RNA–Protein interactions for RNA: ENST00000593267.2

CACNA1A-213, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 2

Gene CACNA1A, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-213ENST00000593267 MIGA2Q7L4E1 593 aa13.44□□□□□ -0.26
CACNA1A-213ENST00000593267 CLEC10AQ8IUN9 316 aa13.44□□□□□ -0.26
CACNA1A-213ENST00000593267 ZC3H15Q8WU90 426 aaKnown RBP13.44□□□□□ -0.26
CACNA1A-213ENST00000593267 HOOK2Q96ED9 719 aa13.44□□□□□ -0.26
CACNA1A-213ENST00000593267 KANSL2Q9H9L4 492 aa13.44□□□□□ -0.26
CACNA1A-213ENST00000593267 FOXN1O15353 648 aa13.43□□□□□ -0.26
CACNA1A-213ENST00000593267 DTNBO60941 627 aa13.43□□□□□ -0.26
CACNA1A-213ENST00000593267 BRD1O95696 1058 aa13.43□□□□□ -0.26
CACNA1A-213ENST00000593267 GH2P01242 217 aa13.43□□□□□ -0.26
CACNA1A-213ENST00000593267 PDIA4P13667 645 aaKnown RBP13.43□□□□□ -0.26
CACNA1A-213ENST00000593267 FDPSP14324 419 aaKnown RBP13.43□□□□□ -0.26
CACNA1A-213ENST00000593267 SYT1P21579 422 aa13.43□□□□□ -0.26
CACNA1A-213ENST00000593267 CAP2P40123 477 aa13.43□□□□□ -0.26
CACNA1A-213ENST00000593267 ICA1Q05084 483 aa13.43□□□□□ -0.26
CACNA1A-213ENST00000593267 PKP1Q13835 747 aa13.43□□□□□ -0.26
CACNA1A-213ENST00000593267 SEPT2Q15019 361 aa13.43□□□□□ -0.26
CACNA1A-213ENST00000593267 NBPF12Q5TAG4 269 aaPredicted RBP13.43□□□□□ -0.26
CACNA1A-213ENST00000593267 DCAF15Q66K64 600 aa13.43□□□□□ -0.26
CACNA1A-213ENST00000593267 CTCFLQ8NI51 663 aaPredicted RBP13.43□□□□□ -0.26
CACNA1A-213ENST00000593267 MKL1Q969V6 931 aa13.43□□□□□ -0.26
CACNA1A-213ENST00000593267 DCPSQ96C86 337 aaKnown RBP13.43□□□□□ -0.26
CACNA1A-213ENST00000593267 CABP5Q9NP86 173 aa13.43□□□□□ -0.26
CACNA1A-213ENST00000593267 ZBTB21Q9ULJ3 1066 aa13.43□□□□□ -0.26
CACNA1A-213ENST00000593267 KIF3AQ9Y496 699 aa13.43□□□□□ -0.26
CACNA1A-213ENST00000593267 OTOFQ9HC10 1997 aa13.43□□□□□ -0.26
CACNA1A-213ENST00000593267 FMNL1O95466 1100 aaPredicted RBP13.42□□□□□ -0.26
CACNA1A-213ENST00000593267 SNHG28P0DPA3 235 aa13.42□□□□□ -0.26
CACNA1A-213ENST00000593267 PDCP20941 246 aa13.42□□□□□ -0.26
CACNA1A-213ENST00000593267 KIF5BP33176 963 aa13.42□□□□□ -0.26
CACNA1A-213ENST00000593267 CTCFP49711 727 aaPredicted RBP13.42□□□□□ -0.26
CACNA1A-213ENST00000593267 VEGFBP49765 207 aa13.42□□□□□ -0.26
CACNA1A-213ENST00000593267 FUT2Q10981 343 aa13.42□□□□□ -0.26
CACNA1A-213ENST00000593267 TMTC3Q6ZXV5 915 aa13.42□□□□□ -0.26
CACNA1A-213ENST00000593267 NBPF11Q86T75 865 aa13.42□□□□□ -0.26
CACNA1A-213ENST00000593267 PNMA8AQ86V59 439 aaPredicted RBP13.42□□□□□ -0.26
CACNA1A-213ENST00000593267 SIAH1Q8IUQ4 282 aa13.42□□□□□ -0.26
CACNA1A-213ENST00000593267 DDX11Q96FC9 970 aa13.42□□□□□ -0.26
CACNA1A-213ENST00000593267 GINM1Q9NU53 330 aa13.42□□□□□ -0.26
CACNA1A-213ENST00000593267 CLIP2Q9UDT6 1046 aa13.42□□□□□ -0.26
CACNA1A-213ENST00000593267 MAD2L2Q9UI95 211 aa13.42□□□□□ -0.26
CACNA1A-213ENST00000593267 ZNF112Q9UJU3 913 aa13.42□□□□□ -0.26
CACNA1A-213ENST00000593267 SYNPO2Q9UMS6 1093 aa13.42□□□□□ -0.26
CACNA1A-213ENST00000593267 ZDHHC9Q9Y397 364 aa13.42□□□□□ -0.26
CACNA1A-213ENST00000593267 CNTNAP5Q8WYK1 1306 aa13.41□□□□□ -0.26
CACNA1A-213ENST00000593267 PHIPQ8WWQ0 1821 aa13.41□□□□□ -0.26
CACNA1A-213ENST00000593267 PALM3A6NDB9 673 aaPredicted RBP13.41□□□□□ -0.26
CACNA1A-213ENST00000593267 STX6O43752 255 aa13.41□□□□□ -0.26
CACNA1A-213ENST00000593267 PLEKHA8P1O95397 391 aa13.41□□□□□ -0.26
CACNA1A-213ENST00000593267 ITGBL1O95965 494 aaPredicted RBP13.41□□□□□ -0.26
CACNA1A-213ENST00000593267 PDHBP11177 359 aa13.41□□□□□ -0.26
CACNA1A-213ENST00000593267 EEF2P13639 858 aaKnown RBP13.41□□□□□ -0.26
CACNA1A-213ENST00000593267 LARP1BQ659C4 914 aaKnown RBP13.41□□□□□ -0.26
CACNA1A-213ENST00000593267 SULF1Q8IWU6 871 aa13.41□□□□□ -0.26
CACNA1A-213ENST00000593267 LRRC47Q8N1G4 583 aaKnown RBP13.41□□□□□ -0.26
CACNA1A-213ENST00000593267 FAM184AQ8NB25 1140 aa13.41□□□□□ -0.26
CACNA1A-213ENST00000593267 RGS22Q8NE09 1264 aa13.41□□□□□ -0.26
CACNA1A-213ENST00000593267 RNF26Q9BY78 433 aaPredicted RBP13.41□□□□□ -0.26
CACNA1A-213ENST00000593267 ZNF341Q9BYN7 854 aa13.41□□□□□ -0.26
CACNA1A-213ENST00000593267 PRDM10Q9NQV6 1147 aa13.41□□□□□ -0.26
CACNA1A-213ENST00000593267 ORC3Q9UBD5 711 aaPredicted RBP13.41□□□□□ -0.26
CACNA1A-213ENST00000593267 MYH15Q9Y2K3 1946 aa13.41□□□□□ -0.26
CACNA1A-213ENST00000593267 WDR33Q9C0J8 1336 aaKnown RBP13.4□□□□□ -0.26
CACNA1A-213ENST00000593267 ADM5C9JUS6 153 aa13.4□□□□□ -0.26
CACNA1A-213ENST00000593267 CTNND1O60716 968 aaKnown RBP13.4□□□□□ -0.26
CACNA1A-213ENST00000593267 ASNSP08243 561 aa13.4□□□□□ -0.26
CACNA1A-213ENST00000593267 GNAQP50148 359 aa13.4□□□□□ -0.26
CACNA1A-213ENST00000593267 SSRP1Q08945 709 aaKnown RBP13.4□□□□□ -0.26
CACNA1A-213ENST00000593267 SUPT20HL1Q3ZLR7 823 aa13.4□□□□□ -0.26
CACNA1A-213ENST00000593267 PRAMEF18Q5VWM3 479 aa13.4□□□□□ -0.26
CACNA1A-213ENST00000593267 MAP1SQ66K74 1059 aaPredicted RBP13.4□□□□□ -0.26
CACNA1A-213ENST00000593267 RASGRP2Q7LDG7 609 aa13.4□□□□□ -0.26
CACNA1A-213ENST00000593267 GMCL1P1Q8NEA9 526 aa13.4□□□□□ -0.26
CACNA1A-213ENST00000593267 PHKBQ93100 1093 aa13.4□□□□□ -0.26
CACNA1A-213ENST00000593267 PRPF3O43395 683 aaKnown RBP13.39□□□□□ -0.27
CACNA1A-213ENST00000593267 PPFIA3O75145 1194 aa13.39□□□□□ -0.27
CACNA1A-213ENST00000593267 DEXIO95424 95 aa13.39□□□□□ -0.27
CACNA1A-213ENST00000593267 PARP1P09874 1014 aaKnown RBP13.39□□□□□ -0.27
CACNA1A-213ENST00000593267 ASPRV1Q53RT3 343 aa13.39□□□□□ -0.27
CACNA1A-213ENST00000593267 KRT26Q7Z3Y9 468 aa13.39□□□□□ -0.27
CACNA1A-213ENST00000593267 TRIM22Q8IYM9 498 aa13.39□□□□□ -0.27
CACNA1A-213ENST00000593267 STAG2Q8N3U4 1231 aa13.39□□□□□ -0.27
CACNA1A-213ENST00000593267 SRBD1Q8N5C6 995 aaKnown RBP13.39□□□□□ -0.27
CACNA1A-213ENST00000593267 LZTS2Q9BRK4 669 aa13.39□□□□□ -0.27
CACNA1A-213ENST00000593267 SLC26A6Q9BXS9 759 aa13.39□□□□□ -0.27
CACNA1A-213ENST00000593267 ARHGEF10LQ9HCE6 1279 aa13.39□□□□□ -0.27
CACNA1A-213ENST00000593267 MTMR6Q9Y217 621 aa13.39□□□□□ -0.27
CACNA1A-213ENST00000593267 A0A1W2PRG0 241 aa13.38□□□□□ -0.27
CACNA1A-213ENST00000593267 USP17L5A8MUK1 530 aa13.38□□□□□ -0.27
CACNA1A-213ENST00000593267 ZSCAN22P10073 491 aaPredicted RBP13.38□□□□□ -0.27
CACNA1A-213ENST00000593267 SMARCA1P28370 1054 aa13.38□□□□□ -0.27
CACNA1A-213ENST00000593267 ATP2B2Q01814 1243 aa13.38□□□□□ -0.27
CACNA1A-213ENST00000593267 ZNF543Q08ER8 600 aa13.38□□□□□ -0.27
CACNA1A-213ENST00000593267 DEFB115Q30KQ5 88 aa13.38□□□□□ -0.27
CACNA1A-213ENST00000593267 USP17L2Q6R6M4 530 aa13.38□□□□□ -0.27
CACNA1A-213ENST00000593267 CLEC17AQ6ZS10 378 aa13.38□□□□□ -0.27
CACNA1A-213ENST00000593267 CDC37L1Q7L3B6 337 aa13.38□□□□□ -0.27
CACNA1A-213ENST00000593267 CMTR1Q8N1G2 835 aaKnown RBP13.38□□□□□ -0.27
CACNA1A-213ENST00000593267 DCAF4Q8WV16 495 aa13.38□□□□□ -0.27
CACNA1A-213ENST00000593267 WASF1Q92558 559 aa13.38□□□□□ -0.27
CACNA1A-213ENST00000593267 TNPO1Q92973 898 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms