□□ -1.77
VRK3-204ENST00000593912 APOBEC3HQ6NTF7 200 aaKnown RBP4.01□□□□□ -1.77
VRK3-204ENST00000593912 ZNF804AQ7Z570 1209 aa4.01□□□□□ -1.77
VRK3-204ENST00000593912 PLBD2Q8NHP8 589 aa4.01□□□□□ -1.77
VRK3-204ENST00000593912 FAM151AQ8WW52 585 aa4.01□□□□□ -1.77
VRK3-204ENST00000593912 POP1Q99575 1024 aaKnown RBP4.01□□□□□ -1.77
VRK3-204ENST00000593912 RSPH6AQ9H0K4 717 aa4.01□□□□□ -1.77
VRK3-204ENST00000593912 WNT8AQ9H1J5 351 aa4.01□□□□□ -1.77
VRK3-204ENST00000593912 PANK3Q9H999 370 aa4.01□□□□□ -1.77
VRK3-204ENST00000593912 CLDND1Q9NY35 253 aa4.01□□□□□ -1.77
VRK3-204ENST00000593912 LMCD1Q9NZU5 365 aa4.01□□□□□ -1.77
VRK3-204ENST00000593912 LHX6Q9UPM6 363 aa4.01□□□□□ -1.77
VRK3-204ENST00000593912 R4GN57 208 aa4.01□□□□□ -1.77
VRK3-204ENST00000593912 LAMA5O15230 3695 aa4.01□□□□□ -1.77
VRK3-204ENST00000593912 IGSF10Q6WRI0 2623 aa4.01□□□□□ -1.77
VRK3-204ENST00000593912 HECTD1Q9ULT8 2610 aa4.01□□□□□ -1.77
VRK3-204ENST00000593912 CDK5RAP2Q96SN8 1893 aa4.01□□□□□ -1.77
VRK3-204ENST00000593912 MYADML2A6NDP7 307 aa4□□□□□ -1.77
VRK3-204ENST00000593912 FAM196BA6NMK8 535 aa4□□□□□ -1.77
VRK3-204ENST00000593912 CNMDO75829 334 aa4□□□□□ -1.77
VRK3-204ENST00000593912 KCNA4P22459 653 aa4□□□□□ -1.77
VRK3-204ENST00000593912 PTPREP23469 700 aa4□□□□□ -1.77
VRK3-204ENST00000593912 CDK7P50613 346 aa4□□□□□ -1.77
VRK3-204ENST00000593912 NUBP1P53384 320 aa4□□□□□ -1.77
VRK3-204ENST00000593912 ACLYP53396 1101 aa4□□□□□ -1.77
VRK3-204ENST00000593912 MMRN1Q13201 1228 aa4□□□□□ -1.77
VRK3-204ENST00000593912 PABPC4Q13310 644 aaKnown RBP eCLIP4□□□□□ -1.77
VRK3-204ENST00000593912 TCEAL5Q5H9L2 206 aa4□□□□□ -1.77
VRK3-204ENST00000593912 PPM1JQ5JR12 505 aa4□□□□□ -1.77
VRK3-204ENST00000593912 FKBP1CQ5VVH2 108 aa4□□□□□ -1.77
VRK3-204ENST00000593912 DEFB128Q7Z7B8 93 aa4□□□□□ -1.77
VRK3-204ENST00000593912 RNF180Q86T96 592 aa4□□□□□ -1.77
VRK3-204ENST00000593912 RPAINQ86UA6 219 aa4□□□□□ -1.77
VRK3-204ENST00000593912 HERC6Q8IVU3 1022 aa4□□□□□ -1.77
VRK3-204ENST00000593912 FAM126BQ8IXS8 530 aa4□□□□□ -1.77
VRK3-204ENST00000593912 TTLL11Q8NHH1 800 aa4□□□□□ -1.77
VRK3-204ENST00000593912 CYP2W1Q8TAV3 490 aa4□□□□□ -1.77
VRK3-204ENST00000593912 TEKT1Q969V4 418 aa4□□□□□ -1.77
VRK3-204ENST00000593912 PABPC5Q96DU9 382 aaKnown RBP4□□□□□ -1.77
VRK3-204ENST00000593912 RIPOR3Q96MK2 946 aa4□□□□□ -1.77
VRK3-204ENST00000593912 HIPK3Q9H422 1215 aa4□□□□□ -1.77
VRK3-204ENST00000593912 FAM198AQ9UFP1 575 aa4□□□□□ -1.77
VRK3-204ENST00000593912 IQSEC3Q9UPP2 1182 aaPredicted RBP4□□□□□ -1.77
VRK3-204ENST00000593912 AKAP13Q12802 2813 aa4□□□□□ -1.77
VRK3-204ENST00000593912 TET1Q8NFU7 2136 aa4□□□□□ -1.77
VRK3-204ENST00000593912 ANKRD17O75179 2603 aaKnown RBP3.99□□□□□ -1.77
VRK3-204ENST00000593912 SLC15A5A6NIM6 579 aa3.99□□□□□ -1.77
VRK3-204ENST00000593912 C1QTNF9BB2RNN3 333 aa3.99□□□□□ -1.77
VRK3-204ENST00000593912 TAF4O00268 1085 aa3.99□□□□□ -1.77
VRK3-204ENST00000593912 ADAMTS4O75173 837 aa3.99□□□□□ -1.77
VRK3-204ENST00000593912 PCCAP05165 728 aaPredicted RBP3.99□□□□□ -1.77
VRK3-204ENST00000593912 PROS1P07225 676 aa3.99□□□□□ -1.77
VRK3-204ENST00000593912 HOXC6P09630 235 aa3.99□□□□□ -1.77
VRK3-204ENST00000593912 C1QTNF9P0C862 333 aa3.99□□□□□ -1.77
VRK3-204ENST00000593912 RARBP10826 455 aa3.99□□□□□ -1.77
VRK3-204ENST00000593912 TAL1P17542 331 aaPredicted RBP3.99□□□□□ -1.77
VRK3-204ENST00000593912 IGHMBP2P38935 993 aaKnown RBP3.99□□□□□ -1.77
VRK3-204ENST00000593912 GYG1P46976 350 aa3.99□□□□□ -1.77
VRK3-204ENST00000593912 CHAF1AQ13111 956 aaPredicted RBP3.99□□□□□ -1.77
VRK3-204ENST00000593912 GRB14Q14449 540 aa3.99□□□□□ -1.77
VRK3-204ENST00000593912 ANGPT1Q15389 498 aa3.99□□□□□ -1.77
VRK3-204ENST00000593912 KCNA10Q16322 511 aa3.99□□□□□ -1.77
VRK3-204ENST00000593912 KRT24Q2M2I5 525 aa3.99□□□□□ -1.77
VRK3-204ENST00000593912 SOWAHCQ53LP3 525 aaPredicted RBP3.99□□□□□ -1.77
VRK3-204ENST00000593912 C15orf52Q6ZUT6 534 aaKnown RBP3.99□□□□□ -1.77
VRK3-204ENST00000593912 SH3BP5LQ7L8J4 393 aa3.99□□□□□ -1.77
VRK3-204ENST00000593912 ZNF280CQ8ND82 737 aa3.99□□□□□ -1.77
VRK3-204ENST00000593912 VTI1AQ96AJ9 217 aa3.99□□□□□ -1.77
VRK3-204ENST00000593912 ZDHHC15Q96MV8 337 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms